Amphiura filiformis: 140135871
Help
Entry
140135871 CDS
T10871
Name
(RefSeq) tonsoku-like protein
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afil03000
]
140135871
03400 DNA repair and recombination proteins [BR:
afil03400
]
140135871
Transcription factors [BR:
afil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
140135871
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140135871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
TPR_12
Ank
Ank_4
TPR_7
Ank_3
Ank_5
LRR_6
LRR_4
TPR_2
TPR_MalT
TPR_1
TPR_8
LRR_8
TPR_3
DUF2225
Motif
Other DBs
NCBI-GeneID:
140135871
NCBI-ProteinID:
XP_072013622
LinkDB
All DBs
Position
16:complement(31065916..31104351)
Genome browser
AA seq
1525 aa
AA seq
DB search
MNPHDKKEFKRLEKAKFKAQANGKLKEESELCNVLGELLARNGEYEDAIREHKQELQLSE
SLQDVIGSAVANRKIGECYSALEEYQTALRYQKRHLQLAQSVDNHVEEQRAFATIGRTYL
CQGENSQGDKASEALNKAQQAFLKSLGVCDKLRGSISEKEVMEMRARLFLNLGLVFDNKQ
DFKNSAKFIKQAIFISEKHNLLEDLYRSQFAQGDIYQRCGEHSKGLRSLENAMQTAKKLK
DKSKESETLACMANIYFQLCDFQAAKRVLKKAYKMGSQVMRDKDVIARHLRAAIKGCQLQ
RQLQELPDDAETETVSLFEALGDLCCKVSSFTKAVEYYKKQLKCALSLKKPSKELIVIYV
SLAATYADNKQYEKAIQMYRKELELRAGNFKEEGKTWLNIADAQEKANYDSEAIQKSYSE
ALNCAKQAKHPQLQLRTLKSLSLVHQKYGQEHMYSAMKRKIRSLREDHDLASDDDDVSGE
EDEGGEPNTEQSDSMDVDDDIILSESDDSAAEEEYDVPTASERVKRNKFAKRNEKGETLL
HRACIDGNLKQVKRLIEQGHPRNPRDNCGWIPLHEACNFGFYEIAEFLLDHGADINDRGG
EGCGGITPLHDAIDGGNFEVADLLINKGANVLAKNDEGKSAIDNLMRWKDTYERDIDEET
MVRCRHTQGLLNKAITEGANRKIKPSRPRNIMEDPELFDKEEGYSQVQRSQGLSQRSTDM
GRTTFTSKNRSISDLVTKKFSSNNQRTKQSLQPAQRRSSFIDLDTDEPSDSGRDATESFS
SQESTSGSALSQDSMPDMVCHKRSRVQRLEVEVSTPEDESQESDEIHLGNSRGGVGSNGL
NESSNIEDFEEEAEHQNNERSLDIDDPINARHSYRSAISRIGSAASRLSQQTFELPLTRS
SSTNDGPAMISEEEYTAGDDWLIDDVGMQPTKRKRVDIDGTFSTSTSRSQVSKHFETRTN
SSSSSRSRLSRKRKPRQTKLTSLVAQIGRIPSIIQEKDEEDISNTSSDVEMIPESPVESR
VPDFPQRNNVSLSQQTQEQRPPAVVGGTVMRIKVKIQDKMFLIPIPTRDERSMNWLAEEA
GRRYYNSCGLKPKLVLCTQEGAEFSPDDMVTDLLTNNEEVLGKVDQWDLPPLLERYKRAC
ENAKTKEHPLIRGSIQLSQNTSTLTLANHALSSNHCTPLFLALQCQYSLKKLLLPGNRIG
DSAISSLIGALGTLPNLSHLDLSGNEISQEGLKVFHEVLCGGRALEGQGVVARAGGGDNQ
KILQMLEELNLGYNPLSDACALYVSSLVKHCPLLAKLGLQSCDLSMKFFQLHRRALTEAF
QGATNLHTIQVSHNALGSTGVELLLKCLSANAIVSLDLSCVIPTAVGNNLAKHMASYLGQ
SDCVLKELLLSGCHLSDEDCQDLARCIPFSKHLTALDLSANPKITAVGIAEVLNTFTRSS
LPLEKFDVSGCGLKTPLSTDAMDAVAGILEKKAEGGQPALRELKMSGTELTKVDHEVLLN
MWDVAHGDESQHNIDRIRCVLFTRD
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacacgataaaaaggagttcaaaagattggaaaaagccaagtttaaggctcaa
