Amphiura filiformis: 140139700
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Entry
140139700 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K14296
nuclear pore complex protein Nup153
Organism
afil Amphiura filiformis
Pathway
afil03013
Nucleocytoplasmic transport
afil03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140139700
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140139700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afil03019
]
140139700
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140139700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
140139700
NCBI-ProteinID:
XP_072017503
LinkDB
All DBs
Position
18
Genome browser
AA seq
1586 aa
AA seq
DB search
MASTGGGKIRSKRSKVTNKPYARRTSLLGRVTETVRDFITPSWLSNAWHGVPEEEEVDVA
PPGSTNEGSMLPGYPRKRWESRKSGILARVDLEEGAPEQAENPEDDNDGDEPDIIMEEQQ
QPSADVILEDQPSTSTGHRSHKTPFNRYAKPLSASTPNDDIQIIAEKKPSDRDDGASDTS
VSTSGCSSLIPNIDMADHRAKLSKYNLDRLTEMTRNPSDPRRFRSDSPRLRSGSPRLRSE
APLDTSLWSEMSSSGRSSPFGRRPSRPQQSAQSSRRPTFNSSYFCTPRGGSSFESTMTDS
PGRASPFSSPFYPGKTTFGGSSAQKPAKRPRTSPYEVHLPVKRHVRIRPSSRNEVDVTSQ
TAKRILETLEKMSTPLSDAKKIPLSPTSSPFSFTPGRSTRLRQTGVPHAPGVQERVRMPG
PPTTGIRIPQRARIADNRQPPLLPVTKREPKIEAKPQTVSRPPEDTSPRLTSSPPSAGFS
FKMTPSTSTTAPARTHESRLPSLGGESGKSGGKMRSSKREQHYKSPIKDEDDVLEVPDLP
DVPLPLANGKTLPTFQFGGPPPAASGSLFKGGASTTSQPIKPLMASTPSPFGTAGTGGSF
KFSSPIVKDDAKSSGDSAPAPKSFFKFSAPKQAGTPDATSTPSGFGGSQSKATPSFGASA
GPSKLSKKSPIKMQEEDPEEATGGFMVAKQLKTGSCLEVLGMFLYLSQIETLLINLHHHQ
GQLPATKPLSLAEQFKPAAGSWSCDQCMVSNEANTDKCVSCTAAKPGGSAAANAAPSRSK
PLFGHGSVGKSQLPASKTPVVNCGFGDKFKKPAGSWTCDACLVPNEGNVTKCVSCQTPKP
GAVNSSSAVAKAPPSSTPIGFGDKFKPEAGSWKCDTCMCSNKSTVSRCVACETPKPGSDQ
SLSAPPASVYKFGNSSTTPASGAFKFGAPTTANQSSGGSITSGEPLGGSITSGTVGFKFG
APSATVSSESKLNANAAPFKFGQSTDDSAKSSAAPTAGGFQFANPSSSSSGGFKMGGSLT
NDKDGGGAPPNADPFKSGAFNAPKTTKPVASFATATRTTTDSVASAAKETSAPSNPQFNF
GAAAPGTKTDSALSTNFSTGGSTTEQKTTFNFGGPKTDEKQSTAATTNPAFKFGGTATST
EQKDTTSNKPAFNFGGRILCAQRCYKVNIXWASQPSSQANAVSEQSGGKPLFNFKSNATN
TSFQFGSGGSGGSNAAAEQKPAQENKAAFNFTATTATTGDNKSSFNFGAGSKTAENKDAG
SSNSLTKPGTYVFGGNTSSSNPTSNTTPAASITPFKFGDTSAQNSGAFVFGGTPAASANS
QPTPASSSGGGFSFTASAPATTQQATPAFGASSTTTNSVFGGFGSNASSANPSPVFGNPA
PTTTSTAIPNFGTTASTPFGSQNQQQGAAAPAFGAANSGTPFGGSPAPTFGAGSAPAFGA
GSAAPAFGNNATTTPAFGNANATQQNAAFQPNATAAFQFGGNNTQSTQQNSSVFKFGASQ
NNNSAAQNSNSSVGNASQGFNFSAQQAPSFNFGASAASTPSASASPYQFNASGSNAASNP
FNPMPTSSSTHSGRKIKRAVRRNMRK
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacgggaggcggtaaaattcgatcaaagcgttcgaaagtgacaaataagcct
