Amphiura filiformis: 140137552
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Entry
140137552 CDS
T10871
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140137552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140137552
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140137552
Complex C
U4/U6.U5 tri-SnRNP related factors
140137552
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
140137552
NCBI-ProteinID:
XP_072015365
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Position
17:26989932..27011445
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AA seq
395 aa
AA seq
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MPPKSNTLPIWGNESSMNLNPLILTNIQSSPYFKNELFKLKTYHEVIDEIYYKVGHLEPW
ERGSRQTSGQIGMCGGVRGVGAGGIVSSAYCLLYKLYTLKLTRKQINGLLTHTDSPYIRG
LGFMYLRYTQPPQDLWEWYEEYLEDEEEIDCKAGGGSTMTIGEMLRSLLTKLEWYSTLFP
RIPVPIMKDIERKMTVWRAQHLKAALEIKAAEEAAQQAETSERQASRERAIPRRTPSPHR
NHRSQSKEQGERKRHRSRSKERRPSPDREHRHGKDRNRERRHSRDRDRRQRSRSRDRNHR
DHRDRRERRRSRSRERRRSRERHRPSPSSHNHRQRSRERERGGEGGDDFARALQRERDRQ
QRERDRKDRRSRSRDRKHRSRSRSREASHKSSKER
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaaaagtaacacccttccaatatggggtaatgagtcctcaatgaatctgaac
cctctgatcttgaccaacattcagtcgtcaccgtatttcaagaacgagctgtttaaactg
aagacataccatgaagtcattgatgagatatactacaaggttggtcatttagagccgtgg
gagagaggaagccgtcaaacctctggacagattggaatgtgtggaggggttcgaggagta
ggagcaggtggtattgtttcctcagcatactgtctattgtataagctgtacacactgaaa
ttaacacgtaagcagatcaatggactgctgacacacacagactcgccatatatacgtgga
ttgggattcatgtacctcaggtatacacaacctcctcaagatctgtgggagtggtacgag
gaatacttggaagacgaggaggaaattgattgcaaagcgggtggtgggtctaccatgact
attggtgaaatgctgcgcagtcttctcaccaaattagagtggtactcaactctgtttcct
cgcattccggtgccaattatgaaggacatagaacgcaagatgacggtttggagggcacag
cacttgaaagcagcattggaaattaaagcagcagaggaagcagcacaacaagctgaaaca
tctgagagacaggccagcagagagagggcgatacctcgcagaacacctagtccacatcgt
aatcatcgcagtcagagcaaagagcaaggagagagaaaacgacatagaagtcgaagtaaa
gaacgcagacccagtccggacagggaacacagacacggtaaagaccgcaacagggaacgt
aggcacagtagagatcgcgatagaaggcagcgtagtcgtagcagagatagaaatcacaga
gaccatcgggatcgtagggaaaggagacgaagcaggagtagagagcgaagacgaagcagg
gagcgacaccgcccaagtccatcatcacacaatcatcgtcagagaagccgcgaacgcgag
agaggcggtgagggtggcgacgatttcgcaagggcactacagagggagcgggataggcaa
caaagagaaagagataggaaggatcggagaagcaggagtcgagatcgtaaacataggtct
cgtagtaggagtagggaagcaagccacaagagcagcaaagagaggtaa
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