Amphiura filiformis: 140137954 Help Entry 140137954         CDS       T10871                                  Name (RefSeq) DNA-binding protein SMUBP-2-like   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism afil  Amphiura filiformis Brite KEGG Orthology (KO) [BR:afil00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:afil03009]     140137954    03012 Translation factors [BR:afil03012]     140137954 Enzymes [BR:afil01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      140137954     5.6.2.5  RNA 5'-3' helicase      140137954 Ribosome biogenesis [BR:afil03009]  Eukaryotic type   Other ribosome biogenesis factors    140137954 Translation factors [BR:afil03012]  Eukaryotic type   Initiation factors    Initiation associated factors     140137954 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_19 AAA_30 zf-AN1 Viral_helicase1 nSTAND3 ResIII DEAD AAA_22 UvrD-helicase AAA_16 DnaB_C PhoH Flavi_DEAD AAA AAA_25 Glyco_tranf_2_3 RuvB_N UvrD_C_2 IstB_IS21 Motif Other DBs NCBI-GeneID:  140137954 NCBI-ProteinID:  XP_072015866 LinkDB All DBs Position 17:52653732..52682743 Genome browser AA seq 1052 aa AA seqDB search MAVQEFVTKQNELLALEREAEIEESSTLLENVSSKELQRRGVCLLKLHISNQSTGLYGRT LLTFELPKGHGDGKLPTHTFSSGDIIGVGPVHGSPSSQVASGIVSRVGTSFITVAFEEQT DELTVDNGQLYQLTKLANDVTYKRIKRALEELESYHAGPASHLIDVLFGDAEVSPPTITQ PLDDPLAPIHFYNERLDDSQKEAVQFALAQRDVAIIHGPPGTGKTTTVVEIILQAVRNKL KVLACAPSNVAVDNLVERLVAGKAKVVRLGHPARLLHSIQKYSLDALLDSSDGAKIVQDV RRDMDQTKAKIQKTRDKNERHKLRNEAKFLRKELRERENHVIRDVLTHVDVVLATNTGAT SSGPLKQLSNDHFDLVVIDECAQALEASCWISLLKGPRCVLAGDHQQLPPTIISKRAAKD GLALSLMERLIGNHGDKIVRMLTTQYRMHSDIMDWPSAQLYSNKLTAHESVSGHLLKDLS SVTESENTSIPMLLIDTAGCDFHELDLQEELSKGNEGEADLVTLHVKSLIESGVDQSDIA VIAPYNLQVDLLRLRLSNQYPKLEIKSVDGFQGREKEAVVISLVRSNQKGEVGFLSEDRR INVAITRARRHLAVICDSETVSHHEFLKSLIEYLMAKGEVRTAFEYQQDMNSALLDVSRP DYLVFKKQHTTSTEKSNKGARPKQPKTRKQDHGHKTTQHHDRKKPDDKRKLEGSISGKKV TSEDVQESIEDIPGYVELKKQIDEFVADKERSRMEFSSGLTSRERYIVHELAEQTGVAHQ STGEGSERHITVSKMITHAGHKQAKTGNKVDENNKEHSKVTVKELKRAIKEIETENKMSV LAELPTMENEPSNEHSTEIVDNKQVSGNHNNANATRTLYKDDGTLPCKYCGVGLLPGNHL LHEIHCEKIHEEKLQKAKRQQAKRKIDKSKQKQALENTKEEDFDKLIAMAKKADNVCNYR KCKEKITALGQLCEFCNKRYCFSHHIPEVHGCGDMARAKARQITRQQKVVTPGSGKKEKK VDPAHKAHLERKLDAKLSEMGQKRGRKSGKKK NT seq 3159 nt NT seq  +upstreamnt  +downstreamnt atggcagtgcaagaatttgtcaccaagcaaaatgagttgttagctttagagagagaagca gaaatagaagagtcaagtactttactagaaaatgtctcctccaaagagcttcagcggcgt ggtgtttgtctgctgaagctgcacattagcaaccaatcaactggcttatatggaagaaca ttgctgacctttgaactccccaaaggacatggcgatgggaaactgccaactcacacattc agttcaggtgatatcattggtgttggtcctgtacatggaagtccgtcatctcaagtggct tctggcatagtgtccagggttgggacttcatttataacagtagcctttgaggagcaaaca gatgaactcacagtcgacaatggacaactttatcaactcacaaaattggctaatgatgtc acttacaaaagaataaaaagagcattagaggaattagagtcataccatgctggtccagcc