tacgcccgaagaacgtcattgctagggagagttacagaaacagtcagggactttatcacc
ccatcgtggttgtccaatgcatggcatggcgttccagaggaagaagaagttgatgttgcg
ccacctggaagcaccaatgagggcagtatgctgcctggctatcctcgcaaaaggtgggaa
tctcgcaagagtgggattcttgcaagggtcgatcttgaagagggcgcaccagaacaagca
gagaatcccgaggatgataatgatggtgacgagccggatatcatcatggaagaacaacag
caaccatcagctgacgtcatactggaagaccagccatctacaagtacggggcacagaagc
cacaagactccattcaaccgctatgccaaacctctcagtgcttcaacacccaacgatgac
atccagatcatagcagagaagaagccctctgatagagacgatggcgcttcagacacgtcg
gtttccacaagcggatgctcgtctcttatacccaacatagacatggctgaccacagggca
aaactttcaaagtataacttggatagattaacagaaatgacgagaaatccttccgatccc
cggcgcttcaggtcggactcccctcggctacggtcaggctcccctagactacggtcagaa
gcacctctggacacatctctgtggtcagagatgtcctcatctggtcggagttcacctttt
ggccggcggccatctagaccgcagcaatcggcgcagagtagtaggcggccaacgttcaac
tcaagttatttttgtacgccacgtgggggctcatcgtttgaaagtacaatgacagactcc
ccaggaagagcgtcaccattttcctccccattttaccccggcaaaaccacgtttggaggc
tcttcggcgcagaaacctgcaaaacggcccaggacttcaccatatgaggtccacttgccc
gtcaagaggcacgtgagaatacgtccgtccagtcgcaacgaggtggacgtcaccagccag
actgccaagagaattctagaaacactagagaagatgtccacgccactgtcggatgcaaag
aagataccgctatcgcctacgtcatcaccattttcatttactcctggcagatcaacaaga
ttacgacaaacaggtgtcccccatgctcccggggtacaagagagagtccggatgccaggg
cccccaaccacagggatacgtataccgcagagggcaagaatagcagacaacaggcaaccg
ccgcttcttccagtaaccaagagggaaccaaagattgaggcaaaaccacaaacagtaagc
agacctccggaggacacctcaccaaggctgacatcaagtcctccatctgcaggcttttca
ttcaaaatgacccccagtacatcgaccactgccccagccaggacccatgagagcagactc
ccctccctcgggggagagtccggcaaatctggaggcaaaatgaggagctcaaagagagaa
cagcattacaagagtcccatcaaggatgaagatgatgttcttgaggtaccagacctacca
gatgtgcccctccccctggccaacggtaagaccctacccaccttccagtttggtggcccg
cctccagcagcttcaggctcgctgtttaaaggaggagcatcaaccacatctcaaccaatt
aaacctctcatggcatccactccgtcgccatttggtaccgccgggacaggtggatcgttc
aaattctcatcgccaatcgtgaaggatgatgccaagtcgtctggagattcggcaccggcg
cctaagtcatttttcaaatttagcgctccaaagcaagctggcacaccggatgcaacaagc
actccatctggctttggaggctctcagtcaaaggcaactccatcctttggtgccagtgca
gggccttcaaagttgagtaagaaatcaccaatcaagatgcaggaggaggacccggaggag
gcaacaggtggtttcatggtggctaagcagttgaaaacaggcagctgtctagaggttttg
ggaatgttcttgtatctaagccaaatagagactctactgataaacctacatcatcatcag
ggtcaacttccggctacaaaaccactcagcctagccgagcaattcaagccagcagccggt
tcgtggtcatgcgatcagtgcatggtgtcaaacgaagccaacacggacaaatgtgtgagc
tgcacggcagctaaaccaggtggcagtgctgcagccaatgctgcgccgtcacgatccaag
cctttatttgggcacggtagtgtaggaaaatcgcaacttccagccagtaaaacacccgta
