Amphiura filiformis: 140136152
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Entry
140136152 CDS
T10871
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
afil Amphiura filiformis
Pathway
afil04137
Mitophagy - animal
afil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140136152
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
140136152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140136152
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
140136152
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140136152
Multi subunit type E3
ERAD complex
140136152
LMBR1L-GP78-UBAC2 complex
140136152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
G2BR
zf-RING_UBOX
zf-RING_11
CUE
zf-C3HC4_3
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
RING_XB3-XBAT31
zf-RING_Vps41
Poty_PP
zf_RING_Vps8
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
140136152
NCBI-ProteinID:
XP_072013958
LinkDB
All DBs
Position
16:complement(50430162..50479346)
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AA seq
791 aa
AA seq
DB search
MPVLVLQPPTLPPLSVYFTLSFLSLSWCILQARHMLATVEQAMAAGDQPPLSELHLTPDA
DLNEGQVPPQYQEETVNETLYMLGIQPDDSHAFKLFKVMMVDIWSVLAIINMSYCLLIMV
GKLLQHIIFGQLRASERQHLRDKLWNYSFYKFIVIFGVLNVQTLEEMVLWVAWYSALGFL
FTFTQLCKDRFEYLSFSPTAAMFGHAKVLALLMSVIACCLGFTTMSILVGVYLDVSLCLF
MLAECVLLGIRAVYVLARYGIHMYDMRYEGVWESRGTIIYYLEFVMELSALTVDLAHHIH
MLLWGNVFLSMASLVICMQLRYLYNEIQRRVQRHRNYRQVVSNMEKRFSAATDEELATNN
DDCAICWEEMKTARKLPCGHLFHNACLRSWLEHETSCPTCRLALNISPNPQPAANEPQPD
APEAGAAGDAPANLQRNRRNFFHFDGSRIASWLPSFSVEVTQHHMMNQAAAAAMRTSQLD
IMGHQVNQMFPNIPFDMIVEDLQTTRSVEMTVDNILEGRLVAPPAGHGAAGNAAVNAEMN
NQNNFNFHQRIPNPTAPPAWPPRNNQWPPAAPQQPSAGSPWPTDYAASDMGTERDRQINL
PGSQRFNQFGYPHQQQPTSNDAGIGGDGPSSAGASSVTDERQVPSSAPDASSSAATASSS
SSAAAAASSSAGGIGLGDGPQVMSGRFSKSAPERQEMLQQRKEMLLQQARRRFQGRQTVT
GAPVTTPSSQSDESIAGARANQERPSLNIPSSLSSMQRMTTSRTGTEEEARMRRRTAAYQ
AALRRMSQQQQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgttagtgttacaaccgcctaccctgccaccactgtcagtctattttacactc
agcttcttatccctatcatggtgcatattacaagcaagacacatgctggcaacggtggag
caggccatggctgctggcgaccagccccctctgagtgaacttcacttgactccagatgca
gacttgaatgagggccaagtgcctccacagtaccaagaggagactgtgaatgagactttg
tatatgctgggtattcagccggatgatagtcatgcttttaaactcttcaaagtgatgatg
gtggacatttggtctgtgctggctatcatcaacatgtcctactgtcttctcatcatggtt
ggtaaactactgcaacacatcatctttggtcagctaagagccagtgaaagacagcattta
cgagacaagctatggaattattccttctataaattcattgtgatatttggggtgctgaat
gttcagacgttggaggaaatggtgctgtgggtcgcttggtattctgcactgggctttctc
ttcacttttactcaactctgcaaagacagatttgaatatctttcattttctcctacggca
gccatgtttggccatgccaaggtgctggcactcctcatgtccgtcatcgcgtgctgtctt
ggattcacaaccatgtctatattggtgggagtttatcttgacgtcagtctctgtctcttc
atgttagctgagtgtgtccttcttggtatacgagcagtgtatgtacttgcaaggtatggt
atccacatgtatgacatgcgatatgaaggagtatgggagagtcgtggcactattatatac
tatttggaatttgtgatggagttatcagcactcacagtggacttggcacaccacatacat
atgctgttatggggcaatgtgttcctgagcatggctagtctcgtcatctgcatgcagctg
cgctacttatacaacgagatacagagacgcgtacagcgccatcgtaattatcgacaggta
gtcagcaacatggagaaacgattctcggcagctacggacgaggagctcgcaaccaataat
gatgattgcgccatctgctgggaagaaatgaagacggctcggaaactgccgtgtggtcac
ctgttccataatgcatgtctgaggtcatggttggagcatgagacgtcatgtcccacctgt
cgtctggctctcaacatcagccctaacccacaaccagcggctaacgagcctcaacctgat
gcacctgaggcaggcgctgcaggggatgcgccggctaatctacagcgaaatagaagaaac
ttcttccattttgatggttctcgcattgccagttggttgcccagtttctctgtggaagtt
acacaacatcacatgatgaatcaggccgctgctgcagcaatgagaacatctcagcttgat
atcatgggtcatcaagtcaaccagatgtttcccaacatcccatttgatatgattgtggaa
gatctgcaaacgacacggtctgtcgagatgacggttgataacatcctagaagggagactt
gtggcacctccggctggacatggtgcagcaggtaacgcagcagtcaatgcagaaatgaat
aaccaaaacaacttcaactttcaccagcgaatcccaaacccaacagctcctccagcttgg
ccccctcgtaataaccagtggccccctgcagcacctcagcaaccctctgcaggctctcct
tggcctacagattatgcagctagtgatatgggaaccgagagggacagacagattaacctt
cctgggtcgcagagatttaaccagtttgggtatcctcatcaacaacagcctacaagtaat
gatgcagggattggtggcgatggaccatcaagtgctggcgcaagttcagtaacggatgag
agacaagttccatcttcagcaccagatgcatcatcatcagcagcaacagcatcatcatca
tcatcagcagcagcagcagcatcatcatcagcaggtggaataggattaggtgatggacca
caggtcatgtcaggaaggttttcaaagtcagcaccagagagacaagagatgttacaacag
agaaaagagatgttacttcagcaagcaagaaggagatttcaaggcagacagactgtcaca
ggggcacctgtaacaactcccagcagccaatcagatgagagcatagccggagcaagagcc
aatcaggagaggccatctttgaacatcccaagctcattatcatcaatgcagaggatgaca
acgagccgtacagggacggaggaggaagcaaggatgaggcggaggacagctgcctatcag
gctgccttgagaagaatgtcccagcaacaacagtag
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integrated database retrieval system
