KEGG   Amphiura filiformis: 140136270
Entry
140136270         CDS       T10871                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
afil  Amphiura filiformis
Pathway
afil03013  Nucleocytoplasmic transport
afil04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140136270
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    140136270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afil03019]
    140136270
   04131 Membrane trafficking [BR:afil04131]
    140136270
Messenger RNA biogenesis [BR:afil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     140136270
Membrane trafficking [BR:afil04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    140136270
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Ge1_WD40 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 140136270
NCBI-ProteinID: XP_072014094
LinkDB
Position
16:58865746..58887844
AA seq 419 aa
MFVAKSIAAEHKDLIHDIAFDFYGRRMATCSSDQSVQVWDLKEDGEWHCSASWKTHFGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEMIGDSHPNERKQSHWTKRAMLVDSRTSVTDVK
FSPRHLGLQLTTCSADGVVRFYEAPDVTNLAQFTVNEEIHTKMSCSCVSWNPSRVHPPMI
AVGSDDPNPAGGGKVQIFEFRDSERKWIKVETLMNITDAVHDLSFAPNLGRSYHVIAVAT
KDVRIMTLKPLRRDPGVMGPMRLEIRQPAQLEHNDAQVWRISWNVTGTILASSSDDGYVR
LWKANYLENWKCIQELKGDGTSVPPTLALHRESQQSQSQGKSQSSQDSSMMDSFSRSRGR
FKLTKSKTMQDLYEQPRRSHVSGSTSSPSAELSTSLPVAASPISRRNFDQTFYNAAFQF
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgtttgtagccaagagtatcgccgcggaacacaaggacctaattcacgacattgccttt
gatttctatggaaggcgaatggcaacatgttcaagtgatcaaagtgtacaagtatgggat
cttaaagaagatggggaatggcattgttcagcaagctggaagactcattttggttcagta
tggagagtaacatgggctcatccagagttcggacaagtgttagcatcttgttcatttgac
agaacagcagcagtatgggaggaaatgattggtgactcacatccaaatgaaagaaaacaa
agccattggacaaagagagccatgctggtagacagcaggacatcagtgacagatgtaaaa
ttctctccaaggcatcttggtttacaactgactacctgctcagcagatggtgttgtaagg
ttttatgaagcacccgatgtcactaatttagcacaattcacagtcaatgaggaaatccat
acaaaaatgagctgcagttgtgtatcatggaatccctcaagagtgcatccacctatgata
gcagtaggaagtgatgatccgaacccagcagggggaggaaaagtacaaatatttgaattc
agagattcagaaagaaaatggatcaaagtagaaacacttatgaacataaccgatgcagta
catgacttatcttttgcacccaatcttgggagatcttatcatgtcatagcagttgctacc
aaagatgtcaggatcatgactctcaagcccctaaggagagatcctggtgtaatggggcct
atgcgattagaaatccgacagccagcccagcttgaacacaacgatgcacaggtgtggcga
ataagctggaatgtaacagggacaatcttagcctcgtctagtgatgatggctatgtcaga
ttatggaaagccaattacctcgaaaactggaagtgcatccaagaactgaaaggcgacggc
acatcggtaccaccaacattagctctccaccgggaatcccaacaaagtcaaagccaagga
aagagtcaatccagtcaagacagcagcatgatggatagtttcagtcgcagcagaggaagg
tttaagctgacaaaatccaagactatgcaggatttatacgagcaacccagaagatcgcat
gtgtcaggatctacttccagtcccagtgctgaattgagtaccagcttgcctgttgcggca
tcacctatttctagaaggaactttgatcaaacattctacaatgctgctttccagttttga

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