Acidithiobacillus ferrivorans: Acife_2648
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Entry
Acife_2648 CDS
T01595
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
afi
Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afi03016
]
Acife_2648
Enzymes [BR:
afi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Acife_2648
Transfer RNA biogenesis [BR:
afi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Acife_2648
Prokaryotic type
Acife_2648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEM48726
UniProt:
G0JR80
LinkDB
All DBs
Position
complement(2632212..2633096)
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AA seq
294 aa
AA seq
DB search
MNCQHGLLLFDKPAGLTSNAALQRVKRLFGIKKAGHTGSLDPIATGLLVLLFGEATKVSD
YILNADKSYRATLRLGQTTTTGDSEGEILEERPVTASEEQVRMVLPQFSGVIAQIPPMYS
AIKQGGKPLYELARKGLEVERAARQVRIDALDLILLDGDCLVLDVRCSKGTYIRSLAADI
GAALGCGAHVNGLRRTSTGPFDIAQALTLEALAEVLGREECPLKAMDLALEYLPAVTLTE
NTAYYLRQGQGVVVAHTPASLGRIRLYGPMGQFLGLGEVMDDGKVAPRRLMSVN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtcaacatggtctgctactctttgataaacctgcgggactgacgtccaatgcg
gccttgcagcgggttaaacgcctgttcggcattaaaaaagccgggcatacgggaagcctc
gatcccatcgctaccgggctgctggtcttgctctttggtgaggctaccaaagtctctgat
tatattctcaacgcggacaagtcctatcgagcaactttgcgtttggggcaaaccacgaca
accggtgacagcgaaggagaaattctcgaagagcggccggttaccgccagcgaggagcag
gtgcgtatggtcttgccgcagttttccggtgtgatcgcgcaaatcccgcctatgtattca
gcgatcaagcagggtggcaagccgctgtacgagctggcgcgcaagggcctggaagtggag
cgggcggcacgccaggtacggatcgatgcgctcgacctgattttgttggacggtgactgt
ttggtgctggatgtgcgctgttctaagggtacctatatccgcagtctggcagcagacatc
ggtgcagcactggggtgtggtgcgcatgtcaatggattacggcggacctctaccggtcct
tttgatattgcgcaggcgttgaccctggaagcgcttgctgaggtgctcgggcgtgaggag
tgcccgcttaaagccatggatctggctttagaatatttgccggcggtgactctgacggag
aacaccgcctattacctgcgtcagggacagggggtcgtggttgcccatacacctgcttcc
cttgggcgcattcgcctctatggaccgatgggccagttcctcggtttgggagaggttatg
gacgacggaaaggtggcgcctcgccgcctcatgagcgtaaactag
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