gtaaactgtggattcggggacaaattcaaaaagccggcaggctcatggacttgcgacgca
tgtttagtcccaaacgagggcaacgtaacaaagtgcgtctcttgtcagactccaaaaccg
ggtgctgtgaactctagtagtgcagtggccaaagcgcccccatcatcgacgccgattggt
ttcggtgataagtttaagccggaggcagggagctggaagtgtgatacctgtatgtgtagt
aataagagtacagtaagcagatgtgtggcctgtgaaacgcctaaaccaggaagtgatcag
tcacttagtgctccacctgcatccgtctataaatttggaaactcgtctaccactccagca
tcgggagcattcaaatttggagcacccaccacagcaaaccaaagtagtggtggaagcatc
acatctggagagcccttaggaggatctatcaccagcggaaccgttggcttcaaatttggt
gccccgtcagcgacggtgtcatctgagtcgaagctaaacgccaatgctgcgccattcaag
tttggacaatcgacagatgacagtgcaaagtcatctgcagcacctactgcaggtggattt
cagtttgctaatccatcgtcatcatcaagtggtggttttaagatgggtggctcgttgaca
aatgataaggacggcggcggtgcaccgcccaatgccgatccttttaaatcgggggccttt
aacgctcccaaaacaactaagcctgttgcaagttttgcaactgcaacgagaaccaccacg
gacagtgtagcaagtgcagccaaagaaacgtctgcaccaagtaacccacaatttaatttt
ggcgctgcggcgcctgggacaaaaacggacagtgccctttcaacaaattttagtactggt
ggtagtactacagaacagaaaaccacattcaatttcggaggaccaaagactgatgaaaaa
caatctacagcagctacaacgaatccggcgtttaaatttggtggcaccgccacatcaaca
gaacaaaaagacactacttccaacaagccggccttcaactttggcggcagaatcctctgc
gctcagcgatgctacaaagtcaatatttagtgggcgagccagccatctagtcaagctaac
gcagtgtcagaacaatctgggggcaagccgttgtttaatttcaagtcgaatgctactaat
actagttttcaatttggatctggtggcagtggtgggagcaatgcagctgccgagcagaag
ccagcccaggagaacaaagctgcttttaatttcaccgcgacgacagcaacaactggcgat
aacaaatcaagttttaactttggcgctgggtcaaagacggcagaaaacaaagatgcaggg
tcttcaaatagtctaaccaagcctggcacgtatgtgtttgggggtaacacatcaagcagt
aatccaactagcaataccacaccggctgctagtatcacaccgttcaaatttggagatacc
tctgcccaaaattctggcgcatttgtgtttggaggaacaccggcagcatcagcaaatagc
cagccgacaccagcatcgtccagcggcggaggtttttcattcactgcttcagcaccagct
acaactcaacaggctacacccgcatttggagcttccagcactaccaccaattcagtgttt
ggcggatttggatccaacgcctcctctgctaacccgtctcctgtatttggcaacccagct
cccaccaccacctctacggccatacctaattttggcaccacggcgagcacaccttttggg
tcgcagaaccaacagcagggcgcagcagcaccggcgttcggagcagctaattctggaaca
ccatttggtggttctcctgcaccaacgtttggggcaggatcggcgcctgcttttggagct
ggtagtgcagcaccagcctttgggaataatgccactacgacaccggcatttggaaatgca
aatgctacacaacagaatgcagctttccagccaaatgccacagcagccttccagtttggt
ggcaacaacacgcaatcaacacagcagaacagcagcgtcttcaaatttggggcctcccag
aataataacagcgctgctcaaaattccaattcatccgtagggaacgcttcgcagggcttc
aacttcagtgcacagcaagcaccgtcattcaattttggcgcatcggcagccagcacaccg
agtgcaagcgcatcaccttatcagttcaatgcctcagggagcaatgccgccagcaacccc
ttcaatccaatgcccacatccagctcaacacacagtggcagaaagatcaagagagctgtc
aggagaaatatgcgcaagtaa
DBGET
integrated database retrieval system
