Amphiura filiformis: 140136857
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Entry
140136857 CDS
T10871
Name
(RefSeq) TBC1 domain family member 2B-like
KO
K20166
TBC1 domain family member 2B
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140136857
Membrane trafficking [BR:
afil04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
140136857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_3
PH_8
Rpn13_ADRM1_Pru
Thiamine_BP
NUP50
LPD5
Motif
Other DBs
NCBI-GeneID:
140136857
NCBI-ProteinID:
XP_072014560
LinkDB
All DBs
Position
17:complement(5950169..6016668)
Genome browser
AA seq
1099 aa
AA seq
DB search
MEVPTGILISFGDEGQEKVAIKPHEEPVAPPRRSRKIRSVSSPNATDTVQVEGSKGVVVD
QDQVGPMKNTRVISPPRRPQSMPVVPLVKVSQSGDSQIGGTMIEERTGVCEVQHQKQMSA
TENPEPLKLCGYLNKLGEKGLIKSYKTRWFVYDNQRCHLYYYRSAHDLIPLGSIDISNAS
LNFNVATEAPGHFQICTEGRVYHLEAKDRQTKMFWLQELQQRRREYSAHRTTLSRERTSY
LTSSPAALHQPTTGLVSTQRIKAKHGDPWTGLPPVLDRVELPTHSIGEATANAIPQTGVF
NFSLTNLKTEIRNQMSSFRLKGVPSTSPVEVNKYSHVDEEEDANTPSKPRASSVRSTTSV
HSLGSDGGVSPTTDSTPTDPSRQKSMGLKAGFIKKLGRTPSDASSGSSVWFENQRNGCPN
CAKLQMEVSSLKEEVDVIEGEVQASKEVINMLHKQLTATQMEKATTSLYLDSKTDQQKIM
ILQRKDKQLIQLEQLLQDMRDDRDNIKLQLGDCQREVQNLKEQTAMFMEMIEAKDEVVVS
LTNRIQELEKNEAIHAVVTPGGTTSFERRPLSPQPDTDTTNETHTVPTVLGGVDPKLHEK
LKDASEAFEMQNKFLNNEILELNQLRDDDLLRENDMIEKYADLEAEHLKTQSKYLLVLDE
LRGPRRESEEAPSMGTDEIISRLIEEAITTDPLKNRESVLSTDQHATSVKESYDRYGFTR
QPSEDDDGDEVGSTLTAKAAVLKKRSEEIQTLRSNTEVSLAVKWENYLVTHGDGDKDLVG
TPELKSLVRAGIPHEYRARIWKACVEWRVKKDKETTGPGYYERLLKSENFKSNPATKQIE
LDLLRTLPNNKHYDTIESPGIPKLRRVLKAFSVHDPGIGYCQGLNRLAAIALLYLEEEDA
FWCMVCIVQYIMPAGYYSTTLIGSQTDQRVFKDLLGEKLPRLNAHLDHHDIDLSLITFNW
FITVYCDNIPAETMLRIWDTVLYEGNKVLFRFGLAFFKSCEDQLLQLKDYIEIFNFLRRM
PPMMSDIHRLAQIAFNELNPFPRRSINTKRLFHNQQVRLQLEELARMREEIAVNDRPNED
IMSDDEEEYDFVEALGTKT
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcccgacgggcatattaatatctttcggagatgagggacaggaaaaggtggca
atcaagccacacgaagaacccgtagctcctccaagaagatcaaggaaaatacgttcagtg
tccagtccgaatgctactgataccgtgcaagttgaagggagcaagggggtggtggttgat
caagatcaagtagggcctatgaaaaatactagggtaatttcgccaccacgccgaccacag
tcaatgccggtagtgccattagtgaaagtttcacaatcaggggacagtcaaattggaggt
acaatgattgaagaacgtactggagtatgcgaggtgcaacatcaaaaacagatgtcagca
acagaaaatccagaacctctgaaactgtgtggttatctcaataagttaggagagaagggg
ctaatcaagtcctacaaaacaagatggtttgtttatgacaaccaaagatgtcatctctac
tattatcgttctgcccatgatcttattccattagggtctatagatatttccaatgcatca
ttgaatttcaatgtggcaacagaagcaccaggacatttccaaatatgtacggaaggccgt
gtgtaccacctggaggccaaagatcgccagactaagatgttctggcttcaagaactgcag
caaagacgtcgggaatacagcgctcataggacaacattatccagagaaaggacatcatac
ctaacatcatccccagctgcgctacaccaaccgacaacgggccttgtgagtacgcagcgt
