Amphiura filiformis: 140135945
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Entry
140135945 CDS
T10871
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140135945
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
140135945
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
140135945
Multi subunit type E3
LUBAC complex
140135945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
IBR
Zn_ribbon_RanBP
zf-RING_5
zf-RING_UBOX
zf-C3HC4
ubiquitin
zf-RING_11
IBR_1
zf-C3HC4_2
DUF416
Motif
Other DBs
NCBI-GeneID:
140135945
NCBI-ProteinID:
XP_072013740
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Position
16:37101358..37138653
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AA seq
573 aa
AA seq
DB search
MGGATSGETVGALIESLKKALAAGDVASAKEVAGNLAQLKVKTNMIVESVGDIPPGRPGT
IRLNVNVEDRVETGVKIILTVRPNDTIAALKRKMFHEYTFPVQAQRWIMGRRIPKDFETL
LENGIGISGANCYLYLVSAEKVGVTKRQAELERQSLNHPATPQNPPGLDRAIPAPVYPPY
VEPQQTYLQPRPEAYQPQSAGYTTLPPPRTRIPSGGDNGGYMRMDPRPRRPTPAPTPPKR
PAKPTADEVGWHCPACTLINPPTFPGCSMCSTERPADYQVPPEGSYIMDADEKRRYEDVR
RNEQLMQQLEQDWEREANEEAAANFQRILDTEGQELITNTEDFECLICYTDVAPGEGVVL
RDCLHTFCKECLGEHIKASEEPVVMCPYQDGLYSCPEAITEREIKALVTPAEFKKHLDRG
LTTAESQAANSFHCKTPDCPSFCFFDDNNNFFPCPVCGKQNCLTCKAIHEGMNCKQYQDD
LKRRATNDDAARKTQEALDTMVRDGEAMKCPKCGIIVQKKDGCDWIRCTMCKVEICWVTR
GLRWGPGGTGDTSGGCRCRVAGKPCHPNCGNCH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggggggtgccacaagtggagaaactgttggggcccttattgaatcattgaagaaggcc
ttggcagcaggtgatgtagccagtgcaaaggaagtagctggcaatttagcacaactcaaa
gtcaaaactaacatgattgtagaaagtgtgggagatattccaccaggaaggcctgggact
atcagacttaatgtaaatgtagaagacagggtggaaacaggtgtgaagatcatcttaaca
gtaagaccaaatgacactattgctgcactgaagagaaaaatgtttcatgaatatacattt
cctgttcaagcgcagagatggattatgggtagaagaatacccaaagactttgagacttta
ttagaaaacggcattggaattagtggtgctaattgttatctgtatttggtatcggctgag
aaagttggtgtcacaaagagacaagcagaacttgagagacaatcattaaaccatccagcg
acacctcaaaatcctccaggcttagaccgcgctataccagcacctgtctaccctccctac
gtggagccacaacaaacatatcttcaacctcgaccagaagcatatcaaccacagtcagct
ggttatactacgttaccaccgcctagaaccagaataccgtcaggaggtgataatggtggt
tatatgagaatggatccaaggcctagaagacctactcctgcacctacaccacctaaaaga
ccagctaagccaactgcagatgaggttggttggcactgcccagcatgtacacttatcaat
ccccctacattccctggatgttccatgtgtagtacagaaagacctgctgactaccaggta
ccaccagaaggttcttatattatggatgcagatgagaaaagaagatatgaagatgtgagg
agaaatgagcaacttatgcaacagttggagcaggattgggagagggaagcgaacgaggaa
gcagcagcaaactttcaacggatcttagacacagagggccaggaactgattacaaacaca
gaagactttgagtgtctgatatgttatacagatgtggcaccaggtgaaggggtggtcctc
agggactgtttacatacattttgcaaagaatgtttaggagagcacatcaaagcaagtgag
gagcctgttgtgatgtgtccttatcaagatgggttatactcatgcccagaagctataaca
gaacgagaaatcaaagctcttgtaacaccagcagaatttaaaaagcaccttgatcgtgga
ctaacgacagctgaatcacaagcagctaacagcttccattgtaagacaccagattgcccc
agtttttgcttctttgacgataacaacaacttcttcccgtgtcctgtgtgtggtaaacag
aactgtttgacatgtaaagcaatacacgagggaatgaattgtaaacaatatcaagatgat
ctaaagagaagagcgactaatgatgatgcggctaggaagacgcaggaggcactagatacc
atggtgcgagacggtgaagcaatgaagtgtcctaaatgtggtattatagtacagaagaaa
gatggatgtgattggatcagatgtactatgtgtaaagttgaaatatgctgggtgacaaga
ggcctcagatgggggccagggggaacaggcgatacctctggtggatgtcgttgccgtgtt
gctggtaaaccttgtcatccaaattgtggtaactgtcattaa
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