Amphiura filiformis: 140135438
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Entry
140135438 CDS
T10871
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140135438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140135438
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140135438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
ANAPC3
Motif
Other DBs
NCBI-GeneID:
140135438
NCBI-ProteinID:
XP_072013036
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All DBs
Position
16:4570679..4613844
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AA seq
828 aa
AA seq
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MDPEGFGDLLRDAEQLTADVDSGGELPRVERNLRQIMETSERLWTKTAQVGAPDAADVKA
SILLGSKGLDVPRISHRLETLSAAKTFEPLEPVADTDIQGFLRNERENALLSVIEETKRN
TYEQAERRFWDSMRNEWETEKQRILNTLIGSGQDLIDIAPETENLSRDGVSMEGRSAMDS
MEMAYARQVYVYNDSVVHGGVRPNLIQLFEHVGQQFEDKRIANMWAMVREMTSLPLQTSA
NPIIARTTQEMQVAFVKQAKGFLEQSYLKYISTIISENLQQAQVGGIPGTYHLVHGFLKV
RLPQFIPGFEDGDVDGHPVWPVVYYCLRCGDLEAALDTVQRAAQDLGEFQEYLTEYMQSD
ERRLSPSTETKLRLHYRRAVRNSTDPYKRAVYCVIGCCDTMENHTEVADKTEDYLWLKLS
QVRVTEDPGPGTPADRLALPQLQTMLFEEYGENHFSAHQNPFLYFEVLFLSAQFEAAIEF
LSRSDLSLRCHAVHIAISLHELGLLAMSDNIQAQLLSKDVDDPAPMRRINFARLISLYTS
KFEATDPREALQYFYILRNLKDSQGENLFVKCLSELVIETREFEALLGCLDRNGTRRPGA
VDKFQTNTQKIIETVARDTEAKGLFEDALKLYDLARNTDKVLEILNRLLSPVVSSPNSHQ
STRERLQRLAVAIAERYADQALSANQSTTKSFHLLLDLMTFFDQYHARDMDRALTTMQQL
YLVPLSPESVDDRVNSFKQYTDEIRRNLPDVLLATMKILYTKYKSTRSASHHRTRPRTPH
RPEDGGQEGHLVDLRRQAKALITFAGMLPYRMPGDTNARLVQMEVLMN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggacccagaaggttttggagacctgcttcgtgatgctgaacagctcacagcagatgta
gatagtggtggcgaactaccacgtgtggagcgcaatttgcgtcagattatggaaaccagc
gaaaggctctggacaaagactgcccaagttggggcacctgatgctgcggatgtcaaggct
tctatcctattaggctccaagggccttgatgttcctaggatttcacatagactagaaaca
ctgagtgctgcaaagacatttgaacctttggaaccagtagctgacactgatatccaggga
tttttacgcaacgaaagagaaaatgctctactctctgtgattgaggagaccaagaggaat
acctacgagcaagctgagaggcgtttctgggacagcatgcgtaatgagtgggagacagag
aagcagaggatactcaacacattgattggttccggtcaagatttaattgatattgcacct
gaaactgagaacctgtcaagagatggggtgtctatggaaggaaggagtgccatggatagc
atggaaatggcttatgccagacaggtgtatgtatacaatgacagtgttgttcatggtgga
gtcagacccaatctaattcaactctttgaacatgttggacagcagtttgaagataagcgt
attgccaatatgtgggccatggttcgtgaaatgacttcattaccactgcagacttcagct
aatccaatcatagcaaggaccacacaggaaatgcaagttgcatttgtcaagcaggccaag
ggcttcttggaacaaagttatttgaaatacatcagtactatcatcagtgagaatttacag
caagctcaagttggtggtataccaggcacctatcatctggttcatggattcctaaaagtc
aggcttcctcaattcataccaggatttgaggatggagatgttgatgggcatccagtatgg
cctgtagtctactattgtttaagatgtggtgacttggaagcagctttggatacagtacaa
agagcagcgcaagacttgggtgaatttcaggagtatctgacagaatacatgcaaagtgat
gaaagaaggttatcaccatcaacagaaacaaaacttagactgcactacagacgagctgtc
agaaatagcacagatccttacaaaagggctgtatactgtgtgataggatgctgtgataca
atggagaatcacacagaggttgcagacaagacagaggattacttgtggctcaagctgagc
caagtccgcgtcacagaagatcctggccctggtacacctgcagatcgcctcgccctacca
cagctacagaccatgctctttgaagagtacggggagaaccacttcagtgcccatcagaac
ccgttcctctactttgaagttctattcctatcagcacagtttgaagcagctattgagttc
ttatcaaggtctgatttatcactgagatgccatgcggtacacattgctatatcacttcat
gagctaggattactggccatgtcagacaacatccaagcacaactcttaagcaaagatgta
gatgacccagcaccgatgaggcgaatcaactttgcccgtctcatcagtttatacacatcc
aaatttgaagccactgatcccagagaagcactacaatacttctatatactaaggaatctt
aaagactctcaaggtgaaaacctgtttgtcaagtgcctgagtgaattggtgattgagact
agagagtttgaggctctcctgggatgtctagacagaaatggcacacgccgtcctggagca
gtagacaaattccagaccaacacacagaagattatagagacagttgctagggatacagaa
gctaaagggttgtttgaagatgcattgaaactgtatgatttggcaaggaacacagacaag
gtacttgagatattaaatcgcctgctaagcccagtggtgtcatctcctaacagtcatcaa
tccaccagagaaagactacaaagattagcggtagcaatcgcagaaagatatgcagaccag
gctctgagtgcaaaccaatccactactaaatcattccatcttctcttagatctcatgaca
ttctttgatcaataccatgcaagggacatggatagagcactgacgactatgcagcaactg
tacctagtaccactcagcccagaatcagtggatgatagagtcaactccttcaaacaatac
acagatgagatccgacgtaatctacccgatgtgttactagcgaccatgaagatcctgtat
accaaatacaaatcaacaagatctgcttcacatcacagaactagacccaggacaccacac
aggccagaggatggagggcaagaagggcacttggttgaccttcgtagacaagccaaagct
ctcatcacatttgctggtatgctcccatacagaatgccaggtgacaccaacgccagactc
gtccagatggaagtcctcatgaactaa
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