Amphiura filiformis: 140139175
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Entry
140139175 CDS
T10871
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140139175
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140139175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
140139175
NCBI-ProteinID:
XP_072017056
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Position
18:complement(43381672..43403984)
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AA seq
984 aa
AA seq
DB search
MPERLPMFNSGGCTISIGVCLDAGAPPDVQQVGLNTVLHSAVSGGCTISIGVCLDAGAPP
DVQQVGLNTVLHSAVSGGCIISIGVCLDAGAPPDVQQGAELDAIDKNGRTPLLLSTSRGA
WRTASFLIQRGASHMNKDYQSRNLMHLVVLSGGNINIFGVEIAEKRGMHQLINETDDLGH
TPMHYATRDGNIKSLQGLLELGATVNLKNKQDKQSPLHFAARYGRFNSCKRLLDSIGPYI
INDTDGKGMTALHIAAWNGHSKVIQLLMLRGALLHRDHAGRTPLHLASMAGNIDCMRVLL
STHSYLLDQVDRQGESALHVAAHEGQAKAVGYLLTAGASLSLNHKEETVFDIVIDEKNDD
VAVAMIMHDRWHETLNNYSSNMGRCPIVMLTEHMPEIMMKVLDRCVTVSEHDPASADFWV
NYDFRYLEGPISTRIEFKKSTGMDMPPLPALNVSSYSLFQVNYDFRYLEGPISTRIEFKK
STGMDMPPLPALNAMVQHNQVDLLSHPLCIEYLNSKWSAYGGPIHYSYMTIFLLFVTLFT
YVIACVNPTPIMQEDGTVSHNGNGTSAETQFKYVGQHIALAYIVIYACLNIIKEFAQMFS
QGSAYFTSTQNYGECILYVCTLMFVLPFWVGVYSHYQWAAGSIAIFFAWFNLLMYQERID
RIGIFIVMFIEILKSILQVMVVFSVIIIAFGLSFYMLMSGEINHAFKTPVISIFRVFSMM
MGEIDFINSFVAPLTDNDPATLHYSYLSYIFLVAIVILLPILLMNLLIGLAVGDIEAVQR
NAKLKRLAMQVNLHSEYEPKLPAKILEYVTKDHITIRPNACSSGTSFRGIFDKIKRKYIQ
RTDGNLRIQTLLELKRNAESPGTMGKLKQRMKSLSSKLDKQHDLLRLIVQKMEINTEADE
QDEGEAPPGGDNQGIRMRLHMSSVVTAAVYSRRLHNKNKDAGMSVTPTTKSPMSNDAPHQ
ATARDILLGSFNSPVHSIPVPELP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcgcctcccgatgttcaacagtggaggctgcaccatatccataggagtgtgt
ctagatgccggagcacctcccgatgttcaacaggtaggacttaacacagtattacattct
gccgtgagtggaggctgcaccatatccataggagtgtgtctagatgccggagcacctccc
gatgttcaacaggtaggacttaacacagtattacattctgccgtgagtggaggctgcatc
atatccataggagtgtgtctagatgccggagcacctcccgatgttcaacagggtgcagaa
ttagatgccattgacaaaaacggtcgtacgcctcttctgttatcaacatcccggggagca
tggaggacagcatccttcctaatccaacgaggtgcatcacatatgaataaagattatcag
agccgtaaccttatgcatctcgtggtacttagtggaggaaacattaatatatttggagta
gagattgcagagaaaagaggaatgcatcagttaattaatgagacagatgatcttgggcac
acacccatgcattatgccactcgagatggaaacatcaaatcattacaaggattattggaa
ttaggagccacggtaaatctcaagaataagcaggacaagcagtcaccactgcattttgca
gcacgatatggccggttcaactcctgtaaacgtcttttggacagtataggaccttatatc
atcaacgacaccgacggtaaagggatgacagcactgcatattgcagcatggaatggtcat
agtaaagtcatacaattactcatgttaagaggggctttattacacagagatcatgcggga
aggacaccgctacatttagcttctatggctggtaatattgactgcatgagagttctactt
agtacacattcctatctactagatcaggttgacaggcaaggggaatccgccttacatgta
gctgcacatgagggacaagcaaaagccgttggatacttgcttacagctggggcaagtttg
tccttgaatcacaaagaagaaactgtctttgacattgtgatcgatgaaaaaaatgatgac
gttgcagtggctatgataatgcacgataggtggcatgaaactctcaacaattattcgtcg
aacatgggaaggtgcccaatagtcatgctcacagaacacatgccagagattatgatgaaa
gtgttggataggtgtgtgacagtatctgagcatgatcctgctagtgctgacttctgggtc
aattatgattttcggtacttggaaggaccgatcagtacgcgcatagaattcaagaaatct
acaggaatggatatgccacccctacctgctctcaacgtaagttcctactccctattccag
gtcaattatgattttcggtacttggaaggaccgatcagtacgcgcatagaattcaagaaa
tctactggaatggatatgccacccctacctgctctcaacgctatggtacaacataatcaa
gttgatctgttgagtcatccattgtgcatcgagtacctcaacagcaaatggtctgcatat
ggaggaccaatccattatagttatatgacgatctttctactgttcgtcacattgttcaca
tatgtcatcgcatgtgtaaaccctacgcctattatgcaggaagacggtacggtcagccac
aatggcaatggaacatcagcagaaacccagtttaaatacgttggtcagcacatagctctg
gcatatattgtgatctacgcctgccttaacataatcaaagagttcgctcagatgttcagt
cagggttctgcatacttcacgtcaacccagaactatggcgaatgcatcttgtacgtttgc
acgttgatgtttgtactcccattttgggttggtgtctacagtcattaccagtgggcagct
ggatccatcgctatatttttcgcttggtttaatctccttatgtaccaagaaagaatcgat
cgaattgggatattcatagtgatgttcattgagatcctcaaaagtatactacaagttatg
gtggtgttttctgtcattattatcgcgtttgggttatcattctacatgctaatgtctgga
gagataaaccatgccttcaagactccagtgatctctatattccgtgtattttctatgatg
atgggagagattgacttcatcaactcattcgtagcaccactcaccgataatgacccggca
acacttcactactcctacctgtcctatatattcttggttgctatagttattttactgccg
attttgctgatgaatttgctgattggtttagcagttggcgacattgaagcagtccagcga
aacgctaaactcaaacggcttgccatgcaggttaatttgcactcggagtacgaaccaaag
cttcctgccaagatcctagaatatgtaaccaaagaccacatcaccatacggccaaatgct
tgctcttccggaacttcctttcgagggatctttgacaaaattaaaaggaaatacatacag
cgaaccgatggaaacctgcgaattcaaacgcttctcgaattgaaacgtaatgcagaaagt
ccaggaactatgggaaaactaaagcaaaggatgaaatccttgtccagcaaactagacaag
cagcatgacctactgcgactaattgtccagaagatggaaattaacactgaagcagacgag
caagatgaaggtgaagcgccccctggtggtgacaatcaaggcattagaatgagattacac
atgtcatctgtagttacagctgctgtgtacagcagaagactccacaataaaaacaaagat
gctgggatgagtgtcacacctacaacaaaatcgccaatgtcaaatgatgcaccacatcaa
gctacagcaagagacattctccttggcagcttcaattccccagtacattcaatccctgtc
cctgaacttccctga
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