Amphiura filiformis: 140135838
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Entry
140135838 CDS
T10871
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
afil Amphiura filiformis
Pathway
afil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140135838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140135838
03036 Chromosome and associated proteins [BR:
afil03036
]
140135838
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140135838
Coactivators
SAGA/TFTC/STAGA complex
140135838
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140135838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
PPR_long
Motif
Other DBs
NCBI-GeneID:
140135838
NCBI-ProteinID:
XP_072013578
LinkDB
All DBs
Position
16:complement(28644519..28674395)
Genome browser
AA seq
723 aa
AA seq
DB search
MSNVLGGNLPTTVKNVAPGQVLSHSMRIAGHQMIAPRPGAPSGQIQVRLPPGTNLPPNVV
LINNKDGSLQAVQVGGTIAQSGAVPGTVTYRHVQPGGSQQQLIAPRAPTPTIIHQPHHQQ
QFITHSAAGKPGTPVVVSVTKPGQPNMTMVYTSSGGQRTVGPVTIGVPSSQSPMQMSQPV
VTHVPQQPSTSSGTPATVQIPMSQSAIENVKKCKNFLTTLIKLASNANQAPETVQNVKDL
VQNLIDGRIEPEGFTQKLQKELHSSPQPYLVPFLKKSLPLLRQTLQRSGATTLQGINPQS
LQSAGTAATPTSVKPSKAATVTVGSSSKHIIAGSSAGGSGGKTATINISAQQLEQIAARG
GKAGLAQLQQLAQKAKAQGQPPGQLVTTTIGGQTKTIFLPHSAILGAQAQVQAAQAAAAA
ASTGKSGATPKTSSGSSKPRSGGTPSRSKDKGKDHAAAAASFKDDDDINDVASMAGVNLS
EESARIMATNADFIGTQMRSIKEEKFLIQDPLHDHINRLCQKHGLQNASSEVMDLISLAT
QERLKLLTEKLCTIAAHRMEAYRNDSRFEVTTDIKTQLKVFEQLDSLERKRREEQEREIL
MRAAKSRSKQEDPEQLKLKQRAKEMQQMELEQMRQKEANLTALAAIGSRKKRKVDSPTPG
SVPGGPGQATGSSFLTNLSTPSSTSRRRPMPRIKRVNLRDVLFLLEQEREMKKSQLLFKS
FLK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgttttaggtggcaatttgccaacaactgtaaaaaatgtagcacctggccag
gttttatctcattcaatgaggatagctgggcaccaaatgattgcaccgaggcctggagca
ccctcgggacagattcaggtgcggcttcctccaggaacaaatttgccacctaatgtagta
ttgataaacaataaagatggcagtttacaagcagtgcaagttggtggtactattgcacag
tcaggagcagtaccaggcactgtgacttatagacatgtacagcctggcggctctcagcag
cagctaatagcacctagagctccaacgcctaccataattcaccagcctcatcatcagcag
caattcatcacacacagtgcagcagggaaacctggcacacccgtcgtagtcagcgtcacc
aaacctggacaaccgaacatgacaatggtgtatacctcatcgggaggccaaagaactgta
ggccctgttactataggggtaccctcctcccagtccccgatgcaaatgtcgcagccggtg
gtgacacatgtaccacaacagccgagtacttcatcagggacaccggccacagtgcaaatt
ccaatgtctcagtctgccattgagaatgtaaagaagtgcaagaacttcctaacgacgctg
attaagttggcgtccaatgctaaccaggctccggaaactgtgcaaaatgtcaaggatttg
gtgcaaaatctaattgatggcagaatagaaccagaaggatttacacagaaacttcaaaag
gaattgcactcatcaccccagccatacctggtgccatttcttaagaaaagcttgccatta
ctgcgtcagactttacagagatcaggcgccaccactctccaaggtatcaatccacagtcg
ctccagtctgccggaacagcagccacccctacctcggtcaagccgtctaaggctgccacc
gtcactgttgggtcgtcgtcgaagcacatcatagcaggcagctcggcaggtgggtcgggc
ggcaagacggcaacgatcaacatctcggcgcagcagctggagcagattgcggcgagaggc
ggtaaagctgggttggctcagttgcagcagttagctcaaaaagctaaagcacagggtcag
cctccaggtcagctagtgaccacaactataggtggtcagactaagaccatcttcctaccc
catagcgcaatcttaggtgcccaagcccaggtccaggcggctcaagcagccgccgcagca
gcatcaacggggaagtctggtgctacgccaaagacatcgtcaggttctagcaaaccaagg
tccggaggaacgccgtcacgctcaaaggacaaaggcaaagatcatgctgctgctgctgca
tcattcaaggatgatgatgacatcaacgatgttgcctccatggcaggtgtcaacctgtcg
gaggagagtgcccgcatcatggcaaccaatgctgatttcatcgggacacagatgagatcc
atcaaggaagagaaatttcttattcaggatcccttacatgaccatattaatagattatgt
caaaaacatggtttacaaaacgcctcatctgaagtgatggaccttatctcattagctacg
caggagagactcaaattacttacagaaaaattgtgtactatcgctgctcatagaatggaa
gcatataggaatgattccaggtttgaggtcactaccgatattaaaacgcagcttaaagta
tttgaacaacttgactcattagaaagaaagagaagagaagaacaagaaagagaaatactg
atgagagctgcaaagagccggtctaagcaagaggatcctgagcagctgaaactgaagcag
agagccaaggagatgcaacagatggaactagaacaaatgagacaaaaagaagcgaatttg
acggcgttggcagccattggctctcgtaagaagaggaaagttgactcgcctacacctggg
agcgtaccaggtggtccaggacaggcaactggaagttctttcttaactaatttgtcaaca
ccaagctctacatctaggaggagaccgatgcctagaatcaagagggtcaatctcagagat
gtgttattcctactggagcaggaaagagaaatgaagaaatcacagctgctatttaaatcc
tttttgaaataa
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