Amphiura filiformis: 140136134
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Entry
140136134 CDS
T10871
Name
(RefSeq) uncharacterized protein
KO
K23195
transcriptional repressor CTCF
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afil03000
]
140136134
03036 Chromosome and associated proteins [BR:
afil03036
]
140136134
Transcription factors [BR:
afil03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140136134
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140136134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-C2H2_ZN142
zf-C2H2_REST
zf-C2H2_15
Zf-C2H2_ZNF451
Invasin_D3
zf-C2H2_ZNF462_1st
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-Di19
Motif
Other DBs
NCBI-GeneID:
140136134
NCBI-ProteinID:
XP_072013941
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Position
16:complement(49730912..49732657)
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AA seq
576 aa
AA seq
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MEQGGDDVRTQYVIVNNEGQGSNDPNVYDFYAGDDDKTPVTIGSQDDKDIKPKTKRFTVP
KFDDGRLINQVLGRNKKSTSSGSPREPKVHECNLCGRIFRTSTLLRNHHNTHTGTKPYKC
EPCAKAFGTSGELSRHNKYIHTHEKPHKCPLCDYASVESSKIKRHMRSHTGEKPYKCTLC
EYASTDNHKLKRHMRVHTGEKPYQCGECEQTFSQKSTLKEHMWKHTGNRPAHKCNHCETS
FGRLADMKTHIRKMHTSSEPLICRVCENGFTDRFTYMQHIKTHRGEKIFKCGECGYSAPQ
KRHLVVHMRVHTGERPFECDQCHETFKHKQTLVNHAKAKHNMIIDASEDLTPRKRKLSEE
SDGSPGKKVSRRQRMLGENEGLVVDEHGNPITDPNTLQAVQQSDGTLQIVQSSGDGAVPV
TILTVTSGPDGSVQNVEQTLQMVNGQLTAVHHGPGEGPSEDVQPSQIIMQVGQQGTTPST
SGHQDEAVAAQAAAEILAQAAQMTTQQEELPQQDELVPKIKVEKAAKFTRQAAAAAAVPQ
PPEEEEEEQKEQEEEGEEEDGGDGTIYLFVEEAEDQ
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagggggagatgatgttcgtactcagtatgtaattgtaaataatgagggtcaa
gggtcaaatgatccgaatgtttacgatttctatgccggagacgatgacaagacacctgtc
acgattggaagtcaggatgacaaggacatcaaaccgaaaacgaaacgttttactgtcccc
aaatttgatgacgggcgtttgatcaatcaagtcctcggcagaaacaagaaaagcacaagc
agcggcagtcctcgcgaacccaaagtgcacgagtgtaacttgtgcggccgtattttccgt
acttccacgcttctccgaaaccatcacaacacccacacaggaaccaaaccctataaatgt
gaaccgtgtgctaaagcatttggaacgtctggtgaattaagtcgtcataacaaatacatc
catactcacgagaagccgcataaatgtccactttgtgactatgcaagtgtagaatcgtcc
aagattaaacgtcacatgagatctcatacaggagagaagccatataaatgtacgctttgt
gagtacgcgagtaccgataaccacaaattaaaacgacatatgagagtccacacaggcgaa
aaaccataccaatgcggggaatgtgagcagactttttcgcaaaaaagcaccctcaaggaa
cacatgtggaaacacacaggcaataggccggcgcataaatgtaaccactgcgagacatcg
tttggacgccttgcagatatgaagacgcacattcgtaagatgcacacatcgagcgagcca
ttgatttgcagggtgtgtgagaatgggttcaccgatcgattcacttacatgcagcacatt
aagacgcaccgaggtgagaagatctttaagtgtggtgagtgcggatattcagcacctcag
aagcgccatcttgtggttcacatgcgtgtccatacgggagaacgtccatttgaatgtgac
caatgccacgagaccttcaaacataagcagaccttggttaatcatgccaaagctaaacat
aatatgatcattgatgcctcagaagatcttaccccgcgaaagaggaagttatccgaagaa
tctgatggttcacctggaaagaaagtatcgaggcgacaacgtatgcttggagaaaatgaa
gggctggtagttgacgaacatggaaatccaatcacagatcccaatactttgcaagcagtt
caacaaagtgatggcacattacaaattgtacaaagcagtggggatggagcagttccagta
accatcctgactgtcacttcaggaccagatggatcagtacaaaatgtggaacaaacatta
cagatggtcaatggtcagttgacagctgtccaccatggtcctggagaaggtccatctgaa
gatgtccagccaagccaaatcattatgcaagttggacaacagggaacaacaccttccaca
tctggccatcaagacgaagccgtcgcagcccaagcggcagctgagattcttgcccaagca
gcacagatgaccacacaacaagaggaactgccacagcaggacgagttagtaccaaagatc
aaggtagagaaagcagcaaagttcacaaggcaagcagctgctgctgcagcagtaccacaa
ccacctgaagaggaagaggaggaacaaaaggaacaagaagaggagggggaggaggaagat
ggaggagatggtacaatatatttgtttgttgaagaagctgaagaccagtga
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