Amphiura filiformis: 140137301
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Entry
140137301 CDS
T10871
Name
(RefSeq) flap endonuclease GEN homolog 1-like
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140137301
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140137301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
Motif
Other DBs
NCBI-GeneID:
140137301
NCBI-ProteinID:
XP_072015044
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Position
17:complement(53928227..53953086)
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AA seq
897 aa
AA seq
DB search
MGVKDLWTILAPVKKHQPIASLKGQTIAVDLSIWVCESITVKHMQGKVVKPHLRNLFFRV
SNLLQLGIKLIFVIDGEAPELKWEEMSRRTQARYGAYGKGTKPQPKQTKKGGRSNFKVWL
KECQEMLAYLGIPCVQSKGEAEAMCAVLNSQQVADACLTEDGDAFLYGADTVYRNFTLNT
KDPHVDCYSMTDIRKELGLDRDKLIALALLLGCDYLPKGVVGVGKEQGCQLMKQLNDVSV
LERFEKWANGEINADCLSQVSKPSHCRVCNHIGTGKQHKKQGCGMCATHIACKEQPKDVI
CYCTWHVAQSNTEITQVERDVMRKAMKTAGFPFKPVIREYLDKYEVCPSSPLCWKRPQLT
PLQKFNLLKMDWPEDYTLDKVFPLITLYDLTSIGNGICKGKCLVLDSFVKTRTRQGVPCI
EVRWQRPDWDGEDPDSQYYNTIEREDLLAAAYADKYKEYMQDKEAKKSSKSKGKRKQKAD
LEADTDLACSQQPSSAPDSTAVDDASVDALVDGVMSLDISKSAETTHRDTEHLDTGQTTG
KMTTNSKNERTTSEKTHPKYRTTSEPVQGSQYSCDGDDTKAMRHLSTAPTRTITKQTSTK
VQKSANSSDLEFLDELLEYEASKSLESPNEQKQTVDLIGMGTRYSAKSQVEEDTVEAEML
PLFQRLCLKSAKGTGRSRREKVSLSSSVSKQQNQHFMESKRIGEQEIGNVGRTVQSEGNV
RKSKQGLPQKCEVIVIDSDDAQEEESLPDASPGDTRVDSKLESKTNGKNTTDISVQQNQE
NNFSSNAYQAVEGSSSLVTNLSKKESLKDVEKSLQMNVTTSTDCSPFFDINLTATGEYLL
ASFADDTAVADYKLIQQNVSEVIDDGKEMEDKSTVVTLLASLLMTQQLLITNLFSKM
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaaaagatttgtggaccatcttggctcctgtcaagaagcaccaacctattgca
tcactcaaaggtcaaactattgcagtagatctcagcatctgggtgtgtgaaagtatcact
gtcaaacacatgcaagggaaagttgtcaagccacatttgagaaatttgttcttccgtgta
tccaatttgttgcaacttggtatcaagttgatatttgtaattgatggagaagcacctgaa
ttgaagtgggaagagatgtctaggaggacacaagcaagatatggtgcatatggcaaaggg
acaaaaccacaaccaaagcaaaccaagaaagggggacgctctaacttcaaagtctggctc
aaagagtgtcaagaaatgttggcataccttggtataccatgtgtacaaagcaagggggaa
gcagaagctatgtgtgctgtacttaatagtcaacaggttgcagatgcatgtctaacagag
gatggtgatgcatttctctatggtgcagacacagtgtataggaatttcacactcaatacg
aaggatcctcatgtagactgctactccatgacagacataagaaaagaacttggtcttgac
agagataaactgattgccttagcattgttgctagggtgtgactacctccctaagggtgtg
gtaggggttggcaaggaacaaggatgtcaactgatgaaacaactcaacgatgtcagtgta
ttagaaagatttgaaaaatgggctaatggagaaattaatgcagattgcttatcacaagtg
tccaaaccatctcattgccgggtatgtaatcatatcggtacaggcaagcaacacaagaaa
cagggctgtggaatgtgtgctacgcatatagcatgtaaagaacaaccaaaagatgtgata
tgttattgcacatggcatgtagcacagagtaacacagagatcacacaagtagaaagagat
gtgatgagaaaggcaatgaagacagctggatttcctttcaagccagtcatcagggagtac
ctagacaaatatgaagtctgtccatcatctccgctatgttggaagcgaccacaactgaca
ccactccagaaatttaacctgcttaagatggattggccagaagattacaccctggacaaa
gtgtttcctctcatcaccctgtatgatctgactagcattggcaatgggatatgcaaggga
aaatgcttagtgctggatagttttgtgaaaacaagaacaagacaaggagttccatgcatt
gaagtgaggtggcaaagaccagattgggatggtgaggatccagactctcaatattacaat
accatagaaagggaagacctgctagctgctgcatatgctgataaatacaaagaatatatg
caggacaaggaagccaagaaaagtagcaaatcaaaagggaaaaggaaacaaaaggcagac
ttggaagcagatacagaccttgcttgtagtcagcaaccatcatcagcacctgacagcact
gctgtagatgatgcatcagtagatgctttggttgatggtgtgatgtccctagatatatca
aagtctgcagagactactcatagagacacagaacatctagatacaggtcaaacgactggc
aagatgacaaccaattctaaaaatgaaagaaccacatctgaaaaaacacaccctaaatac
aggactacttctgaacctgtacagggaagtcagtactcatgtgatggggatgacacaaag
gcaatgagacacctatcaactgctccaactagaactatcacaaagcaaacaagtacaaag
gtgcagaaatcagctaactcatctgatcttgaattcttggatgaactattagaatatgag
gcatcaaaaagtttggaaagcccgaatgaacagaaacaaacagttgatttaataggcatg
ggtactagatatagtgctaagagtcaggttgaggaggacactgttgaagcagaaatgtta
cccctttttcaaaggttatgtttaaagtctgctaaaggtactggtaggagtaggagagaa
aaagttagtctctctagctctgtgtctaagcaacaaaaccagcattttatggaaagtaaa
aggattggtgagcaggagattggtaatgttggaagaactgtgcaaagtgaaggtaatgtg
aggaaatcaaagcagggtttacctcaaaaatgtgaagttattgtaattgattcagatgat
gcccaagaagaggaaagtttaccagatgcttcaccaggtgatacaagagtagatagtaag
cttgaatccaaaaccaatggtaagaacacaactgacatctcggtacaacaaaaccaggag
aacaatttctcatccaatgcctaccaggcagtggaaggctcttcgtcattggtgacaaat
ttgtctaaaaaagaatcacttaaagatgtagaaaaatcactccaaatgaatgtaactaca
tccacagattgttcaccattctttgatatcaaccttacagcaacaggagaatatctattg
gcgtcgtttgctgatgacacagcagttgctgattataaacttattcagcaaaatgtgtca
gaagtgatagatgatggaaaagagatggaagataaatcgacagtagtcactctattggcg
tcgttgctgatgacacagcagttgctgattacaaacttattcagcaagatgtga
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