Amphiura filiformis: 140137944
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Entry
140137944 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
afil Amphiura filiformis
Pathway
afil00310
Lysine degradation
afil00514
Other types of O-glycan biosynthesis
afil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
140137944
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
140137944
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afil01003
]
140137944
Enzymes [BR:
afil01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
140137944
Glycosyltransferases [BR:
afil01003
]
O-Glycan biosynthesis
O-linked Gal type
140137944
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
ODC_AZ
Motif
Other DBs
NCBI-GeneID:
140137944
NCBI-ProteinID:
XP_072015851
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Position
17:51766003..51802083
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AA seq
670 aa
AA seq
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MEMYWVLKLFAWTVCLVVIGVNSDTSSEGDSGNTQSDSADVDEKQMPTVFIPILVRNKAH
XLPYFFGCLERLHYPRNRISLWIRTDHNVDNSTAMLKEWVANARPYYHKIDFQYKQYPQR
YLGESGPVDWPDERFEHVISLRQQALEEARKQWADYLFTIDVDNFLENPDVLWVLMHNEK
TIIAPVLESSTMYSNFWGGMKENGYYKRTNTYLQIIRRNITGIFNVPMVHSTVLINLKHS
ATEKLTYKPPPSYRQHLDDILIFAYSAREAGIPMYVVNAVHFGQLLVPTAADASLEDEVE
QMLHVKLQTIVENPPLPSSVLMHEPVRPVDKLGFDEIYMINLKRRPLRRQRMLHSLKWLG
IEAKEFDAVDGKALTSDDLISMGIDMLPGYRDPYSERVLTKGEIGCFLSHYKIWQEMVQN
NYQEILVLEDDVRFEEGFRPKLMNILTDVALAQVDWDIIYVGRKILNIDEEQYVSGVRNF
VRPGYSYWTLSYILTQRGAKKLLAQEPLGRMVPIDEYLPIMFDKHPEKTWLSAFWPRDLK
AFSVNPLLVQPTHYIGDNNYFSDTETSNIWEDVHERENGGSNEKKGDPAAGKDSLEENDA
DSPQDHFKMPTADSKEDGKGVNLTATDHAKEEGKEQKIEKTPIASSGEEKIPKNEKQAET
VEQSRQQDEL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagatgtactgggttttaaaacttttcgcctggactgtgtgtttggtagtgatcggt
gtcaattcagacacctctagcgaaggtgacagcggaaatacacagagtgattctgccgac
gtggacgagaagcaaatgcccactgtctttataccgatactcgtacggaataaagcacac
nnattgccttatttctttggctgccttgagagactacattaccccagaaatcggatatca
ctgtggatcagaactgatcacaatgtagacaactccaccgcaatgctgaaggagtgggtt
gctaatgcaagaccatactatcataaaatagactttcaatataaacagtatccgcagaga
tatctgggtgagagtggtcctgtggactggcctgatgagagatttgaacatgtcatatca
ctgagacagcaagcattggaagaggctagaaagcagtgggcggattatttatttacaatt
gatgtggacaactttttggagaatcctgatgtgttgtgggttctgatgcacaatgaaaaa
acaatcattgcacctgtattggagtcatctactatgtattcaaacttctggggaggaatg
aaggaaaatggctactataaacgaacaaatacctatttgcaaataatacgacgtaacata
accggaatatttaatgtgcctatggttcattctacagtactaataaacttgaagcatagt
gcaacagaaaaattgacatataagccaccaccaagctatagacaacacttagatgatatt
ctcatatttgcttattctgcaagagaagcaggtatccctatgtatgtagtcaatgcagta
cattttggtcagctgctagtacccacagcagcagacgcttcactagaggatgaagtggaa
caaatgctgcatgtcaagttacaaaccatagttgaaaacccaccattaccatcatcggtg
ttaatgcatgagccagtgagaccggtagataagcttggttttgatgagatttacatgatt
aatcttaagaggagaccactaaggagacagaggatgctgcattcattaaaatggctgggt
atcgaagccaaggagtttgatgctgtggatggaaaggctcttactagtgatgacctcatc
tccatgggaatagacatgttgcctggttacagggatccatactcggagagggtgctcact
aaaggagagattggatgctttcttagtcactataaaatttggcaagagatggtacaaaac
aattaccaagaaattttggtgctagaagatgatgtcaggtttgaggaaggctttcgaccc
aaattgatgaatattcttacagacgtggctctagcccaggttgattgggatataatatat
gtcggtcgcaaaattctgaatatagatgaggagcagtatgtctctggcgtgcgtaatttt
gtgagaccaggttattcatactggacacttagctatatactaacacagagaggggcaaag
aaactcttggctcaagaacctttaggaagaatggtccctatagatgaatacctgcccatc
atgtttgataagcatccggagaaaacctggttatcagccttctggccacgggatctgaaa
gcattttctgtcaatccacttctagtacaacctactcattacataggggacaataattat
ttcagtgacacagaaacatccaatatatgggaagatgtccacgaaagagaaaacggtgga
agcaatgagaaaaagggagacccggcagcgggcaaggatagtcttgaagaaaatgatgca
gattcgcctcaagatcatttcaaaatgcccacagctgattctaaagaggatgggaagggt
gttaatcttactgctacagatcatgctaaggaggaagggaaagagcagaaaatcgaaaaa
acacctatcgcttcctcgggagaagaaaaaataccaaaaaatgaaaagcaagctgaaact
gttgagcaaagtagacaacaagatgaactatga
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