Amphiura filiformis: 140138660
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Entry
140138660 CDS
T10871
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140138660
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140138660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
FliD_C
DUF7226
Motif
Other DBs
NCBI-GeneID:
140138660
NCBI-ProteinID:
XP_072016501
LinkDB
All DBs
Position
18:37630402..37702883
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AA seq
1187 aa
AA seq
DB search
MTTKYKEYAARFLAAKKERQLMDMEEKADMISLGKVSNASACERPSSAQNEEDSQKLITM
LRWSFDELIREVKSDPNVVHSTDSKGATLIHYAAKEGRTDAIEFLIDNGGIIDAKDNEDN
TPSHWAICYNHPKTLRILLDAGADVTILNHAKMAPIHLACDKNRPEMIEILASRKDFDPN
LIGDLGQAPIHFCATKDSEEAAKKILEYKPKLCICDNHGVFPVHCAATHASRKVLEVLLS
EGEKYGYTREVQFSFKDKENNTPLHAAVNGGCEIAIQVCLDSGAPPDVQQDDDSTPLHLA
CSQGALGMVKLLIKADKGLRTLSMRDVEQMTPLHKAAMFDHMHVVEFLLDMGAEMDAFDK
HCRTPLLLATSRGAWRTASFLIHRGASHTFKDDQSRNLMHLMVLSGGNINILGVEISEKG
GIIHLINDTDNHGCTPMHYATRDGNIKSLQGLLELGATVKLKNKDKQSPLHFAARYGRFN
SCKRLLDSSIGPNIINDTDGKGMTALHIAAWNGHSKVIQLLMLRGALLHRDHEGRTPLHL
AAMAGYVDTMKALLGTHSHLLDQVTCKGESALHVAARKGQAKSVKYLLTAGACFSTTHNG
QTVFDIVIEEKNQDVAMTLITHDRWHETLSNYSKMDQCPVALLIEHMPEVMMKVLDRCLT
ISEHDAMSVDFWVNYDFRYLEPTVCCRKEIKQCAGFDIPPLPALNAMVRHNQVDLLSHPL
CIEYLNSKWCAYGGPIHYGYILIYLLFVGFFTYFIATLDPTPIMVDDGTVSHNINGTTNY
QQVHSVGQHIALTYIMIYACLNIIKEFFQMFSQGIIYFTSIENYAEWCLYVSTLVFATPF
WFEVSNHYQWAAGSIAIFYAWFNFLMYQQRIDRIGIYIVMFYEILNTIVHVMLVFSVIII
AFGLSFYMLMSGEINHAFISPEISIFRVFSMMLGELDFINSFVMPLTDGNPATLHYTYLS
YILLVAVVILLPILLMNLLIGLAVGDIASVQRNARLKRLAMQVDLHSEFEPKLPWKILEW
VTKDNITLRPNAVCSRGTTLTCFDKVKEKYIVQTGGNKRFQSIIEMKNGEEKRCQGEFEK
LKKRMRGLSSKLDKQYDLMRLIVQKMEIHSEADEQDEGEAPPGEDGHRMRLRLNMSQVVT
AAMSTFNANRLHKRNMDADKGSAVLSLTPRTGSPTSDIASVTNVDVI
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaagtataaggagtacgcagcacgcttcctggcagcgaagaaagaacgtcag
cttatggatatggaggaaaaggccgatatgatatcactgggaaaggtttcgaatgcatcg
gcatgtgaacggccttcatcagcacagaatgaagaggactcacaaaaattgatcactatg
ctacggtggtcatttgacgagctcatacgtgaagtcaaatcggacccaaatgttgtccat
tccacggactcaaagggcgctacattaatacattatgcagccaaggaaggacgaacggat
gccatcgagttcctgatcgataatggcggaataattgacgccaaagacaatgaggataac
acaccatcacactgggccatttgttataaccacccgaaaacactccggatattattggat
gctggagcagatgtgaccatcctaaaccatgctaaaatggccccaatacatcttgcatgt
gataagaatcgacctgaaatgattgagatcttggcaagccgtaaagattttgacccaaac
ctaattggtgatctcggccaagcaccaattcacttctgtgcaaccaaagacagcgaagaa
gcagccaaaaagatattggagtacaaacctaaactctgcatatgcgacaaccacggtgtg
tttcctgtacattgtgccgccacgcacgcctccaggaaagtcttggaagtacttctctca
gaaggtgagaaatatggctatacacgcgaagttcaattcagtttcaaagacaaggagaat
aacacaccattacatgctgcagtgaatggtggctgtgaaatcgccatacaagtgtgtttg
gattcgggagcacctcctgatgttcagcaagatgacgattccactccgctccacctggcg
tgttcccagggagcgctgggcatggttaaacttctcattaaagccgataaaggattacgg
