Amphiura filiformis: 140136871
Help
Entry
140136871 CDS
T10871
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
afil Amphiura filiformis
Pathway
afil03018
RNA degradation
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140136871
09123 Folding, sorting and degradation
03018 RNA degradation
140136871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140136871
03041 Spliceosome [BR:
afil03041
]
140136871
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140136871
mRNA degradation factors
5'-3' decay
Lsm complex
140136871
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140136871
Complex C
U2 snRNP components
140136871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
140136871
NCBI-ProteinID:
XP_072014574
LinkDB
All DBs
Position
17:7105717..7110590
Genome browser
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADECDTQLLQDAARKEASQSKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctattttactcatttttcaagtccttagtgggaaaggatgttgtggtggaactaaag
aatgatctgagtatatgtggaactttgcattctgttgaccagtttctgaacatcaaacta
acagatatcagtgttacagatccagagaagtacccacacatgttatcagtgaaaaactgc
ttcatcagaggctcagtagtgaggtatgtgcagcttccagcagacgagtgcgacacacag
ttattacaagatgcagccaggaaagaagcatcacagagtaaacaataa
DBGET
integrated database retrieval system
