Amphiura filiformis: 140136235
Help
Entry
140136235 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: neural-cadherin-like
KO
K27892
neural-cadherin
Organism
afil Amphiura filiformis
Brite
Cell adhesion molecules [BR:
afil04515
]
Cadherins
Cadherin related
140136235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140136235
NCBI-ProteinID:
XP_072014059
LinkDB
All DBs
Position
16:55811835..55860677
Genome browser
AA seq
1942 aa
AA seq
DB search
MNQEGEIFTKIEVTPLLGQVETFEVEARDEGGRNRRAEVQVTVSSSSDDPPQWTENWENP
LIIPEDTPVGDVILTVAATSLYTPLTYSIVLGQKPETNNPKKFDLESSVTQLEGFIKVFD
DLDFETTKSSAFTNQRFELKLQARDTKSISSFTTLVVQLQDVNDNIPQFTLSVYETAVPE
EREIGTSVVQVEAIDKDVTPEFRQVEYEILQTNFKDREDWSKFSIDHNTGLIRTADKFDR
EDIDYYQILVAARETNRPSNNPDTAVVRINIVDENDNEPEFSKNLFTVQVPEDRDVGSSI
MMVTATDADQGGTLRYLITEGNTGGTFEVQPETGEIRLGAPLDFEKKTSYVLKYSANDGL
FVADTEIRVNVENINDERPEFEELVYQITVLEEDDTFPRSILTVKANDGDIGAAPTAIVY
SLIGSGTDDIFSISGTDDNAGEIFLNAKLDREEKSEWSFLVKAKDDNGIGLEGFAQVIVT
VGDVNDHDPVFGELEYVGSVEENSPVGTSVMTLTATDADDPNTPNGELSYFVIDAYDPIT
NPNDGSDFFSIDAKTGVVKVKGALDREQKDEYDLTVAASDGLNEATTTAKITILDKNDNS
PTFIDGDYKATIPETLKVGATVLTLSAMDADSTSSENVQFTIVSGNVGDQFKIMTDGVTL
TGIVQVARPLDFEVAPNSFVLNIEVTDGVNQADMASAAVIISDVNDVIPEFEETLYERTV
AEDIAVETSIITVIATDDEMGANGDFVYKIDENTDPEGQFAIGETSGRVTVAKGLDRETV
EEHVLTLLAVDKGTPPQTGTATLIITLLDVADSPPHFSEPYVAEVEESVAAPQFVVTVTA
VDDDLTPGGPPFSFDLVNEEVGEQFSWEADETAGTVSIETKVKFDREEQEFYEMKFEIRE
GLSSGIGTGTVTITILDINDHPHKPATKEMLVYSYEGTIPESPIGFVDAPDQDVIEDKTY
VPIDSPDLDYFKVDSDTGEVTILANTPGGVYSFKVTVSDDGRFPDVESTVTVTVKEIPKE
AVFSSGSIRFLDITAEEFITASETKPSKLDQLHDLLVEIIGAKKENIDIFGIMNVPGKER
TIDVRYSAHGSPYYPAEQLDGAVLANLDKLLPTRLVFNKVEHKFDLAEGLGVTVGQVPID
ECIHEWVCESSCTNEFVVDPTPTVVNTPSQSFTAITTYLVPVCECGALSKPVGPCDGVTT
CVNGGTCTDTESGHSCECQEGFEGPECQQTKRSFKGDGSFAWFETIRQCEDTHLSLEIIT
TKADGTLLYNGPITKSVSEEDPEDFILLELDGGRPVLTINLGSGSVTLQIPKAAPLNDGE
WHKLDVFRTGQFVEMIIDLCQSASVAEDHSSSATDTSTCKTNATTPVPNISRKNTDKKPI
IQVHLNLNTPLQLGGVDISEGFTYPEEIEFKGGFDGCMQNLNSDGYLFDLQTPGKQKNSE
PGCPRTDENCMTNDIPPEPKCKNGTCIADLDDAYCVCYPGFMGERCDQETPAHDFADDSY
VMYQLNEGNLELDEREANYQIMMRTREREGLIWTISNQNGLEFTTLELVDGTVRGRWNLG
DGEITAHLDQFQVDNGEWHAIQFTRYDNYVTIKIDGGGGVRQIENRESTHQTLRVDPNSL
MVGAFVQRAVEITQNFEGCINDPRINNRYLGIMSATDYATPLPSNGVSEGCPSDSCADDP
CPVPFVCVDLWREYECRCPKGQEQVGNDCIPLDECESNPCQNGGTCYDEDNAFRCDCLPG
WKGIYCEVEAVAVVQPPLTFSIGAIIAILVCLLLILILLIAFVMYKRNNDRKQALAFAID
PEDDIRENFINYNEEGGGEEDHDAYDVGTLRKPVDTVSEGSVEPTKIIPTEQAPTKAAPR
PLGDEPNVGDFINDRLNNADDDPNAPPYDTLLTFDYEGEGSTAGSLSSLNSSSTEDEQNY
DYLNNWGPPFKKLADMYGGGED
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggagggcgagatttttaccaaaattgaagtgacaccgctcctgggccaagta
gaaacatttgaagtagaggctagagatgaaggtggccgaaaccgcagagccgaagtacag
gttaccgtcagtagctcgtcagatgacccaccacaatggactgagaactgggagaaccca
ttaatcatcccggaagatacacctgttggagatgtgatactcaccgtggcagcgacatcc
ctttacacaccattgacctacagtattgtgttaggacaaaaaccagagactaataatccc
aagaagtttgatttagagagttcggtgactcaactggagggctttattaaagtgtttgat
