Acidithiobacillus ferrivorans: Acife_2683
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Entry
Acife_2683 CDS
T01595
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Acife_2683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afi03021
]
Acife_2683
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_2683
Enzymes [BR:
afi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Acife_2683
Transcription machinery [BR:
afi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Acife_2683
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Acife_2683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEM48760
UniProt:
G0JRB4
LinkDB
All DBs
Position
complement(2671554..2672573)
Genome browser
AA seq
339 aa
AA seq
DB search
MTEVGELLRPQGVDVEEVSVHRARIALGPLERGFGHTLGSGLRRVLLSSLKGAAVTEVEI
EGVLHEYSSIEGVQEDVVDILLNLKMLAVRAHGRGDAVVTLRKRGPGQMTGADIVSEHGI
EVANPDQVIATLTRDVELVLHLRIDEGRGYDAAATRRQSHEKRIGVMALDASFSPVLRVS
YLVESARVEQRTDLDRLILDVETNGVVDPIWAVQEASRIFRSQLGVLAGAEVKDIPEASL
VQANESLTPLLVRPVDDLELTVRSANCLKAEDIFYIGDLVQKSEQELLKAPNLGRKSLNE
IKEVLVAHGLALGMRLDNWPPENLPPVPGRSADADSISS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggtaggagagctgttgcgtccacagggcgttgatgtggaagaggtttcagtg
caccgtgcgcgtattgccctcggccccctggagcgtggctttggtcacaccttgggtagt
gggttgcgccgggtgttgttatcgtctctcaaaggtgcggcggttacagaggttgagatt
gaaggggtgttgcatgagtattccagcatcgaaggggtgcaggaagatgttgtggatatt
ctgctcaacttgaagatgctggcagtgcgagcacatgggcgcggagacgcagtggtgacg
ttgcgtaaacgtggtcccggtcaaatgacgggtgcggatatcgtgtctgaacacggcatt
gaggtagcgaaccctgatcaggtaattgcgactttgacccgcgacgttgagctggtgctc
catttgcgtattgacgaaggtcggggctatgacgcggctgccacgcgtcgtcagagccat
gaaaagcgcattggcgtcatggctctggatgcaagtttcagtcctgtattgcgcgtaagc
tacctggtggaaagtgctcgggtagagcagcggaccgatctggatcgcctgatactcgat
gtcgagaccaatggcgtggtcgacccgatttgggccgtacaggaggcctcccgtattttt
cgcagtcagctcggtgtgttggctggtgcggaagtcaaggatatccctgaggcgtcactg
gtgcaggccaatgagagccttacgcccttgttagttcggccggttgatgacttggagctt
acggtgcgctcggcgaactgtttgaaagccgaggatattttttatattggtgatttggtt
cagaagtcggagcaggagcttttgaaagcccccaatcttggacgcaagtcgctgaacgag
ataaaggaagttttagtggcccatggccttgcgttggggatgcggctcgacaattggcca
ccggaaaatttgcccccggtgcctgggcggtcagctgatgcggattctatcagcagttaa
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