Amphiura filiformis: 140137804
Help
Entry
140137804 CDS
T10871
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1-like isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140137804
04121 Ubiquitin system [BR:
afil04121
]
140137804
Enzymes [BR:
afil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140137804
Membrane trafficking [BR:
afil04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
140137804
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140137804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
zf-C3HC4_3
SAM_1
SAM_2
Prok-RING_4
LRR_LRWD1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
140137804
NCBI-ProteinID:
XP_072015687
LinkDB
All DBs
Position
17:complement(41755272..41798243)
Genome browser
AA seq
804 aa
AA seq
DB search
MGVVLSHPSEEGYRVSSSVTAVNGAGQPMDVNMPKLLKHRQSAEAKKKMEHQKYLAKESP
EPTYDLSQCELPEVPAGTYSLCKVLLKEVLILNDNYLSCLSGGGSVKDLMSIRVLDIHKN
EITEIPEEICELCNLQVLNMESNKLKKLPKGLGRLQALQTLNVRGNSLKELPDSMCEMKS
LRTLDIGNNKIKVLPGRLCEIRTLETINLDGKDMKYPPANTCLLGTESIMKFLCSECNLE
YTPPSQHVLNVLAAPTLGAPNKNLEADRVKLDAMSTSVMNYEKIKAAKKPDANVLSDTKQ
IFYAEQKRLERQKLERDLAALDIEHAKIVAKSNMDRGRLLESLAKDQEKMDTGIKSLQAR
SDTEKKRLVASLYDVEQRASNLVSQLLTMNEAARKKEALLDKMEKERMEMDDYFKIVAEE
HDHLRENDIIKSMKITLQSNFDLEDLRQRYEANKDTILRKAQQSEVEAFEKLDMQLNTQQ
INKDTLVSKLMQDEVFQRDAFEILFQAKDAKHKRLTDEIFMVQQQLAELTMMEIQKKSLK
AENENIALEQKRSDLAGLLKQLMFERDDREQELKKRLEEMEKKRVEDEQDYWLIQYQRLL
DRKPESLIDQENQLEFAVCDILTSAGAEDYIPKFARHRVSIETMVQMTDEDLREMGIHEL
GLRRAIISSIDDYLESQRRAVAKAAELEKPYESPYEKPYEKPYEGGPSAPPLAYDDKKWE
EAGASAPPVEAGASMYQPVKEDVTVRVNAECVVCLERASDSLFLNCGHVCCCQVCAEPLF
KCPLCRADIISKINMAQFQQVPVA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgggagtagtactaagtcatccaagtgaggagggatatcgtgtatcttcatcagtaaca
gctgtaaacggtgctgggcaacctatggatgtcaacatgcctaagttgttgaagcataga
cagagtgccgaggccaagaagaagatggaacatcaaaaatatctggccaaggaatcacca
gaacctacgtatgatttgtctcaatgcgaattaccagaggttccagccggcacatactca
ttgtgtaaagttctgttaaaggaggtattaatacttaatgataattacttgtcatgtctg
tctggaggaggatcggtaaaagatttgatgtcaattagggtgttggatatacataaaaac
gaaatcaccgaaataccagaagaaatctgcgagctgtgcaatctacaagttctcaatatg
gaaagcaacaaattgaagaaactcccaaagggtttaggaagactgcaggccttgcaaaca
ctcaatgtgagaggtaacagcttgaaagagttgccagacagtatgtgcgagatgaagtca
ctgagaacattagacataggaaacaacaaaatcaaagtattaccaggcagattatgtgaa
atcagaacactagagactataaatttagacggcaaagatatgaagtatccgcctgcaaac
acatgtttactggggacagaatctatcatgaaattcctatgctcagaatgcaacctggag
tacactccaccatcacagcatgtattgaatgtactagctgcacctacattaggggcacca
aataaaaacttggaagcagacagagtaaagctagatgcaatgtcaaccagtgtcatgaat
tatgaaaaaattaaggcagcaaagaaacccgatgctaatgtgttgtccgataccaagcag
atattttatgctgaacaaaaaagattggaaagacagaaattggagcgagaccttgctgcc
ttggacatagaacatgctaagattgtagccaagtcaaatatggacaggggaagattattg
gagtcattagctaaagaccaagaaaagatggacactggcatcaagtcactgcaggcaaga
agtgatacagaaaagaagcgacttgtggcatcactctatgatgttgaacaaagagcgagt
aatcttgtgagccaacttctaactatgaatgaagcagcgagaaagaaagaagcattgcta
gacaagatggaaaaagaaagaatggagatggacgattatttcaagattgtagcagaagaa
catgaccacttgagagaaaatgacatcatcaaatcaatgaagataacgttacagagtaac
tttgacttggaagacttaagacaaagatatgaagccaacaaagatacaatactaaggaaa
gcacaacaaagtgaggttgaagcctttgagaagttagatatgcagctgaacacacagcaa
atcaacaaggacacattagtcagtaaattgatgcaggatgaggtgttccaaagggatgca
tttgagatcttattccaagcaaaagatgcgaagcataagagactcacagacgagatcttc
atggttcagcagcaacttgcagagttaacaatgatggagatacagaagaaatccctgaaa
gctgagaatgaaaatattgccttggaacaaaagagaagtgatttggcaggtctcttaaaa
caactcatgtttgagagagatgatagggaacaagaactcaagaaaagactggaagagatg
gagaagaagagagtagaagatgaacaagattattggttgatccagtatcaaagattactg
gataggaaaccagaatcactgattgatcaggaaaatcaacttgagtttgctgtatgtgat
attctgaccagcgccggggcagaagactacattcctaaatttgctagacatcgtgtttcc
atagaaacgatggtacagatgacggacgaagacttgagagagatgggaattcacgaactc
ggcctgcggcgtgcaatcatctcttccatcgacgactatttggaatctcaaaggcgagct
gtagcaaaggctgcagagttagaaaaaccatatgaaagcccatatgaaaaaccatatgaa
aaaccatatgaaggtggtcctagtgccccgcctcttgcgtatgatgacaagaaatgggaa
gaagccggggcatcagcgccacctgtggaagcgggtgcgtcaatgtatcagccagtcaag
gaagatgttacagttagagtgaatgctgaatgtgtagtgtgtctggaaagagcgtcggat
tctcttttcctcaactgtggccatgtatgctgctgtcaggtctgcgcggaaccactcttc
aagtgtcctttgtgtcgtgctgacataatatccaaaattaacatggcacaattccagcaa
gttcctgtcgcataa
DBGET
integrated database retrieval system