gatcttgattttgaaacgacgaaaagttctgcatttacaaaccaacgctttgagttgaag
ctacaagcaagagacaccaagtcaatctcaagttttaccaccttagtggtccaactccag
gacgtcaatgacaacattcctcagtttacgctctccgtatacgagacagcggtaccagaa
gaacgagaaataggaacatctgtggtacaggtggaagctattgataaagatgtgacacca
gaattcagacaggtcgaatacgaaatattgcagactaacttcaaggacagagaagattgg
agtaaattttccatcgaccataatactggtctgattagaactgctgataaatttgatcgg
gaggacattgattactaccaaatccttgtagctgctcgtgagactaatagaccttccaat
aacccagatacggctgtggttcgaatcaacattgtggacgagaatgacaatgagccagaa
tttagcaagaatctgtttactgtccaagtgccagaagatagagatgtgggttccagtatc
atgatggtcactgctacagatgctgaccaaggtggcacacttcgctatttgattacggag
ggcaacactggcggaacatttgaggtgcaaccagaaacaggcgagatccgtctaggtgcc
ccgctggattttgaaaagaaaacttcctacgttctaaagtacagcgccaacgacggtctt
tttgtcgcagacacagagatcagggtgaacgttgaaaatattaacgacgaaagacccgag
tttgaggagcttgtttaccagattacagtcctggaagaagatgatacatttccaaggagt
attttgacggtgaaagcaaatgatggggatataggtgcagcaccaaccgccattgtgtac
tccctcatcggatcaggaaccgatgacatcttctccatctcgggaaccgacgacaatgca
ggagagattttcctcaatgctaagcttgacagagaagaaaaatcagagtggtctttcctg
gtgaaggctaaggacgataatggtataggtcttgaaggatttgcacaagtcattgtcaca
gttggggatgttaacgatcacgatccggtctttggagagttggagtatgttggttcagtg
gaagagaattcgccagttggtaccagtgtcatgacattgacagctaccgatgcagacgat
cccaatacacccaacggcgaactgagctactttgttatagacgcatacgacccaatcaca
aaccccaatgatggtagcgactttttcagcattgacgctaaaactggtgtagtgaaagtg
aaaggcgccctcgatagagaacaaaaggatgaatatgatctgaccgtggctgcctcggat
ggactcaatgaagctacgacaacagcaaaaatcacgatcctggataagaacgacaactca
cccaccttcattgatggagactataaagccaccataccagagaccttgaaagttggggca
actgttctgaccttgtctgcaatggatgcagacagtacgtcttcagagaatgtccagttt
actatcgttagcgggaatgtcggtgatcagtttaagatcatgacagatggagtcacgtta
acaggaattgtccaagttgccaggccacttgactttgaggttgcacccaatagttttgtc
ctgaatattgaagtcacggatggggtcaatcaagctgacatggcaagcgctgcagtgatc
atcagtgacgtcaatgatgtcatccctgaattcgaagaaactctatatgaaagaacggta
gcagaagacattgctgtggaaacaagtattattactgtgattgcaacagatgatgaaatg
ggagcaaatggagactttgtttataaaattgatgagaacacagatccggagggtcagttt
gctatcggggaaaccagtggcagagtgaccgttgctaaaggtttggacagagagactgtg
gaggaacatgtactaacattgttggctgtcgacaaaggaacgccaccacagactggtact
gccaccctcatcatcactttgcttgatgtcgcagactccccaccccatttcagtgagccc
tatgttgctgaagtggaagagagtgtggcagctcctcaatttgttgtcacagtgactgcg
gtggatgatgatctcacaccagggggtcctccatttagttttgaccttgtcaacgaagaa
gtgggagaacaattctcttgggaagctgatgaaactgcagggaccgtttccatagaaacc
aaagtcaaatttgaccgggaagagcaagagttttacgagatgaagtttgagattcgtgaa
ggactgagctctggcatcgggactggtacggtgacgattacgattttggacatcaatgat
catcctcataaacctgccactaaagaaatgctggtgtatagttatgaaggtactattcca
gagtctccaattggttttgtggatgcacctgatcaagatgttattgaagacaagacttat
gtacccattgacagtccagatctggattatttcaaggttgatagtgacacaggagaagta
accatcttagccaacactcccggtggtgtatattcctttaaagtcaccgtcagcgacgac
ggcagattcccggacgtagaatccaccgtcacggtcaccgtcaaagaaatccccaaggaa
gcagtgttcagctccggatcgatccgattcctagacatcacggccgaagagttcatcact
