Amphiura filiformis: 140135908
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Entry
140135908 CDS
T10871
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
afil Amphiura filiformis
Pathway
afil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140135908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140135908
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
140135908
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
140135908
NCBI-ProteinID:
XP_072013677
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Position
16:complement(34317461..34337717)
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AA seq
223 aa
AA seq
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MASGSRAGWPKASANFNNKYAAPPAAVPRERTAILYPLTNYTFGTKEPLYEKDPSVSARF
QRMRDEFDKLGTRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELQVGEDEVDGLKRL
MTEILGRQDGVQQDWMVEDVIANWYRPNFEPPQYPYIPAHITKPKEHKRLYFVQLQEKAL
FAVPRNYKLVAAPLFELYDNSPGYGPIISSLPQLLSRIQLTYC
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggatccagagcgggttggccaaaagcaagtgcaaattttaacaataagtat
gcagcccctccagctgcagtcccaagagaacgtacagctattctgtaccccctgacaaac
tacacatttggcaccaaggagccattgtatgagaaagatccatcagtgtcagcaagattc
caacgtatgcgtgatgagtttgataaacttggcacaagacgatcagtcgagggtgtttta
attgtacatgagcatggcttgccacatgtgctgcttctgcagttaggaacaacatttttc
aaattacctggtggtgaacttcaagtcggagaggatgaggtagacggactcaagaggctc
atgacagagatcctgggtcgtcaagatggagtacaacaagattggatggtagaagatgtt
attgccaattggtacagaccaaacttcgagccacctcaatatccatacatacctgcacac
attacaaagccaaaggagcacaagagactctattttgtacaacttcaagaaaaagctttg
tttgcagtacctagaaactacaagttagtagcagctcctctatttgagttgtacgacaac
tcgccaggttatggtcctattatctccagtttaccacagttacttagcagaattcagcta
acttattgctaa
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