Amphiura filiformis: 140140914
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Entry
140140914 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afil03400
]
140140914
Enzymes [BR:
afil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140140914
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
140140914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_16
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
140140914
NCBI-ProteinID:
XP_072018769
LinkDB
All DBs
Position
19:11268009..11388172
Genome browser
AA seq
2203 aa
AA seq
DB search
MSLPRLTGALRAFSNVTPQESATQYQKADLVSKKRQRVARQAKEGLTWVKLSQQVHKQSE
QHKSEVTNELRKVIHLAREIVGSDASVELVESTAVVLFEIFQGADKVGQKETAKLRAAIG
PFPATSVSKVFTVIQNTVKHIPAESLEQIFAQNGANHVEFGSSIHFSFEQRTLVSDEDID
SESGDENYSFNFEYDGSASAARDDAAIPEVGSVGGASQEWDLSWLRRQVQTHFGEAGTQQ
LGLSIEALCSKLINDLVSDKTNDELQNELFELLGFDCFEMIGELLANRIELVAAARHLEV
SHRVSENKKDRQAPRPAYGSQVTIQSEQEKELSKQIRREEKKLARKEGRNGFAETPSSSN
EFDPQYLRRQRELALLHASHQPLFTQRSTYTPRESYPFVFDSQAEAQQTSSFIGGTKMAL
PIGFDRKNSKLAEEVTIPPSQPAPAHIGKKLVPISELDEIGRLAFGGTKQLNRIQSVVYE
TAYHTNENLLICAPTGAGKTNIAMLTILHEIKQHIQQAVIKKDEFKVIYVAPMKALAAEM
VRNFGGRLAPLGISVKELTGDMQLTKAEIMRTQMLVTTPEKWDVVTRKSTGDVALTQLVK
LLIIDEVHLLHDDRGAVIESLVARTLRQVESSQNMIRIIGLSATLPNYLDVARFLNVNPY
KGLFFFDGRFRPVPLGQTFIGVKATNIMQQKHDMNAVCYEKVKDMVRKGHQVMVFVHARN
ATVQTSMVLRETAKNMGDSGIFTPSQSADYGQAQKQVAKSRNRQLRELFPDGFSIHHAGM
LRHDRNMVERLFAAGHVKVLCCTATLAWGVNLPAHAVVIKGTQIYDANKGAFKDLGILDV
MQIFGRAGRPQFDDFGEGTIITSHDKLSHYLSLMTRQNPIESQFTSRLEDNLNAEISLGT
VTNIDEGIKWLSYTYLYVRMYINPLCYGLNFKMVEKDPGLELFRKELIVNAARALDKAHM
IRFVEHSGDLNATDLGRTASNFYIKYATIETFNEVLKPLMTEAEVFSMVSTAEEFEQIKV
REDELVELEQHHHDSCEMEAKGGVENAHGKVNILLQTYISRGFIDSFSLVSDSAYVAQNA
GRIMRALFEVALRNGWPVMASRLLTLCKTVDKRLWGFENPLKQFPMISAEVFRKLQRCHL
TLNRIKDMTGRDVGQMIHHPKVGEQIKQYAHQLPDIDLDATIQPITRTVLRVRLTITPNF
RWNDKVHGTASESWWIWVEDPENNHIYHSEYFLLHKKQVFSKEPQSLVFTIPIFEPLPSQ
YYVKAVSDRWHGSETVVPISFQHLILPERHPPHTELLDLNPLPITALNYPSYELLYKYTH
FNPVQTQIFHTLYHTDHNVLLGAPTGSGKTVAAEIAMFRVFNQQPGSKVVYIAPLKALVR
ERIDDWKVRLEEKLNKRVVELTGDVMPDIRAIAKADVIVTTPEKWDGVSRSWQNRTYVKA
VSLLVIDEIHLLGDERGPVLEVIVSRTNFISSHTDRRVRVIGLSTALANARDLADWLGIK
QVGLFNFRPSVRPVPLEVHISGFPGKHYCPRMATMNKPTFQAIRNHSPNKPVLIFVSSRR
QTRLTALDLIAYLAAEIDPKQWLHMEERPMESVISGIRDNNLKLTLAFGIGMHHAGLHER
DRKTVEELFVNQKIQVLIATSTLAWGVNFPAHLVVIKGTEFYDGKTKRYVDFPITDVLQM
MGRAGRPQFDEEGKAVILVHDIKKHFYKKFLYEPFPVESNLLDVLPEHLNAEIVAGTIGS
KQDAMDYITWTYFFRRLVMNPSFYELEGTDHDSINRFLSHLVEKSLLELQNCYCIEIAED