atcaaagcaaagcatggtgatccatggacaggattgccacctgtattggacagggtggag
cttcctacacattctatcggcgaagcaacagccaatgccattccacagacgggggtgttc
aatttctcactaactaatttgaagacagaaataagaaatcaaatgtctagttttcgatta
aaaggagtcccatcaacatctccagtagaagtaaacaagtactctcatgtggacgaagaa
gaagatgcaaatacaccttcaaaaccaagggcaagttctgttcgttccaccacctcagtg
cactctttggggtcagatggaggcgtttcacccactaccgattcaacaccgacagatcca
agcagacaaaaaagcatgggattgaaagctggattcatcaagaaactaggtcgaacaccg
agtgatgcaagttcaggctcatcagtatggtttgagaaccagcggaatggctgtccgaat
tgtgctaagcttcagatggaagtctcatcattgaaggaagaagtagacgtgatagaaggt
gaagtacaggccagtaaagaagtaattaatatgctacacaaacaactcactgctacacag
atggaaaaagctactacctctctttaccttgatagcaagacagatcaacagaagattatg
atactgcaaagaaaagataaacaactcattcaactggaacaattactacaagacatgaga
gatgacagggacaacataaaattacaactgggagactgtcagagggaggtacagaacttg
aaggaacagacagcaatgtttatggaaatgatagaagctaaagatgaagttgtggtatca
cttacaaacaggatccaagaactggagaaaaacgaagcgattcatgctgttgtaacacca
gggggtactacttcatttgaaagaagaccactgtcacctcagcctgacactgacactaca
aatgaaacccacacagtacccacagttttgggaggtgtagaccccaagctgcatgagaaa
ttaaaggacgccagtgaagcttttgagatgcagaataaattcttgaataacgagatcctg
gagttgaatcaactgagagatgatgatcttctgagagaaaatgacatgattgagaaatat
gctgatttagaggctgaacatctgaagacacagagtaaatatctgctggtattagatgag
ctgagagggcccaggagagagagtgaagaggctccatcaatgggcacagatgagattatc
tccagattaatagaagaagctattacaacagatccgttaaagaatagagaatccgtacta
tcaactgaccagcatgctaccagtgtaaaggaatcctacgatcgctatggcttcacccgg
caaccaagtgaagatgatgacggtgatgaagtaggctcaacgttaacagctaaagctgct
gtactcaagaaacgatctgaagaaatacagacattgcgttccaacacagaagtgtcgctt
gcagtcaaatgggagaattacctagtcactcatggtgatggagataaggaccttgttgga
acaccagagttgaagtccctagtcagagctggcattcctcacgagtacagggcgagaata
tggaaagcatgtgttgagtggcgagtaaagaaagataaagaaaccactggacccggttac
tatgagaggctgctcaaatcagagaattttaaatccaacccagcgaccaagcagatagaa
ctggatcttctacgcaccctccctaacaacaagcattatgataccattgaatcaccaggt
atacccaaattaagaagagtactgaaggcattcagtgtacatgacccagggattggctac
tgccagggattaaatcgtcttgcagctattgccttgctttatttagaagaggaagatgca
ttttggtgtatggtgtgtattgtacaatatatcatgccagctggttattacagcaccaca
ttgattggttcacagacagaccaacgagtcttcaaagatctactaggagagaaactacca
aggctcaatgcacatctagaccatcatgacattgatctttctctcatcacattcaattgg
ttcatcactgtttattgtgacaacattccagcagagacaatgcttagaatctgggacacc
gtgctttatgaaggcaacaaggtgctatttcgttttggacttgccttcttcaaatcctgc
gaagaccaactattacagctcaaggactacattgaaatcttcaatttcttgagacgaatg
cctcctatgatgtcagatatacatcgcttagctcagattgctttcaatgagctgaatcca
ttcccaagaagatctatcaataccaagaggctatttcataatcaacaagttcggttgcaa
ttagaggaactagcgcggatgagagaggagattgctgtgaacgacagaccaaatgaagac
atcatgagtgatgatgaagaagagtacgactttgtagaagccctcggtaccaaaacatag
DBGET
integrated database retrieval system
