KEGG   Amphiura filiformis: 140137928
Entry
140137928         CDS       T10871                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
afil  Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:afil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afil03000]
    140137928
   04121 Ubiquitin system [BR:afil04121]
    140137928
Transcription factors [BR:afil03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    140137928
Ubiquitin system [BR:afil04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    140137928
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-CCCH_4 zf-RING_2 zf-C3HC4_4 zf-C3HC4 Prok-RING_4 zf-C3HC4_2 zf_CCCH_4 zf-CCCH zf-RING_10 Fer2
Other DBs
NCBI-GeneID: 140137928
NCBI-ProteinID: XP_072015835
LinkDB
Position
17:50734105..50772119
AA seq 1327 aa
MPMIQTPQWTEFLSCPVCYHEFNENIRRPISLGCGHTVCKTCLSQLQRKQCPFDQSPITQ
DIDDLPANYALLQLVGAEVTVEEQKIPANVVSKYMKHYAEAKACIEELALYLKPLGVGGA
GSSNCILSRPMQRKLVTQINCQLVEEERRSRAMRAARSIGERTVTELMLQHQNTQQLSAN
LWAAVRARGCQFLGPAMQEETLKLVLLALEDGAALSRKVLVMFVVQKLEQQFPQASKTSV
GHVVQLLYRASCFKVTKREEESSLMQLKEEFRNYEALRREHDAQIVQIAMEGGLRISPEQ
WSSLLYGDLNHKSHMQSIIDKLQTPASFTSSIQELTIALQRSGDPANLGKLRDHLKLLAN
INPIPELELPAWEDVEYAMISTKIVVHGLVEFISHHSHTKKILEQQQTQNIKYKTSMCRD
ITQKGGCPRGNNCTFAHCEDELDKYRSKSRRLLSTINRQNSNQSVRSTMSQSSMIGGRML
SRGMSSPPLDKYINTAAIVDPEADDGLINERKMTRDAVLGYSPHHGVISPEPDERPGKYP
PHAMGDMQVPYRPPDHYDQYGRDRHGYPTGMPPTPSTPPPHPSSTTQYGRMLHGVPKDQY
ITKPPVYRHQDSGDDYMHPPHVINRESHPSPLHYEGVRRVPDHPGPMLRYPSPLHSDHDT
DRYHHGHLLSDKSDGFQEDLSAFSRHDNGWTKSEELEYPLQDLERNEKAHDKTKMRPFLN
SIETPANIPTNLVELQQRQKEIVAKLNDYQVKSPWEHSALTTVVSSNQGRPKSSVVIDEA
RRRPAHTTSRHSSYDATHGYKYFDPWTSTAPFVFFKPVKELNTKYTMTVSKSQIKHVSAN
ETEQMALEKPHQGKEHPEFTNMDLAELKKTLEKVKLQDHHTGCTHFERSQELNQELKRRE
HCGRPDLPCTDPSHHVVSPFIQEEYIPQIWGPPVSRASRTSFKITPPVKVNAGPTGPGGG
APCTPVSFNWNNQMVPVAGQSPVADKNLDMNMFHRDTINREDIPRDNVPRGDIPRDTVPR
DEPRDAVTRDAIHRDAIHKDAIHRESIHREAVIVTSVEQRNESGNPVKTQLELEHELAQV
KTKIAQQKTAKTANDAFLIQRESRALGETRLSMPPPDITHLQVQKDMEIAKRLQSEEFKG
ARPLSPDSPNTFTMDQDFPPLDRDILENQARDKRLLIHEQQARDIRLSQEQQAREKRLLQ
EQQARDKKLAEQVHRYEQERAQRFEQEKAMRMRSYNQRRPRYDDDMLHQGHAQQYQQQWQ
QQQQSHQQQQQSHQQRYQEQQIRQQQEQEDQMLARQVARDEARAIGVRLPPENKGYRGGA
SAYPWPK
NT seq 3984 nt   +upstreamnt  +downstreamnt
atgcctatgattcagacacctcagtggacagagttcctgtcttgtcctgtgtgctatcat
gaattcaatgagaacattagacgtcccatcagtctgggatgtggccacacagtgtgcaag
acatgtctctcacagttgcaacgaaagcagtgcccatttgaccagtcaccaatcacacaa
gacattgatgatctgccagcgaactacgccctcctacagcttgtgggagctgaagtcacg
gtggaggaacagaagatacctgctaacgtggtatcaaaatacatgaaacactatgctgaa
gctaaggcctgtattgaagaacttgccctgtatctaaagccattaggtgttggtggtgct
ggtagcagtaattgcatcctgagtcgtcccatgcagcgcaagctggtcacccaaatcaac
tgtcaacttgtggaggaagaaaggcgttcaagagccatgcgtgcagccagatctattgga
gaaagaacagtgacggagttgatgctgcaacaccagaacacgcagcagttgtctgctaac
ttatgggctgctgtaagagcaagaggttgccagtttctagggcctgccatgcaggaagag
acactaaaactggtgcttctcgcattggaggatggcgctgctctgtcacgcaaagttttg
gtgatgtttgtggtacagaaactggagcagcagtttccccaggcatccaagaccagtgtg
ggtcatgttgttcagttgctatacagagcatcttgttttaaagtaaccaagagagaggaa
gaaagttctctgatgcagctcaaggaagagtttcgtaattacgaagccctgagacgtgaa
cacgatgcccagatagtacagatagcaatggaaggtggtttgcgcatctcaccagagcag
tggtcatctctactgtatggagatctcaaccacaagtctcacatgcagtctattattgac