gctaatggcaaactgaaagaagaatctgaactgtgtaatgtgcttggggaacttctagct
agaaatggtgaatatgaagacgccattagggaacacaagcaagaactccaactctcagaa
tctctccaagatgtcatcggatccgccgtggctaatcgcaagattggagaatgttacagc
gccctcgaagagtaccagacggcactacgctatcagaagcgccatctgcaattggcccag
tcagttgacaaccatgttgaggagcagagagcatttgcaactattggcaggacgtatttg
tgtcagggagaaaacagtcaaggagacaaggcttcggaagcactcaataaagctcaacaa
gctttcttaaagagtttgggtgtatgtgacaagttgcgaggctcaatcagtgagaaggag
gtcatggagatgagagccagattatttctcaatcttggcttggtgtttgataataaacaa
gacttcaagaattcagccaaatttatcaagcaggccatatttatatcagaaaagcataat
ttattagaagatttgtatcgtagtcagtttgctcaaggagatatctaccagcgttgtggt
gaacactccaaaggattacgttcactggagaatgcaatgcaaactgcaaagaaactcaag
gataaaagtaaagagagtgaaacattggcttgtatggcaaatatatatttccaactgtgt
gatttccaagcagccaagcgtgttttgaagaaagcatacaagatgggatctcaagttatg
cgggataaagatgtgatagcaaggcatctcagagcagctatcaagggttgccagttgcag
agacaattacaagagttgccagatgatgcagaaacagagaccgtttccttatttgaagcc
ctgggggatttatgttgcaaggttagcagttttaccaaagctgtggaatactacaagaaa
cagctgaagtgtgcattgagtttaaagaagccaagcaaggagttaatagtcatctatgtg
tcgttggcagctacatacgcagacaacaaacaatatgagaaagctatacagatgtaccgc
aaagaactggaactaagggctggcaatttcaaagaggaaggtaaaacctggttaaacata
gctgatgcacaggagaaagccaattatgattcagaagcaatacagaagtcatacagtgaa
gctttgaactgtgctaaacaagccaagcatcctcaactacagttgagaacactgaaatcc
ctaagtcttgtgcaccaaaaatatggtcaagagcatatgtacagtgccatgaagaggaag
atacgtagccttagggaggaccatgatcttgcatccgatgatgatgatgtgagtggtgaa
gaggatgagggtggtgagcctaacacagagcagagtgattctatggatgtagacgatgac
atcattctctcagaatcagatgactctgcagcagaggaagagtatgatgtaccaacagca
tctgaaagagtcaaaagaaacaagtttgccaagcggaatgagaagggtgagactctctta
cacagggcttgtatagatggtaatctgaaacaggtcaagagacttatagagcagggtcat
cctcgcaaccccagggacaactgcggttggatccccttacacgaagcctgtaactttggc
ttctacgagattgcagagtttctactggatcatggcgccgatataaatgaccgtggcgga
gaagggtgtggtgggattaccccattgcatgatgctatagatggaggcaactttgaggtt
gctgatttgctgattaataaaggagctaatgtgttggctaagaatgatgagggtaaatct
gcaatagacaatctaatgagatggaaagatacatacgagagagatattgatgaggaaact
atggtacgatgtcgacatacacaagggttactgaataaagcaatcacagaaggtgcaaac
aggaagatcaagccaagcagaccaagaaatatcatggaagatcctgaactatttgacaaa
gaagaaggatacagtcaagtccagagaagtcaagggttatcacaaaggagtactgatatg
ggaagaactacttttacttctaaaaacagaagtatatcagatttagtcactaagaaattt
tcaagtaacaaccaaagaactaaacagtctcttcaaccagctcagagaaggtccagtttc
attgatttagatactgacgagccttcagatagtggaagagatgcaactgaatctttttct
