Acidithiobacillus ferrivorans: Acife_2366
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Entry
Acife_2366 CDS
T01595
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
afi
Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_2366
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Acife_2366
Archaeal homologous recombinant proteins
Acife_2366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
cobW
NTPase_1
MG1
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AEM48463
UniProt:
G0JP48
LinkDB
All DBs
Position
complement(2356272..2359943)
Genome browser
AA seq
1223 aa
AA seq
DB search
MRIQQVRFKNLNSLVGEWSIDFTHPAYTSEGIFAITGPTGAGKTTILDAICLALYGRTPR
LNKVTKGTNEIMSRQTGECFAEVTFATQTGQYRCHWSQHRARKKPDGELQNPKHEIADAR
SGSLLESSLKGVSDRIETATGMGFEQFTRSMLLAQGGFAAFLQAAADERAPILEQITGTE
IYSEISVRVHERRTVERNALERMEAELEGMRLLRPEEEQGLNDSLAQKTQQEAKLTAEIA
RTQEIIRWLDSIAQLETDLQQIAGQKVNLQVRVTAFAPEQERLTQANKALELEADYTALQ
SLRHAQETDAANHREKQAILPEHVEVFRQATEAERMVLVQLEASKTAQQQALPLIRQVRE
LDLKIREKEAPVRVASDAIAAYEQSLKALRVKQDTDLREQERLQNIFAVLTQQLADTQAD
AGLVEHLAGMRARMEAVQQVYGQWREKGRAIQQTEEALATAVRSWQEGTEGRSRAEIALN
DRQKEEAEKQLSFKDLLEGEELPEWRDRLDTLKDQGVVLAKIQDAAQIIAQTTQHLETLE
VHQASLLAKNATLDARLIAELAQKTTHDHTVSLLETQITLLNRIESLEAMRHQLEDGEVC
PLCGATEHPFAEGNIPHFDETRQALIAAKTAQDANAEEITALKVKQAEQGKELERLHAEQ
QYAATQRAAAQDLIAANGQVFAPLQAEDPQLTDQVQTLRDEHGAALERAHGIVRRADAAE
KALAELRISLDQAKTAFVKADREFESAQHQKVSLEKSLEQIKEDALSLSTQQEQYLAVLS
GNLATYSVAPVSLDALDQIQADLSERRVQWLRRQEEKGDLVVKRAALEAQIRHQGEEMLK
LDGETQKQQKQLKMLRVEQQAWKDQRRALFGDKNPADEERHLSDAIVSAENTLENLRQRM
YTAQQKLVLLQESVANLVVGIEERKPRLEAAEATFASRLLKAEFASEVQFLSTRLPEDER
KKLANAAFQLKDEASVLNAMEQEKNTLLATERQKQITDAPKDTVSQILSDLMVNHRNMQQ
EIGGLSQRLKDNAALKEQQQGRGEAIAAQKRECGRWDLLHDLIGSSDGKKYRNFAQGLTF
ELMVSHANRQLQKMTDRYLLVRDGRQPLELNVIDNYQAGEVRSTKNLSGGESFIVSLALA
LGLSHMASKNVRVDSLFLDEGFGTLDEEALDMALETLAGLQQEGKLIGVISHVAALKERI
GTQIQVIPRTGGRSTIFGPGCIF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatacaacaagtacgcttcaaaaatctgaactctctggtgggtgagtggagcatt
gattttacccatcccgcctacacctcagagggcatttttgccatcaccgggcctactggt
gcggggaagacgacgatcctcgacgccatttgtctggcgctgtacggacgcaccccccgc
ctgaacaaggttaccaagggcaccaatgaaattatgtcccgccagacgggcgagtgtttt
gccgaagtgacctttgccacgcagactggtcagtaccgctgtcattggagccagcaccgg
gcgcgcaagaagcccgatggcgaattgcagaacccgaagcatgaaattgccgatgcacgg
tcaggcagcttactggagtcctcactcaaaggggtgtccgaccggattgagacagctacg
ggcatgggcttcgagcaattcactcgctccatgctgctggctcagggcggattcgccgcc
ttcctgcaagccgctgccgatgagcgtgcgccgattctggagcaaatcacgggaacggag
atttacagcgagatatctgtccgtgtccatgaacggcgtactgtagagcgtaacgcactg
gagcgaatggaggcggaactggaaggcatgcggctcttgcgtccggaggaagagcaaggg
ctgaacgacagtctggcgcaaaagacccagcaggaggcgaagttgactgcagaaattgcc
cggacgcaggagataatccgctggctggacagtatcgcgcaactggaaacggatctgcag
cagatcgccgggcaaaaagtgaatttgcaggtcagagtcactgcctttgcccctgaacag
gagagactgacgcaggcaaataaggcactcgaactggaagcggattataccgccttgcag
