Amphiura filiformis: 140137808
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Entry
140137808 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140137808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140137808
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140137808
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
140137808
NCBI-ProteinID:
XP_072015694
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Position
17:complement(41861114..41960716)
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AA seq
487 aa
AA seq
DB search
MSLADELLADLEEIAEEGEDEDLNDGEMNDEIEDIDEMEIETKMDSVRNIAKLRHSAELA
NVLSQIEHFQKNPRNGEAIGPVESDPEYKLIVQANNLSVEIDNEINIIHKFVRDNYAKRF
PELESLVPTAFEYLKTVKELGNELEKXKNNERLQEILTNAVIMVVSVSASTTQGTELSEN
ELAIVFEACDMAFDLNDAKANIFSYVESRMSFIAPNLSIIVGASTAAKIMGAAGGLTNLT
KMPSCNILVLGAQRKTLSGFSSIATNPHTGYIFYSDLVQGTNPDLRKKAARLVSAKCTLA
ARVDGFHESPTGEIGENLREEIERKLGKLQEPPPPKQAKPLPAPVDLPKKKRGGRRVRKM
KAKMGMTDMRKAANRMTFAEIEEDAYQEDLGFXLGQVGKAGTGRIRGPQVDNKTQVKLSK
SLQRQLQKQQQHGGRSTVRGRETSGTASSVAFTPLQGLEIVNPNAAEKNVAEANARYFSA
TTGFQKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagatgaactcttggctgatctggaagagattgcggaggaaggggaggat
gaggacctcaatgatggagaaatgaatgatgagattgaggatattgatgagatggagatc
gaaacaaagatggactcagtccgaaatatcgccaaattaagacatagcgcagagttggcc
aatgttttgtctcaaatagagcatttccagaagaaccccaggaatggagaagcgattgga
ccagttgaatctgacccagagtacaagttgatagtacaggctaataaccttagtgtggaa
attgacaatgaaataaatatcatccataaatttgttcgagacaactatgccaaaagattt
ccagagctggagtccttggtacccacagcatttgaatatcttaaaacagtcaaagaactt
ggtaatgaactagaaaaanctaagaacaatgaacgtctgcaagagatcttgactaatgca
gtcatcatggtggtgagcgtgtctgcatcgaccacacaaggaacagagcttagtgaaaat
gagctggccatagtatttgaagcctgtgatatggcttttgatttaaatgatgccaaagct
aatatcttttcctatgtagaatctcggatgtcattcattgcaccaaatctctctattatt
gttggagcatcaactgcagctaaaataatgggtgcagccggtggactgacaaatttaacc
aaaatgccatcgtgtaacatcttagtcctgggagcccaacgcaagacgttatcaggcttc
tcaagcatcgccaccaatcctcacacaggctatatcttctattctgatttggttcaagga
actaacccggatttgagaaaaaaggcagccagacttgtgtcggcaaaatgtacattagca
gcacgagtagatggttttcatgagagtcctacaggggaaataggagagaatctcagggaa
gaaatagagagaaaactaggcaaattacaagaaccaccacctcccaaacaagccaaaccg
ttaccagcgccagtggatttgccgaaaaagaagaggggtggacgaagggtgagaaagatg
aaagccaaaatgggcatgacagacatgagaaaagccgcaaataggatgacttttgccgag
atagaagaggatgcgtatcaagaagatcttgggtttnctctgggtcaggttggcaaggca
ggcacagggagaatacgaggaccacaggtggacaacaagacacaggttaaattatcaaag
agtttacagagacaattacagaagcagcaacaacacggtggcagatcaacagtgcgtgga
agagaaacatctggtacagcttccagtgtggcatttacaccattacagggtctggagatt
gtcaatcccaatgctgcagagaagaatgttgccgaggctaatgcaagatacttttcagcg
acaactggcttccagaaactctaa
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