Acidithiobacillus ferrivorans: Acife_2646
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Entry
Acife_2646 CDS
T01595
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Acife_2646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afi03019
]
Acife_2646
03016 Transfer RNA biogenesis [BR:
afi03016
]
Acife_2646
Enzymes [BR:
afi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Acife_2646
Messenger RNA biogenesis [BR:
afi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Acife_2646
Transfer RNA biogenesis [BR:
afi03016
]
Prokaryotic type
tRNA degradation factors
Acife_2646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_TP0910
KH_2
OB_RRP5_4th
OB_PDCD11
aRib
Motif
Other DBs
NCBI-ProteinID:
AEM48724
UniProt:
G0JR78
LinkDB
All DBs
Position
complement(2629815..2631893)
Genome browser
AA seq
692 aa
AA seq
DB search
MTIIRKEVDFGGRRLQLETGRMARQADGAVLVSSGDTVVLVTAVARREMKPGQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPAEKETLTSRLIDRPIRPLFPKGFMNEVQVIATVLSVD
RDNDPDILALVGASAALAISGIPFNGPIGAARVGYIDGQYVLNPSYSQLSSSQLDLVVSG
TRQAVLMVESEAQQLSEEIMLEAVMFGHAQFQPVIETIEALAREAGKSRWEWVAPVADAA
LGALVREKATPLLQEAYALMDKQARSKRLEEVQQSMAIAFAAEDAQRGDLVRGLLKKIET
SIVRGRILDGAPRIDGRDSRTVRPITIEAGVLPRTHGSALFTRGETQALVVATLGTKGDE
QIIDALQGESRDRFMLHYNFPPFSTGETGMVGSPKRREIGHGRLAKRAIAAVLPSNSEFP
YSLRVVSEVLESNGSSSMATVCGASLALMDAGVPLKAPVAGVAMGLIKEGDRFAVLTDIL
GDEDHLGDMDFKVAGTEQGVTALQMDIKIDGITREIMAQALKQALAGRLHILGLMNGVLS
MSRGELSDYAPRIITIQINPDRIRDVIGPGGKVIRALTEETGATIDIQDNGTVTIASVDG
EAGAAAKRRIELLTADVQVDTIYDGKVAKIMDFGAFVTILPGRDGLLHISQISSERVSDV
HDHLKEGQAVRVKVLEVDRQGKIKLSMKDIPQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttgaccattattcggaaagaagtagattttggcggtcgtcgcctgcagctggaaacgggc
cgaatggcacgccaggcagatggtgcggtactggtttctagcggggatacagtcgttctg
gtaacggcagtggcccgccgggagatgaagccgggccaggatttctttccgttaacggtg
aactatcaggaaaaggcctatgcagcgggcaaaattcctggtggcttctttaagcgtgaa
gggcggcccgctgaaaaagagacgctgacttcacgtctgatcgatcgtcccatccggccg
ctctttcccaagggctttatgaacgaagtgcaggttatcgccacggtattgtcagtggat
cgggataatgatcccgatatcttggcgttggtcggtgcttcagcggccctggcgatttcc
ggcattccgttcaatggtccgattggtgcggcccgggtgggttatatcgacggacaatat
gtgctgaaccccagttactcgcaactgagtagctcgcagctggatctcgtggtgtcaggg
acccggcaggcggtactcatggtggagtctgaggcgcagcaattgtccgaagaaatcatg
ctggaagcggtgatgttcgggcacgcgcagttccagccggtcattgagacgattgaggcc
ctggcgcgggaagccggtaaatcgcgctgggagtgggtggcgccggtggccgatgcggca
ctgggcgcgctggtgcgcgagaaagccaccccgctcttgcaggaggcttatgccctgatg
gataagcaggcacgcagcaagcgcctggaagaagtgcagcagtcgatggcgatagccttt
gccgcagaagatgcacagcgcggcgatctggttcgtggcctgttgaaaaaaattgaaacc
agcattgtgcgcggccgcattttggatggcgcgccacgcattgatggtcgggacagcagg
acggtgcgtcccatcaccattgaggcgggcgtgttgccgcggacccacggttcggcgctc
tttacccggggcgaaacccaggccttggtggtggcgactttgggcaccaagggcgatgag
cagatcattgatgccctgcaaggggagagtcgtgatcgttttatgctgcattataacttt
ccacctttctctaccggtgagacgggcatggtaggctcccccaaacgtcgggaaatcggt
cacgggcgcctggcgaagcgggcgatagcggcggtcctgccaagtaacagcgaattcccg
tacagtttgcgggtggtgtctgaagtgctggagtccaatggttcttccagcatggcgacg
gtctgtggtgcctccctggcgctgatggatgccggtgtgcccctcaaggcgccggtggcg
ggtgtggccatgggcctcatcaaggaaggcgaccgctttgccgtcctcaccgatatcctg
ggtgacgaagatcatctgggtgatatggatttcaaggtggcgggcaccgaacagggggtg
accgccctgcagatggatatcaagatcgacgggattacccgggaaatcatggcacaggcg
ctcaagcaggcgctggccgggcggctgcatatccttgggctgatgaatggcgtgctgtct
atgagccgtggcgagctgtctgactatgcaccgcgtattatcaccatccagatcaatccg
gatcgcattcgcgatgtcattggaccgggcggcaaggtcatccgcgccctgaccgaagaa
acgggtgcgaccattgatattcaggacaacggtacggtaactattgcttctgtggatggt
gaagccggcgccgcagcgaagcggcgtatcgaattgctgacggcggatgtgcaggttgat
accatttatgatggcaaagtggccaagatcatggattttggtgcctttgtgacgatcctg
ccgggacgggatggcttgctgcacatttcccagatcagcagcgagcgggtcagtgacgtc
cacgatcacctcaaggaagggcaggcagtgcgtgtcaaggtcctggaagtggatcgtcag
ggcaagatcaaactgagtatgaaggatatcccgcaataa
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