gccagtgagacaaagccgagcaagctggaccagctacatgatctcttggtggaaatcatt
ggtgctaaaaaggagaatattgatatctttggcatcatgaatgtacccggtaaagaacgg
acgatagatgtgaggtactctgctcatgggtcgccgtactatccggctgaacagttggac
ggagctgtgctggctaatcttgataagctcttacctactagacttgtatttaacaaagtg
gaacacaaatttgatctggccgaaggattaggagtgaccgtgggtcaagttccaattgac
gaatgcatccacgaatgggtgtgcgaatcatcgtgcaccaacgaatttgttgttgaccca
acaccgacagtggtgaacacaccgtctcagtctttcactgcgattacgacatatctggta
ccagtgtgtgagtgcggtgcgttgtctaaaccagttggcccttgtgatggtgttacgact
tgtgtgaacggcggaacatgtacggatacagaatcaggacacagctgtgaatgtcaagag
ggtttcgaaggtccggaatgtcaacagaccaagcgaagctttaagggggatggtagcttc
gcctggtttgagacgatacgacaatgcgaagatacccacctgtcactagaaatcatcaca
accaaagctgacggaacgctattgtacaacgggccgatcacgaagagtgtatctgaagaa
gaccctgaagatttcatattattggagcttgatggtggcagacctgtgctgacaattaat
ttaggttctggaagtgtgacgcttcaaataccaaaggcagcgccgctgaatgacggtgaa
tggcacaaattggatgtattcaggactggacagtttgtagagatgattattgacttgtgc
cagtctgcaagtgttgctgaagatcatagcagtagtgcaacagatacaagcacatgtaag
accaatgctaccacaccagtacctaacatatcaagaaaaaatacagataagaaacctata
atacaagtgcatttgaatttgaacacgcctcttcaactcggcggtgttgacatctcagag
ggttttacatatccagaagaaatagaattcaaaggtggatttgatggctgcatgcaaaac
ctcaactctgacgggtatctgtttgacctgcaaactcctggcaagcagaagaacagtgaa
ccagggtgcccacgtacggacgagaactgtatgacgaatgatataccacctgaaccaaag
tgtaagaatggaacttgtattgccgacttggacgatgcgtactgcgtgtgttatcctggg
tttatgggtgaaagatgtgaccaagagactcctgcacatgactttgctgatgacagttat
gtaatgtatcagctgaatgagggtaatttggagctggatgagagagaggctaattatcaa
atcatgatgagaacaagagagagggaaggccttatttggaccatcagcaatcagaatgga
ttggaatttacaacattggagcttgtcgatggtactgtaagaggacggtggaatctaggt
gatggggagatcactgcacacctagatcaattccaagtagacaatggggaatggcatgcc
attcagttcactcgctacgacaactatgtcacaatcaagattgacggcggcggtggcgta
aggcagattgagaaccgtgaaagcacacatcagactctgcgagtggaccccaatagtttg
atggtgggtgcgtttgtacagagagctgtggaaattacacagaattttgaaggctgtata
aatgacccacggataaataaccgctacctcggcattatgtcagcaacagactatgcaaca
ccacttccctccaatggggtatcggagggctgcccctccgactcttgtgctgatgatcca
tgccctgtcccatttgtgtgtgtcgacctgtggagagagtatgagtgcaggtgtcccaaa
ggtcaggaacaggtcggaaacgactgcatccccctggatgagtgcgagtccaacccatgc
cagaacggaggaacttgttacgatgaagataatgcattcagatgtgactgtctgccggga
tggaagggaatatactgcgaagtcgaagccgtagccgttgtacaaccgccactcacattt
agcattggcgccattattgctatactcgtgtgtctcttgttgatacttatactactaatc
gcttttgtcatgtacaagcgcaacaatgaccgcaaacaagctctagccttcgccatcgac
cctgaagatgatatcagagagaatttcatcaattacaacgaggaaggtggcggagaggag
gatcacgatgcatacgacgtaggcaccttgaggaaaccagtagatacagtgagcgagggc
agtgtagaacctaccaagatcatacctacagaacaagcacctacaaaagcagcaccaaga
ccgcttggtgacgaacccaacgtcggcgatttcatcaatgacagactaaataatgcagac
gatgatccaaacgcaccaccatacgacacactattaacattcgactacgaaggcgaaggc
tcaacagcgggctcgctaagttcactaaatagcagcagtactgaagatgaacagaactat
gattacttaaataattggggaccaccctttaaaaagcttgctgatatgtatggtggcgga
gaggattag
DBGET
integrated database retrieval system