DRVIEPLTLGRISSFYYLHHRTVKMFRESLNNDTTLPDLLTVLSDAHEYEDLPVRHNEDS
MNSDLAQKLPLEVNPHSLDSPHTKTHLLLQAHFSRETLPCSDYFTDTKSVLDQSIRILQA
MIDVSADQGWLVTALRSMQLVQMALQGRWIHDSALLILPHVEHQHLQLFRPPTRGRSKSA
APIQTLPELVDILGGKRHLLNKMVTPELTDRQADEIWSVIQRLPVIEVSLSIRGWWADAS
EEEDRPLHSTYIAGIPKDKDYVAVHADQEYVLQVKLNRLQRQHRPDTKAHAPRFPKSKSE
GWWLVLGDVDNKELLALKRVGYVQGRNVVQLAFYTPETTGRVIYAVYMMSDCYMGMDQQY
SICLDVQEANIEAQINTEIILDGTGSDLERELDEEEEFSLAKG
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaccaagactaacaggtgcattgagagccttctccaatgtaactcctcaggag
tcggcaactcaatatcagaaggccgaccttgtatcaaagaagcgtcagcgggttgcaagg
caggctaaagaagggttgacatgggtgaagcttagccaacaagttcacaaacagagtgag
caacacaagtcagaagttaccaatgagttgaggaaagtgatacatctagctagggaaata
gttggtagtgatgcttcagtagaattagtggagagcacagcagtcgtcctctttgagatc
ttccaaggcgccgataaagtaggccagaaagaaaccgccaaactccgggctgctataggc
ccatttcctgcaacttctgttagcaaagtgttcaccgttatacaaaacactgtcaaacac
atccccgcagagtcgttagagcaaatattcgctcagaatggcgctaatcatgttgaattt
ggaagcagtatccatttctcttttgaacaaagaacgctcgtatcagacgaagacatcgat
tcggaatcaggagacgagaactatagtttcaactttgagtacgatggatcagcttctgca
gcaagggatgatgcagcgattccagaggtgggatcggtaggcggagcgtcgcaggagtgg
gatttgagttggctacgaaggcaggttcagactcattttggggaagctggcacacaacag
ttaggattgagtatagaagcattgtgttcaaaactcatcaatgatttggtgtctgataag
actaatgatgaactgcaaaatgagctgtttgagctacttgggtttgattgctttgagatg
attggtgaactgttagcaaatagaattgagttggttgcagcggctcgacatcttgaagtg
tcgcacagagtttcagagaataagaaagatcggcaagctcctcgtccagcttatggttca
caggtcactatacagtcggaacaagaaaaggaactgagcaaacaaatacgtagagaagaa
aagaaactggcaaggaaagaaggtcgtaatgggttcgcagagacgccatcatctagcaat
gagtttgacccacagtacctgagaaggcaaagagagttggcccttctgcatgccagtcac
cagccattattcacacaacggtccacatacacaccaagagagtcgtacccgtttgtattt
gattctcaagcagaagctcaacagacatcatctttcattggaggaacaaagatggcccta
ccaattggatttgatcgtaagaacagtaagcttgcagaagaggttacgattccaccctca
caaccagcaccagcacatattggaaagaaattagtgcctatctcagaactggatgagatt
ggccgactagcatttggtggcaccaagcagttgaatcgcatccagtctgtcgtgtatgag
acagcctaccataccaatgagaacctgttaatctgtgcacctacaggagctggtaaaacc
aacattgctatgcttaccatcctacatgaaatcaaacaacatatccaacaagcggttatc
aagaaagatgaatttaaggtcatttatgtggcccctatgaaggccttggcggcagagatg
gtacgcaattttggaggtcgcctggcaccattagggatctcagtcaaggaattgacagga
gatatgcaactcactaaagctgaaattatgaggactcagatgctggtgacaactccagag
aaatgggatgtagtaacgaggaagagcaccggtgatgttgcattgactcagctggttaag
ttactcattatagatgaggtgcatctccttcatgatgacaggggagcagttattgagagc
ttggttgctaggactcttagacaagtggagtcttcccagaatatgatcaggattattggt
ctttctgcaactctccccaattacttggatgtagcacgcttcctgaacgtcaacccatac
