Amphiura filiformis: 140139822
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Entry
140139822 CDS
T10871
Name
(RefSeq) transcription factor Sox-11-A-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afil03000
]
140139822
Transcription factors [BR:
afil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
140139822
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
140139822
NCBI-ProteinID:
XP_072017660
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All DBs
Position
18:complement(9450102..9453505)
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AA seq
372 aa
AA seq
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MFDIMIPQQVPTGMTLLHHHQIPSPGSPGSVSSGSSEDLKQSTLDIAEDICQTNWKANNG
HVKRPMNAFMVWSQIERRKIMEQTPDMHNAEISKRLGRRWKMLNETQKGPFVEEAERLRL
LHMQEFPDYKYRPRKKAKPATKTETVSKSSKSSKKSSKKSHSSPRNNNNNNHSATNNNRN
PDRVPKLKLTIDKRFRESIKASKAVELGNSQLTPPAKVPASPTGSNPDSPLDTSLYEDFV
KPVQHTQMQQYNNITAVPQLQHHQLQQQQYQQVQQQQQNCLQQIIPADNSCTDLSTLCAT
IEDFAFPNGWPSFDINNLTSLGLADDLSPLDSCSSAGSHFEFPDYTTPEVSEMIEGDWLD
PLNLASFVSTCT
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatattatgataccacaacaggtaccaaccggtatgactcttcttcatcatcat
caaatccccagcccgggatcgcctggtagcgtaagcagtgggtccagtgaggatctgaaa
cagtcaactcttgatatcgctgaagatatctgccaaacgaactggaaagctaataatgga
catgtaaaaaggcccatgaatgctttcatggtgtggtctcagatcgagagaagaaaaatt
atggagcagactcctgacatgcacaatgcagaaatctctaagcgacttggtagacgctgg
aaaatgctgaatgaaacgcagaagggacccttcgttgaggaagcagaaagactgcgactt
cttcacatgcaagagtttcctgattacaagtacagaccacgcaagaaggccaagcctgcg
accaaaaccgaaaccgtgagtaaatcaagcaaatccagcaagaagagcagcaagaagagc
catagtagtccacgaaacaacaacaacaacaaccatagtgccacaaacaataacaggaat
cctgaccgtgttcccaagctgaaactcactattgacaagcgattcagggagagtatcaag
gcaagtaaagccgtagaactcggtaattctcagctcactccccctgccaaagtaccggcc
agtccaactggttccaatcctgactctccattagacactagtctttatgaagactttgta
aaaccagtacaacatacacaaatgcagcagtacaataacatcaccgcagtacctcaactt
caacatcatcaattacagcaacagcaatatcagcaggtgcaacaacaacagcagaactgt
ttacagcagattattccagccgataactcatgtacggacttgtccacgctatgtgcaaca
atcgaggactttgctttcccaaacggctggccaagttttgatatcaataatttaacaagt
ctaggacttgctgatgatctcagcccattggactcatgtagcagtgcagggtcacatttt
gaatttccggactatacaaccccagaagtgagtgaaatgatcgagggtgattggttagac
ccattgaatcttgcatcatttgtgtcaacgtgcacatga
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