Amphiura filiformis: 140138900
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Entry
140138900 CDS
T10871
Name
(RefSeq) coatomer subunit beta-like isoform X1
KO
K17301
coatomer subunit beta
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140138900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afil04147
]
140138900
Membrane trafficking [BR:
afil04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
140138900
Exosome [BR:
afil04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
140138900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
HEAT
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
140138900
NCBI-ProteinID:
XP_072016784
LinkDB
All DBs
Position
18:61721350..61751778
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AA seq
971 aa
AA seq
DB search
MTTASEQPCYTLINMSMDSEPPNEMQLKNDIENGDAKTKTTALKNLIYMILNGEKMPSLL
MPVIRFLLPMQDHTVKKLLLIFWEIVPKTHPDGKLLQEMILVCDAYRKDLQHPNEFIRGS
TLRFLCKLKEPELLEPLMPAIRACLEHRHSYVRRNAVMAIFTIFKNFDQLIPDAPELIHT
FLEGEQDASCKRNAFMMLIHVDQERALEYLSTCIDQINTFGDILQLVIVELVYKVCHVNP
SERARFIRCIYNLLQSSSPAVRYEAAGTLVTLSSAPTAIKAAASCYIELIIKESDNNVKL
IVLDRLIGLKEDPTHEKVLQDLVMDILRVLSASDLEVRRKTLDLAMDLVTSRNVGEMVLV
LKKEVTKTENAGEHEDTGKYRQLLVRTLHACSVKFPDMAAQVIPLLMEFLSDTNELAAMD
VLVFVREAIQRFEQLKPIIIEKLLEVFPTIKAVKIHRAALWILGEYCTTIDNIQSLMNEV
RSSLGEIPIVDDETRKAKGEVTEDDTMQGPSSQRLVTEMGTYATQSALSSAKPKKSEENR
PPLRGFLMEGDFFSGACLATVLTKLALRYVEITEDQKKRNAFLAEAMLIMATILHLGKSG
LATKNITDDDVDRIATCVKVLAERHSIMSEIFSNGCRSSLHAMLLAKQAEEKEVHKDLFE
KKVISVQADDPINFMQLLATADSGSTEDQLTLSLTLATMGTATKKEHTDISSSKLSKVTQ
LTGFSDPVYAEAYININQYDIVLDVLIVNQTSDTLQNCSLELATLGDLKLVEKPQPMTLA
PHDFCNIKANVKVASTENGIIFGNIVYDVSGAANDRSVVVLNDIHIDIMDYIIPASCTDA
EFRSMWAEFEWENKVTVNTNIHELHAYLKHILQATNMRCLTPEKALSGECGFMAANLYAR
SIFGEDALANVSVEKPASAAPDAPVTGHIRIRAKSQGMALSLGDKINVSQKKDTSGPKFE
THRLNISTTGV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagcatcggagcagccatgttataccctcatcaatatgtctatggactctgag
ccaccaaatgaaatgcaacttaaaaatgatattgaaaatggcgatgcaaagacaaagact
acagcactcaagaatctgatctacatgatcttaaatggagagaagatgcctagcctgctt
atgccggttatccgtttccttcttcctatgcaggatcacacagtgaagaaactgctgctt
attttctgggaaatagtgcccaagactcacccagatggcaagctcctgcaagagatgatt
cttgtgtgcgatgcatacagaaaggacttgcagcatcccaatgagttcatccgtggatcc
actcttagattcttgtgtaagctgaaggaacctgagctcctagagcctcttatgccagct
ataagggcatgcttggaacaccggcatagttacgtcagacgaaatgctgtcatggctatc
ttcaccatcttcaagaattttgaccagttgattccagatgcacctgagctcatccatact
ttcttagagggtgagcaagatgcgtcttgcaagcgtaatgccttcatgatgctcatacat
gtagatcaggagcgagcattggagtacttgagtacctgcatagatcagatcaacactttt
ggtgatattctacagctggtcatcgtagagctcgtctacaaggtatgtcatgtcaaccca
tctgagagggcacggttcatccgttgcatatacaatcttctgcaatcatccagtcctgct
gtgaggtatgaggctgctggcacactggtcacactatctagtgccccaacggctatcaag
gctgcagcatcctgctatatagaactaatcatcaaggaaagtgacaacaatgtcaaactt
attgtgctggatcgactcattggcctcaaagaggaccccacccatgagaaggtcctacag
gatcttgtcatggacatcctacgtgtcctgtccgcctctgacttggaagtgagacgcaag
acactggatttggctatggatttggttacatccagaaacgtaggagagatggttctagtg
ttgaagaaagaagtgaccaagaccgagaatgcaggggagcatgaagacaccggcaaatac
cgtcaacttctagtgcgtactctgcacgcttgcagtgtcaagttccctgatatggcagcg
caggttattcctctgctgatggaattcctgagtgataccaacgagttggctgccatggat
gtactggtgtttgtgcgtgaagccatccagagatttgagcaactgaaacccatcatcatt
gaaaagctcctggaagtattccctaccatcaaggcagtcaagatacaccgtgcagccctg
tggattctgggagagtactgcactactatcgacaacatacagagcttgatgaatgaggtg
cgctcctccctgggtgagatacctatcgttgatgatgagactcgtaaagctaaaggagag
gtcactgaagatgataccatgcagggcccaagcagtcagcgactagtaactgaaatgggt
acttacgcaacgcagagcgccctcagttcagccaagccaaagaaaagtgaagaaaacagg
cctccattacgtgggttcctgatggaaggtgatttcttctccggtgcctgcctggcgacg
gtgctcaccaagttggccctgcgatatgtagagatcacagaggaccagaagaagcgcaat
gcattccttgctgaggctatgcttattatggctactatcttgcatctgggcaagtctgga
cttgctactaagaatattaccgatgatgatgttgaccgtatagcgacctgtgtcaaagtg
ttagcagagcgacattccatcatgtcagagatcttcagcaatggatgccgtagttctctg
catgccatgctgttggctaaacaagctgaggaaaaagaagttcacaaggatttgtttgag
aagaaagtgatctcagtacaagcagacgatcccattaatttcatgcagctcttggctacg
gctgacagtggcagcactgaggatcaactgactttgagtttaaccttagccactatgggg
actgctaccaagaaagaacacactgacatcagttcctccaagcttagcaaggtaacccag
ttgacaggcttttctgacccagtgtacgcagaagcttacatcaacatcaaccagtatgac
atagtgctagatgtactcattgtcaatcagacatcggatacgctgcagaactgttctctt
gaactggctactttaggtgacttgaaacttgttgagaagccccaaccaatgacacttgct
ccacatgacttctgtaacatcaaggccaatgtcaaagtagcatctactgagaatggaatc
atctttggaaatatagtgtatgatgtgtctggtgcagccaatgatcgcagtgtagtagtc
ctaaatgacatccatattgacattatggattacatcatcccagctagctgtactgatgca
gagtttagatccatgtgggcagagtttgaatgggaaaataaggtgactgttaataccaat
atccatgagttacatgcctacctgaagcatatcttgcaagccactaatatgagatgtctt
accccagaaaaggctttgtctggtgagtgtgggttcatggcagccaatctgtatgccaga
tccatctttggtgaagacgcattggccaatgtgagcgttgagaagccagcgagtgcagcc
cctgatgcacctgtgacaggacacatacgtataagagccaagagtcagggtatggcactg
agtcttggagataagatcaacgttagtcagaagaaggacacttctggtccaaaatttgaa
acgcaccgtctcaacatcagtacaacaggtgtttga
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