aagggactattcttcttcgatggtagattccgtcctgtgcctctaggtcagactttcatc
ggcgtaaaggcaactaatatcatgcagcagaaacatgacatgaatgctgtgtgctatgag
aaagtgaaggatatggtcagaaaaggacatcaggtgatggtgtttgtacatgctaggaat
gctacagtacagacgtctatggtgctacgtgaaacagccaagaatatgggcgattctgga
atcttcacaccatcgcagagtgcagactacggacaagcccagaaacaggtcgcgaaatca
cgcaacagacagctgagggagctgttccctgatggattctccattcaccatgccggtatg
ctacgtcatgacaggaatatggtagagagattgtttgcagcaggacatgtcaaagtacta
tgctgtactgctacactggcgtggggtgtcaaccttcctgctcatgctgttgtcatcaag
ggcacccaaatttatgatgctaacaaaggtgccttcaaggaccttggcattctggatgtg
atgcagatctttggtcgtgcgggacgccctcagtttgacgactttggagaagggacaatc
atcactagtcatgataagctgtctcattatctgtccctgatgactagacaaaatcctata
gagagtcagttcaccagcagattagaagataatctcaatgctgagatttcattagggacg
gtaaccaatatagatgagggaatcaagtggctgagttacacctacctgtatgtgagaatg
tacatcaacccgctgtgctatggtctcaacttcaagatggtggagaaagatccaggtttg
gagcttttccgtaaagaactcatcgtcaacgcagctcgggctctagacaaagctcacatg
ataagatttgtggaacacagcggcgatctcaacgctactgatcttggccgtactgccagt
aatttctacatcaagtatgccaccatagagacatttaatgaggtgttgaaaccgttgatg
acagaagctgaggtgttcagcatggtgtctacagcagaagaatttgagcaaattaaggtt
cgtgaggacgaattggtagaactggaacagcatcaccatgacagctgtgagatggaggct
aagggtggagttgaaaacgcccatgggaaagtcaacatcttgctgcagacgtacatatca
cgtgggtttattgatagcttctcactcgtctctgattctgcttatgtagcacagaatgca
ggtcgtatcatgagggcgctgtttgaagtagctcttcgcaacggctggccagttatggca
tcaagactactcacattgtgcaagacagttgacaagagattatggggatttgagaatcca
ctgaagcaattccctatgattagtgcagaggtgttcaggaaactacaaagatgtcatttg
acgcttaataggatcaaagatatgacaggcagagatgtgggtcaaatgattcatcaccct
aaagttggagaacaaatcaagcaatatgctcatcagctacctgatatagatctggatgcc
accatccagccaatcacacgtaccgtgctacgggtccgtctcaccatcacacctaacttc
agatggaatgacaaggttcatgggactgcgtcggagtcttggtggatctgggtggaggat
ccagagaataaccacatctatcattcagaatatttcttgctacacaaaaagcaggtattc
tccaaggagccacagagtcttgtgttcaccatcccaatctttgagccccttccatcacag
tactatgtaaaagcagtatcagataggtggcatggatcagagactgttgtacccatctct
ttccagcatctcattctacctgaaaggcatccaccacacacagagctccttgatttgaac
ccactaccaatcacagctctgaattatccatcctatgagttgctgtacaaatacacacac
ttcaatccagttcagactcaaatcttccacaccttgtaccacactgaccataatgtgtta
cttggagccccaacaggatctggcaagacagtggcagcagagattgctatgtttagggta
ttcaatcaacaaccaggaagtaaggttgtgtacattgctcctttgaaagctcttgtaaga
gagagaatagatgactggaaggtgagattggaggagaagctaaacaaacgtgtggttgag
ttgacaggtgatgttatgccagacatcagagctatagccaaagctgatgtaatagtgaca
acaccagagaaatgggatggtgtaagcagaagctggcagaataggacttatgtcaaagct