actctgagcatgcgtgatgtagaacaaatgacgccattgcataaagcggccatgtttgat
cacatgcacgtggtggagtttcttctcgatatgggagctgaaatggatgcctttgataaa
cattgccgtactcctcttttgcttgcaacatccagaggcgcctggaggacagcatcattc
ctcattcacagaggcgcttcgcacacttttaaagacgaccaaagccggaatcttatgcat
ctgatggtgctgagcggaggaaacatcaacatacttggagttgaaatatctgagaaagga
ggaattatccatctgataaatgataccgacaatcatggctgcacacccatgcattatgct
acccgagatgggaacatcaaatcattacaaggcttattggaattaggagcaacggtaaag
ctcaagaacaaagacaaacaatctccgctacattttgcagcgcgatatgggcgtttcaac
tcctgtaagcgtcttctggacagcagcatcggacccaatatcatcaatgacacagacggt
aaaggaatgacagcattgcacattgcagcgtggaatggccacagtaaagtcatacagtta
ctgatgttaagaggtgctctgttacacagggatcacgaagggagaacaccgttacactta
gctgcaatggctggctatgttgacaccatgaaagcattactgggtactcactcacatcta
ttggatcaggtgacctgcaaaggggaatctgctttgcacgtagccgcacgcaaagggcaa
gctaaatctgtcaaatacttgctcacggctggggcatgtttttccacgacccacaatgga
caaactgtgtttgatattgttattgaggaaaagaaccaagatgttgccatgacattaatt
acgcatgacaggtggcacgagacactcagcaattactctaagatggaccaatgccctgtt
gccctgctgattgagcacatgcctgaagtgatgatgaaagtgctggatagatgcttaacc
atatctgaacacgacgcgatgagtgttgatttctgggtcaactatgactttcggtacttg
gaacccacggtctgttgtcgtaaggaaataaaacaatgtgcaggatttgacataccacct
ctaccagctctaaacgctatggtacgtcataaccaagttgatcttttgagtcacccgctg
tgtattgagtatctgaacagcaaatggtgtgcatatggaggaccgatccattatggttat
atactgatctaccttctctttgtcggcttcttcacttatttcattgcaacactcgaccct
acaccaattatggtggatgatggcacagttagtcataacattaacgggacaactaattac
cagcaggtgcatagtgttggccagcacattgccctgacgtatattatgatatacgcatgt
cttaacatcatcaaagagtttttccagatgttcagccagggtattatatacttcacatca
attgaaaactacgccgagtggtgtttgtacgtttccacgttggtctttgcgacaccattt
tggttcgaggtatccaaccattaccaatgggcagccggatctatcgcaatattttacgct
tggtttaacttccttatgtaccaacaaagaatcgaccgaattggtatctacatcgtgatg
ttctacgagattctcaacaccattgtacatgtaatgcttgtgttttctgtaattatcatc
gcgttcgggttgtccttctacatgcttatgtctggagagataaaccacgccttcatatca
ccagagatctcaatatttcgtgtgttctcaatgatgttgggagaattggatttcatcaac
tcatttgtgatgcctcttactgatggcaaccctgcaactcttcactacacgtatctgtcg
tacattttattggtggctgttgttatcctgttgccaattctgctgatgaatttgctcatt
ggtttagctgttggtgatattgcatcagttcagcgaaacgcacgactcaaacggctcgcc
atgcaggttgatttacactcagaatttgaaccaaaactgccgtggaaaattcttgaatgg
gtcaccaaagacaatatcaccctacgaccaaatgctgtgtgctctagaggcaccactctt
acttgctttgacaaggtgaaggagaaatacatagtccaaacaggaggaaacaaacgattt
caatccattatcgaaatgaaaaacggtgaagaaaaaagatgtcaaggcgagttcgagaag
cttaagaaaagaatgagaggtttgtccagcaagttagacaaacaatacgacctaatgcga
cttattgtgcagaagatggaaattcactcagaggccgatgaacaggatgaaggggaagca
ccccctggagaagatggtcataggatgagattgagattgaacatgtcccaagttgtgact
gctgccatgtcgacatttaatgccaatcgactccataaaagaaacatggatgccgacaaa
ggatctgccgtactgagtttgacgccgcgaacaggttccccaacttcagatattgcgtca
gttactaatgttgatgtcatatag
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