Amphiura filiformis: 140135807
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Entry
140135807 CDS
T10871
Name
(RefSeq) low-density lipoprotein receptor-related protein 12-like isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140135807
Membrane trafficking [BR:
afil04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
140135807
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
CDCP1_CUB_6
CUB_2
Motif
Other DBs
NCBI-GeneID:
140135807
NCBI-ProteinID:
XP_072013529
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Position
16:26493253..26525233
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AA seq
895 aa
AA seq
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MEQIEQKILLFFAAVSLLFQLPVVQSDRTCGTSDRHGPDGEITSPNYPDNYPPLVACKWH
IKPGPDEVVTISFKFFDIEESNGCTSDSLEISDGGSKSTGLLCGNQLPQPYISAKGVSVT
VRFRSDLLVLRHGFLLEYITGEEPATRLCDQDSEFRCSNGKCIPINWTCNGMDECGDGTD
ESNFVCHAETTQRLPPITNPGTVTTKHPPPSGMTTEYPCPTHTFYCISAETQQPTCFPEI
QKCDGHKDCATGEDEAYCETVCNHLLQTPSNSGYFFSPNYPNHYDANLDCYWIITVTDGN
VIQLRFKDFDLEYGYSTDYVSVYDGEGTFTHVHSQDKIGTYYGSGFSPKNPHGPPVVIES
SGNRMTVNLHTDGKANDKGFNATYQTKGDCIEGQQLCSADDQNCFNENEKCDGIFTCLKG
NDELGCGSCREDQIPCNIEESSSNCYSTKNRCNGERQCPNKEDELNCPPELCNTAKGLFL
CTNKQCIQENWMCDGSSDCSDDSDELNCRMSTNVITAATVGSIICGLLLVAALSCTCKLY
QLRVVDRHPPTHISPLREIEDELMRREAPPSYTATISSPHFDQAQRAFIEGIQAAVIARQ
DTNSTTNRERQQPRPRSALMRMLSNEGLPETAGLPNQNDASTVPNEDDANPNAGLGSEEN
AIEEAPSQTDRGNADGESTTESMQIINTESNDIQMPVISSSSTPCVEPSPVVGTASVDTA
TSEAPRAPPSESNSCCTSDTDSDTNQEAFEIEQREQNIIRAAANIRRMRLAGGLQNVIEE
AQRNGGRSPPVDEQNENTNNSSHESEDNDDAPLDLETSPSDSMALQPTNQEEPTPSESAT
QNAETDSKDTSETREVNEVEEPLMVASNMQICDDDVPLLLSQPSMELTNVNESEA
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaacagattgaacaaaaaatactgctcttctttgctgcggtttccttactcttccaa
ctcccagtggtgcaaagtgacagaacttgtggaacttctgatcggcatggaccagatggt
gaaataacaagtcccaattatccagataattatccaccactcgtagcatgtaaatggcat
ataaaacctggacctgatgaggtagttactataagttttaaatttttcgacattgaagaa
agtaatggatgcaccagcgactcgctggaaatcagcgatgggggatccaaatctacaggt
ctgttatgtggcaaccagctacctcagccatacatatcagcaaagggcgtctcagtgact
gtgaggtttagatctgacttacttgtattacgtcatggcttccttctagagtacattaca
ggtgaagagccagccacaagactatgtgaccaagattcagaatttcgatgcagcaatggc
aaatgtattccaatcaactggacatgtaatggcatggatgaatgtggagatgggacggat
gaaagtaactttgtctgccatgcagaaactacacaacggttgccacctataaccaaccca
ggcaccgtcacaaccaagcacccacctcccagcggaatgaccacagagtacccatgtccg
acacatacattctactgtatatccgccgaaacacagcaaccgacatgctttccggaaatc
caaaaatgtgacggacacaaagactgtgccacgggcgaggacgaggcctattgtgaaact
gtctgcaaccatctgctgcagactccaagtaactctgggtactttttctcgcccaattat
ccaaatcactacgatgcaaatctggactgttattggattatcacggtgactgatggcaac
gttatacagttgcgattcaaagattttgatttggagtatgggtacagtacggactatgtg
agtgtgtacgacggtgagggtacatttacgcatgtacattcacaggataaaattggcact
tattatggctccggcttttcacccaagaatcctcatggtccacccgtcgtcattgagtct
tctggtaatcgtatgacagtcaacctgcacacagacggcaaggctaatgacaaaggattt
aatgctacttaccagacgaaaggtgactgtatagaaggccaacagctctgcagtgctgat
gatcagaattgcttcaatgagaatgaaaaatgtgatggtatattcacatgcttgaaaggc
aacgatgaactagggtgcggtagttgtcgtgaggaccaaatcccctgcaacattgaagaa
tcctcaagcaactgctactcaacaaaaaaccgatgcaatggtgaacgccagtgccccaac
aaagaagacgagttaaactgtccgccagaactgtgcaatacagccaaggggttattcctc
tgtactaataaacagtgtattcaagagaactggatgtgtgatgggtcgtcggactgttcg
gatgatagcgacgaattgaactgccgaatgtctaccaatgtaatcactgcagcaacagta
gggtctatcatctgtggactccttctagtagcagctctaagctgtacatgcaaactctac
caactgcgtgtcgtagataggcatccaccaacgcacatctcaccactccgggaaatagaa
gacgaactaatgcgccgtgaagcgccaccatcgtacacagccacaatatcatctcctcac
tttgatcaagctcagagagcgtttattgaaggtattcaagcagctgtaatagcaagacaa
gacacaaatagtacaacgaacagagaaaggcaacaacctcgtcccaggagtgctttaatg
cgaatgttatcaaacgaagggttgcccgaaacagctggattgccaaaccaaaatgatgca
agtacagtaccaaatgaagatgatgccaatccaaatgcaggtcttgggagtgaggagaat
gcgattgaagaagctccctcacaaactgatagaggtaatgccgatggtgaaagtacgact
gaatctatgcaaattataaacactgaaagtaatgacatacaaatgcctgttataagtagt
agtagcactccatgtgtagaaccaagtcctgttgttggcacagcatctgttgacacagcg
accagtgaagcacctagagcgcccccatccgaatcaaacagctgctgtacaagtgacaca
gactcggacacaaatcaagaagcgtttgaaatagagcagcgagagcaaaatattatacgt
gcggcggcaaacatacggcgcatgcggttagccggtgggttgcaaaatgtgatagaggaa
gcgcaaagaaatggtggtaggagtccaccggtagatgaacagaatgaaaacactaataat
tcatctcatgaaagtgaggacaatgatgatgcaccacttgatctagaaacatcaccttcg
gattcaatggcgctacaaccaaccaatcaggaagaacctacaccttcagaatcagccact
cagaatgctgaaactgattcaaaagacactagcgaaacgagagaggttaatgaagtggaa
gagcctctgatggtagcatcaaatatgcaaatttgcgatgatgatgttcctcttcttcta
tctcagcctagtatggaattaactaatgttaacgaatcagaagcataa
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