gtgtctctgttggtgattgatgaaatacatcttctgggtgatgagcgtggtccagtcctg
gaggtcattgtctcccgtacaaacttcatctcatcccatactgaccgccgtgtgagggtc
attgggctgtcaacagctctagccaatgcaagagatctagcagactggctgggaatcaaa
caggttggcctgttcaatttccgtccatcagtccgaccagtgcctctggaggttcacatc
agtgggttcccagggaagcactactgtccacgtatggccaccatgaacaaacctacattc
caagccatacgcaatcattcccccaacaaaccagtgctgatatttgtgtcgtcaaggaga
cagacccgtctgacagcgttagatttgatcgcctacctagcagccgagatagatcctaaa
cagtggcttcatatggaagaaagaccgatggagagtgttatatctggtatccgtgacaac
aacctcaagttgacccttgcctttggtattggtatgcatcatgcaggtctgcatgaaaga
gacaggaaaacagtggaagaattgtttgttaatcagaaaatacaagtgttaatagccaca
agtaccctggcatggggcgttaacttcccagcacatcttgttgtcatcaagggaaccgaa
ttctatgatgggaaaaccaaaagatatgtggacttcccaatcacagatgtgttacagatg
atgggcagagcagggcgccctcagtttgacgaggaaggcaaggcagtgattctagtccat
gatatcaagaagcatttctataagaagtttttgtatgaaccattcccagtggaatctaac
ctgttggatgtactcccagagcatttgaatgctgagatagtagctggtacaattgggtcc
aaacaggatgcaatggactatatcacatggacgtacttcttcaggagacttgttatgaat
ccaagtttctatgagttggaaggaacagatcatgacagtatcaacagatttctgtcgcat
cttgtagagaaatccctcttagaattgcagaactgctattgtatagaaattgctgaggat
gacagagttatcgagccgttaaccctgggtcgcatctcatccttctactacctgcaccat
agaacagtgaagatgtttagggaaagccttaataatgacacaaccttgccagatcttctt
acagtactatcagatgcacatgaatatgaagatttacctgtgagacataatgaggatagt
atgaacagtgaccttgcccagaagctccctctagaggtgaacccacattcgttggacagt
ccacatacaaagacgcacctactacttcaagctcacttcagcagagagactcttccgtgt
agcgactacttcaccgatactaagtcagttttggatcagtctatacgtatattacaggct
atgatagatgtctcagctgatcagggttggttggtcactgctctcagatccatgcagtta
gtacagatggcgttgcaaggacgttggatccatgattcagcgcttcttatattaccccat
gttgaacatcaacatctacagttattcagacctccaacaagagggaggagcaaatctgca
gcaccgatacaaactttgccagaacttgtggacattttaggtggaaaacggcatctgttg
aacaagatggtcacgccagaactgactgacagacaagctgatgaaatatggagcgtcata
cagcggttaccagtcatagaagttagcctaagtattcgtggttggtgggctgatgcaagt
gaggaagaagacaggccactacatagcacctatatagctggaattcccaaggataaagac
tatgttgcagttcatgcagaccaagaatatgtgcttcaagttaaactgaacagactacag
agacaacataggcctgacaccaaagctcatgctccacgtttcccaaagtctaaatctgag
ggttggtggcttgttctaggggatgtagataacaaggagttactagcactcaagagagtt
ggttatgtgcaaggaagaaatgtggttcagttggctttctataccccagaaactactgga
cgggtgatctatgcagtatacatgatgagcgactgctatatgggaatggaccaacagtac
agcatatgtctggatgtgcaagaggctaacatagaggcacagatcaatactgagattata
ctagatggtactgggtcagacttagagcgagaactggatgaagaggaagaattttctttg
gcaaaaggttga
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integrated database retrieval system