agtcaggaatcaacttctggtagtgcgctttcgcaagattccatgcctgatatggtgtgt
cacaagaggtcaagggttcaaaggttagaggttgaggtgtcaactccagaggatgagagt
caagagagcgatgaaatacatcttgggaattcaagaggtggagttgggagtaatggtctt
aatgagtcatcaaatattgaagactttgaagaagaggcggagcaccaaaataatgaaagg
agtttggatattgatgatccaataaacgctagacattcgtacagatctgcgataagtaga
ataggcagtgctgcatcacgcctctcccaacaaacttttgagttgcctctgacaaggtca
tcatcaaccaatgacggcccagctatgatctcagaggaagaatacaccgcgggtgatgat
tggttaattgacgatgtcggtatgcagccgaccaagagaaaacgtgtggacatagatggc
acttttagcacatccacgtctaggagtcaagtatcgaaacattttgaaacgcgtacaaat
tcctccagttcttcaaggtctagattgagcaggaagaggaaaccaagacagacaaaatta
acaagtttagtcgcgcaaattggcagaataccgtcgataatccaggagaaagatgaagag
gacattagcaacacctcttccgatgttgaaatgataccagagagtcctgttgaaagtcga
gtccctgatttcccgcaaaggaacaatgtgagtctgtcgcagcaaacgcaagaacaacgc
ccacctgcagttgtaggaggaacggtaatgcgaattaaggtgaagatacaggacaagatg
tttctgataccaataccgacacgtgatgagcgtagcatgaattggttggcagaggaggca
ggcagacgttattacaactcatgcgggttgaaaccaaaactagtgctatgtacacaagaa
ggagcagagttctcacccgatgatatggtcactgatttacttactaataatgaagaggta
ttagggaaggtagaccagtgggatcttccgccactcttggagaggtataaaagagcttgt
gagaacgccaaaacaaaggagcatccactaataagaggcagcatccagctttctcaaaac
acaagtacactgacccttgccaaccatgccctctcctcgaaccattgcaccccacttttt
ctggcactccaatgccagtactccctcaagaagctcctcttacccggcaaccgcatcggt
gattccgccatctcttccctcattggagcattggggacgctacctaatttgagtcatttg
gatctttcggggaatgagattagccaggaggggttgaaggtgttccatgaggtgctctgt
ggagggcgggctttggaaggacaaggggttgtggcaagagcaggaggaggggataaccag
aagatattacagatgttggaagagctgaaccttggatacaatcctttatccgatgcctgt
gccttgtacgtgtcaagtctagtgaaacactgccctctactggccaaacttggtttacaa
tcctgcgatctttccatgaagttcttccagttgcatcgtagagcactcacagaggcattt
caaggtgccacaaatctgcacacaatacaagtatcccataatgctttgggttcaactggg
gtagaactactgttgaaatgtttgtctgctaatgccattgtaagcttggatttatcctgc
gttatacccaccgctgtgggcaataacttagctaaacatatggctagctacctgggtcag
agtgattgtgttttgaaagagttgctgctgtcaggttgtcatttatctgatgaagattgt
caagatcttgcaaggtgtataccattcagcaaacacctaactgctctcgatctctccgca
aaccccaaaatcactgcagttggcatagcagaagttctcaatactttcactcgctcatct
ctaccgctagagaaatttgacgtctcgggttgcggcctgaaaacgcctctctcaacagat
gcgatggatgctgtcgcaggaatcttggagaagaaagcggaaggaggccaaccggcattg
agggagttaaaaatgtcaggtacagagttgaccaaagtggatcatgaggttctgttgaat
atgtgggacgtagcacatggggatgagtctcagcataatattgataggatacgatgtgta
ctgttcactagagactga
DBGET
integrated database retrieval system