Amphiura filiformis: 140139744
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Entry
140139744 CDS
T10871
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
afil Amphiura filiformis
Pathway
afil04148
Efferocytosis
Brite
Membrane trafficking [BR:
afil04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140139744
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
GAD-like
ERAP1_C
Motif
Other DBs
NCBI-GeneID:
140139744
NCBI-ProteinID:
XP_072017553
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Position
18:complement(2597805..2666357)
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AA seq
861 aa
AA seq
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MSVRAFELVPAIERLKLLGERSKTSIECIECCGKNLYIGTSDCFVYHYLLQEETQPNGKI
IYTSEKQSQKHLALKKPVQQLAAASALTRILVLCDNTLTLLNMFNLEPILSGAKIKGVTA
FCVNQNPSTSNPFSIEIAVATRKRLVQVYSVTEDKMVPMRDVTIPDMPVNLEMDGSCICV
AMTMQYILANKNTGQLTELFPYESEQSIPLVKRVGREEFLLSGPGALGMFVTSAGISQRP
PLRWSESVCGVSYMFPYIVALDDEFLTVHSVLDQQQKQTIPFQGGRILGDFEGKIFVASS
KEVYGLVPLPVDKQLYWLADKRVEEALTLAKNFRKVGTTKEQFTRMLLRIQQQSGFIELS
EFHYNEAGQLFRDGQLDVRELISLFPNLLPSTSNFTRSIPPLHQFADISQVYRGDVARLS
ECKKFLVQYLEQIRDTDLSLGNRAEIDTSLMKLYAESNPEALIELVSEENWCLLSDGIET
LDRHQKYHALGLLYRYHTDNDKALQLWARIVDGELKDDSFPGLDFVVDFLARLTDHELVW
RYVDWALQKDPEMGVRIFTDRSDEEPISERMRPDTIIDYLHAYPKAVIRYLEYLVFSKRL
EKEKYHTHLAVLYLDTVLQIVKDVSAPKSEVDLARSTLRHMLQESSVYRVPLILSKVKET
DMHAECAILYGKLEEHDKALRILVHKLQDYGAAENYCIINSKGRDRGYRRRLFQILLGVY
LDPMEGKKDSLVKPAMDLLNSEDADFDSARVMQILPETWSVGLLSQFLTNSVRNSIHTSR
MSKLEHSLSRGDNLKNKVVVMSEQRSPIYISEEKVCQACNRPFTDPVFVRYPNGVIAHTQ
CARNKAVCPVTGKLFSTTKGH
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcgagcttttgagctagtgccagctatagaaaggctgaaactgcttggtgaa
cggtcgaaaacatcaatcgaatgtattgaatgctgtggcaaaaacttatacattggcact
agtgactgttttgtgtatcattatcttctgcaagaagaaacacagcccaatggaaagatt
atatacaccagtgagaaacagtctcaaaaacatctggcattgaaaaaacctgtacagcag
cttgcagctgcctcggcattgacgcgtatcctggtcctctgtgacaatacacttacacta
ctcaacatgtttaacttagagccaattctcagtggagctaagattaaaggagttacagcc
ttctgtgtcaaccagaatccttctacaagtaatccatttagtattgagattgcagttgca
acaagaaaacgtctagtgcaagtatattctgtgactgaagacaagatggtgccaatgaga
gatgttactataccagatatgccagtcaacttggaaatggatggttcctgcatatgtgta
gccatgacaatgcaatatattctagccaataagaacaccggtcagttgacagagctgttt
ccatatgaatcggaacagtcgattccacttgtcaaaagggtaggacgggaagagtttctc
cttagcggtcctggtgctctaggtatgtttgtcacatcggcaggtatatcacagcgccct
ccactgaggtggtcagagagcgtgtgcggagtcagctacatgtttccttatatagtagcc
ctagatgatgaattcctcacagttcatagtgtattggaccaacaacaaaaacagaccatt
ccatttcaaggcgggaggatcctgggtgactttgaggggaagatatttgttgcatcgagt
aaagaggtgtatggattagtgccgctaccagttgataagcagctttactggctggctgat
aagagggtagaagaagcactcacattagccaagaacttcagaaaagtaggaacaaccaaa
gaacagtttacaaggatgctgctgcgtatccaacaacaatctggatttatagaattatca
gagtttcattacaacgaagctggccagctctttagagatggacaattagatgtcagggag
ctgatcagtttgtttcccaatctcttgccgtcaacgtcaaacttcacccgctccattcca
ccgcttcatcagtttgctgacatctcacaggtctaccgtggggacgtggcgcggctctcg
gagtgcaagaaattcttggtgcaatacttagaacagattagagatacagatttaagttta
ggtaacagagcggaaatagacacatcactcatgaagttgtatgctgaatccaatcctgaa
gctttaatagaactagtatcagaagagaactggtgcttattgagtgatggcatagagaca
ttggatagacatcagaaataccatgcattaggattgctgtatagatatcatacagacaac
gataaggctctacaactctgggctaggatagtggatggtgagctgaaggatgacagcttc
ccaggtcttgactttgtagttgacttccttgccaggttaacagaccacgagttggtgtgg
agatacgtagactgggccttacagaaagatcctgaaatgggtgtcagaattttcacggac
cgatcggatgaggaacctattagtgaacgtatgcgtccggataccatcatagactacctg
catgcctaccctaaagctgtcattaggtacctggaatatctagtgttcagcaagaggtta
gagaaagagaaatatcacacacatctggccgttttgtacctagacacagtgctacagata
gtgaaggatgtgagcgcccccaagagtgaggtggacttggcgcgatctacactacgtcac
atgctgcaagagtcgtcagtgtacagagtgcctttaatcttaagcaaagtgaaggagacg
gatatgcatgctgaatgtgcaatactttatggaaagcttgaagaacacgacaaagctcta
agaatcctggtacacaaactacaggactacggagcagctgagaattactgtatcatcaac
tcaaagggaagagacagaggctacaggaggaggttatttcagatcctcctgggtgtctac
ttagaccccatggaagggaagaaagattccttggttaagcctgccatggatttgctcaac
agtgaagatgcagactttgactcagcaagggttatgcagattttgcccgagacctggtca
gtaggtctactctcacagtttctaaccaactcagtacgcaacagtattcacactagtcgg
atgtctaaactagagcacagcctatctagaggtgataatctcaaaaacaaagtggtcgtg
atgtcagagcaacgatcccccatctacatctcagaagagaaggtttgtcaggcgtgcaat
agaccgttcacggatccagtcttcgtacgctaccccaacggcgtcatcgcccatacacag
tgtgcaaggaacaaagcggtttgccctgttacagggaaattgttcagtactactaaagga
cactaa
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