agtcatcttattgatgtactatttggtgatgcagaagtcagtccaccaactatcactcag ccactggatgacccactagcaccaatccatttctacaacgagagactagatgattcccag aaagaagccgttcaatttgccttagctcagagagacgtagccatcattcacgggcctcca ggcactggcaaaactactacagttgtggaaatcatcctacaggctgtccgtaataagctc aaggttcttgcctgtgctccctccaatgttgcagtagacaatctagtggaacgattagtc gcaggcaaggctaaggttgtgcgattaggacatccagctagactcttacacagcatacag aagtactcactagatgccttattagattcaagcgatggggcaaagattgtgcaggatgta cgcagagatatggatcagactaaggcaaagattcagaaaaccagagacaagaatgagagg cataaactacgcaatgaagccaagttcttacggaaggagttgcgtgaaagagaaaatcat gtgatcagagatgtgttgacacatgtagatgtggtgttggcgactaacacaggagctact tcaagtggaccgctgaaacagttgtctaatgatcactttgatcttgtggttatagatgaa tgtgcacaggcattagaagccagttgctggatatctctgttgaaagggcctcgctgtgtg ctagctggtgatcaccaacagcttccaccaacgatcatttcaaagagagctgcaaaagat gggcttgccttgtcgcttatggaacgcctcattggtaaccatggtgataagattgtgagg atgttgacaactcagtatcgtatgcatagtgatatcatggattggccatcagcacaactc tatagcaataagcttacagctcatgagtcagtatctggacatcttttgaaagatttatcc agtgtgacagagagtgagaacactagcattcctatgctattgattgacacagctggctgt gattttcatgaattagatctacaggaagaattgtccaaaggaaatgaaggtgaagctgac cttgtgacattacatgtcaagagcttgattgaaagtggtgttgatcagagtgacatagct gttatagcaccatacaacctacaggttgatctgttaaggttacggctatccaatcaatac cccaagctagaaatcaaatctgtagatggtttccaaggaagggaaaaagaggctgtggtt atttctcttgtaagatctaatcaaaaaggagaagttggatttctctctgaagatagacgc ataaatgttgccatcacaagagcaaggcgccacctagcagttatttgtgattcagaaacg gttagccatcatgagtttctcaagagcctgattgaatatcttatggctaaaggagaagtg aggactgcctttgaataccaacaagatatgaactcagccttactagatgtgtcccgtcct gactatcttgtgttcaaaaaacagcatacgacttcaacagagaaaagtaacaaaggtgca agacctaagcaacctaagaccaggaagcaagaccatggtcacaagaccacacagcatcat gacagaaagaaaccagatgacaagaggaaattagaaggcagtatcagtggcaagaaggtt acatcagaggatgtccaggagtctatagaagatattcctggctatgtggaactcaagaaa cagattgatgagtttgttgctgataaggaaaggtcacggatggagttctcctctggactc acttcaagagaaagatatattgtacatgagcttgctgagcagaccggtgtagcccatcag agcacaggggaaggttcagaaaggcacatcacagtaagcaagatgatcacccatgcaggt cacaagcaggcaaaaactggcaataaggttgatgaaaataacaaggaacacagcaaggtg actgttaaggagttgaagcgcgcaatcaaagaaattgaaacggaaaacaaaatgagtgtt cttgccgagttgcccaccatggaaaatgaaccaagcaatgagcatagtactgaaatagtt gataacaaacaagtttctggtaatcacaacaatgctaatgctacaaggacgttatacaaa gatgacggcacattgccgtgtaaatactgtggtgtaggactcctcccaggtaatcatcta cttcatgaaatacactgtgagaaaatacacgaagagaaacttcagaaagctaaaagacaa caagccaaacggaagatcgataaaagcaagcaaaaacaggcattagaaaacactaaagaa gaggactttgataaactgatcgcaatggctaagaaagcggataatgtatgcaattatcgg aaatgcaaagaaaagatcacagctttggggcaattgtgtgaattttgcaataaaaggtat tgttttagtcatcatatcccagaagtacatggatgtggggatatggccagggctaaagca aggcagatcaccaggcagcagaaagtggtcaccccagggagtggcaagaaggagaagaaa gtcgatccagctcataaggctcatttggagagaaaattagatgcaaaattgagcgaaatg ggacaaaaaagaggtagaaaatcaggaaaaaagaaatga

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