tcgcttcgccatgcgcaagagacagatgcggcgaaccatcgagagaagcaggccatcctg
ccggaacatgtggaagtcttccgtcaggctaccgaggcggagcgcatggttttagtgcaa
ctggaagccagcaagacagcgcagcaacaggccctgccccttatccggcaggtgcgcgaa
ctggatctcaaaatccgtgaaaaagaagcacctgttcgagtggcttccgacgccatcgcc
gcgtatgagcaatctctgaaagcgctccgcgtgaagcaggataccgatctcagggaacag
gaacgtctgcaaaacatctttgcggtcctcacgcaacagttggcagacacgcaagcagat
gcagggctggtggagcatcttgccggtatgcgggcacggatggaggcggtgcagcaggtg
tatgggcagtggcgggagaaaggcagggcgatacagcagacggaggaggccttagcgacg
gcagttcgctcatggcaggaggggacggaggggcgcagtagagccgaaatcgcgctgaat
gaccggcaaaaagaagaggccgaaaaacagctatcctttaaggaccttctggagggagag
gaactcccagagtggcgtgaccgcctggacactctcaaggatcagggtgttgttctggca
aaaatacaggatgccgcccaaatcatcgcgcagacgacgcagcacctggaaactctagaa
gtgcatcaggcctcactgctcgcgaaaaatgcgacactggacgcacgccttatagccgaa
ctggcgcagaaaacgacccacgaccacacggtttccctgctggaaacccagatcacgctc
ctcaaccggatagaaagtctggaggcaatgcgtcatcaattagaggacggcgaggtctgc
ccgctctgcggcgcaacagagcatcccttcgcggagggaaatattccgcactttgacgaa
acccgccaagccctgattgctgccaaaactgcgcaggatgccaacgcagaagagattacg
gcgctgaaggtgaaacaggctgagcagggcaaagaactggagcggttgcacgctgagcag
caatatgcggctacgcaacgggctgccgcacaggacctgattgctgccaatgggcaggtt
ttcgccccgctacaagcagaggatccccaactgacagaccaggtgcagactttgcgggac
gaacatggcgctgccttagagcgtgcgcatggtatcgtgcgtcgcgcagacgctgcggaa
aaggcattggcagaattacgcatctccctggatcaggccaagacggcgtttgtgaaggca
gaccgggagtttgagtcagcgcagcatcaaaaggtgtccctcgaaaaatctctggaacag
atcaaagaggacgccctatcgctctctacccaacaggagcaatacctggcggttttatcc
ggaaatctggcgacttatagtgtcgcccctgtttctctggatgccctggatcagattcag
gcagatttaagcgaacggcgcgtccaatggctacgccgacaagaagaaaaaggtgacctc
gttgtgaagcgcgccgcactggaggcgcagatacgccatcagggcgaggagatgttgaag
ttggatggggagacccaaaagcaacagaaacagctcaaaatgctacgagtggaacagcag
gcatggaaagatcagcgtcgtgcgctttttggtgataaaaatcccgcagacgaggaaagg
catctttccgatgcaatcgtgtctgccgagaacacactcgaaaatttgcggcagcggatg
tatacggcgcaacagaaactggtcttactccaggagagcgtggcaaacctcgtggtaggc
atcgaagaaagaaaaccccgattagaggctgctgaagccacttttgcgagtcgtttgctg
aaggcggagttcgccagcgaagtgcaattcttatcgacccgtctgccggaggatgagcgt
aaaaaactggcaaatgccgcgttccaactgaaggacgaagcgtcggtgctcaatgccatg
gagcaagaaaaaaataccctgctggcgacagagcggcaaaagcagatcaccgatgcacca
aaagatacagtcagtcagatattgagcgatctcatggtgaatcaccggaatatgcagcaa
gagatcggcggtctttctcaaagactcaaggataacgccgcactgaaagagcagcagcaa
gggaggggcgaggccatcgcggcgcagaagcgcgagtgcgggcgttgggatctgctccac
gatctcatcggttccagcgatggcaagaaataccgcaattttgcccaaggtctgactttt
gaactgatggtcagccacgctaaccggcaactgcaaaaaatgaccgaccgctatctgctg
gtccgcgatggcaggcaaccgctggaactcaatgtgatcgataactatcaggccggggag
gtgcgttccaccaaaaacctctcgggtggagagagctttatcgtcagcctggcgctggcg
ctgggcctctcgcacatggccagtaaaaatgtgcgggtggattccctgtttctggatgaa
ggtttcggcactctggatgaggaagccttggatatggccctggaaactcttgcgggtctc
cagcaggaaggcaagctcattggcgtgatttcccatgtggctgctctcaaagagcgtatt
ggcacccagattcaagtgataccgagaacggggggaagaagtaccatattcgggcctggt
tgcatattttag
DBGET
integrated database retrieval system