aagcttcagacaccggcatcatttacctccagcatacaagagctaaccatcgctttacag
agatctggtgacccagccaatcttggtaaactgagagaccatctcaaactattggccaat
atcaatcctattccagaactagaactaccagcctgggaggatgttgaatacgctatgatt
tcaaccaagatagtagtccatggcttagttgagtttatctcccatcacagccacactaaa
aagatacttgaacaacagcaaacccaaaacatcaaatacaagacaagtatgtgccgtgac
atcacacaaaaaggaggttgccctcgtggcaataactgcacctttgctcactgtgaagat
gaactggacaagtaccgttccaaaagtagacgtttgctttctaccatcaaccgtcagaat
agcaaccagagtgtgcggtctaccatgtcacagtcatctatgattggtgggagaatgttg
tcacgtggcatgtcgagtcccccattggataaatacataaatacagctgcaatagtagac
ccagaggcagatgatggactcatcaatgagaggaagatgacaagggatgctgttttgggg
tacagtccacatcatggcgtaatctctccagagcctgatgaacgacctggtaaatatcca
ccacacgctatgggagacatgcaagtaccatatagaccacctgaccattatgatcaatat
ggtagggatcgtcatggttacccaactggaatgccacctactcccagcacaccgccacca
catccctcgtctaccactcagtatggacgcatgctgcatggtgtcccaaaagaccagtat
ataaccaaaccacctgtatacagacaccaagatagtggagacgattacatgcatccacca
catgttatcaacagagagtctcatccttcacccctccactatgaaggggtcaggagggtg
ccggatcatccagggccaatgctcagatacccatctcccctgcactctgatcatgacaca
gatcgttatcatcatggacacttgttgagcgacaagtcggatggatttcaggaggatctg
tcggctttctcaagacatgacaacgggtggacaaagagtgaagagttggaatatccgtta
caagatttagagaggaatgaaaaggcacacgataaaacaaagatgaggccatttctaaat
agcatagaaacaccagctaacatcccaaccaacctggtagagctacaacaacgccagaaa
gaaattgttgccaaactcaacgattaccaagtgaaatccccttgggagcattctgctctt
actacagtagtatcatccaaccaaggaaggcctaaaagctctgttgtaattgacgaggca
aggagacgccccgcccatacaacgtcaaggcactcaagctacgatgcaacccacggatat
aagtactttgatccctggacaagcacggcaccttttgtgttctttaagccagtcaaagaa
cttaatacaaagtatacaatgacagtaagcaagtcgcaaatcaaacatgtttctgccaat
gaaactgaacagatggcactagagaaaccacaccaaggtaaagaacatccagaattcact
aatatggacttagcagagctgaagaaaaccttggagaaagttaagttgcaagatcaccac
actggttgcacacattttgagcgtagccaagagcttaaccaagaactgaagaggcgagag
cactgtggaagaccagacttgccttgcaccgatccgtctcatcatgttgtctccccattc
attcaggaagagtacatacctcagatatggggtccacctgtctcaagagcatcacgtaca
tcattcaaaattacaccccctgttaaagttaatgcaggaccaactggtcccgggggtggt
gcaccatgcacgccagtgagttttaattggaataatcagatggtgccagtagctggccag
tcaccagtagcagataaaaatttggacatgaacatgttccatagagacactatcaacaga
gaagatatccccagagacaatgtccccagaggcgatatccccagagacactgtccccagg
gacgaacctagagacgctgtcaccagagacgctatccacagagacgctatccacaaagac
gctatccacagagaaagtatccacagggaggcagtgattgtgacttcagtggagcagaga
aatgaatctggaaatccagttaagactcaactagagttggaacatgagttggctcaagtc
aaaacaaagattgcccaacaaaagactgccaagacggctaatgatgcatttttgatacag
cgtgagagcagggcgttgggagagacacgtctatctatgcccccaccggacataacacac
ctgcaggttcagaaagatatggaaatagccaagagactacaaagtgaagagttcaagggt
gccaggccgctgtcacctgactcacctaacaccttcaccatggatcaagactttccacct
ctggacagggacattttggagaatcaagctagagacaagagactattaatacatgagcag
caagctagggacataaggctatcacaggagcagcaagctagagagaagagactattacag
gagcagcaagctagggacaagaagttagcagaacaagtccatcggtatgagcaggaaaga
gcccaacgttttgagcaggaaaaagccatgagaatgagatcatacaaccagagacgtcca
cgctatgatgatgacatgttgcatcaaggtcatgcgcagcaatatcagcagcaatggcag
cagcaacagcaaagtcatcagcagcagcagcaaagtcatcagcaacgttatcaggagcaa
cagatacgacaacaacaagagcaggaagaccagatgctggcacgacaggtggcacgggat
gaggctagagccataggagttaggctgccaccagaaaacaaaggatatagaggcggtgct
tcagcatatccatggccaaaataa

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