Amphiura filiformis: 140141115
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Entry
140141115 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
afil Amphiura filiformis
Pathway
afil03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140141115
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
140141115
Chromatin remodeling factors
BAF complex
140141115
PBAF complex
140141115
GBAF(ncBAF) complex
140141115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140141115
NCBI-ProteinID:
XP_072019001
LinkDB
All DBs
Position
19:complement(26493061..26532962)
Genome browser
AA seq
1832 aa
AA seq
DB search
MADPNQMQDMMGNMGNGQPGGPMQQPGPVPSPMQGSPMPIPSPSSSLHGPSPGPMQGPMG
GPNMMSAPSPMSQGGMPTSSSGPMHPMPSHSPMQSNSPMPSHNPMPNQGPMGMGNQGYMS
NQAPMGSQGPMANQSAMSNQGPMGNQGPMQGHMGGQNNMGNQGQMQSGHMDGPGQMQHSQ
NMPNQMSGPMGNQGMMPNQGQMQASGHMPSQGPMGQAPMQNQNLNQMANQGMPNQGPMSN
QGPMPNQGPMGNQGPMMGNQGPTPMSNQGGMPNQGGMPNQGPGMGGQQGGPNYSGGGNPQ
YSMLQRALESMEEKGMQGDPRYAQLMNMANRYKNQGQQPQQGGYAGPMGPGNTQQQGGSR
PTPFNPGQLQQLKAQIMAYKMLSRSQPLPENLRLAIQGKLPSMYPRLPAGFSGSMGGSSG
SQMSNQWGQQQGPGGMGQAPNQQQPSPMGQRTMQLQKSPIMEGRPDQQMGGNQQQQQQQN
QQQQQQQQQQQPPXPPPPQEIIRPPDKSIPTVMMLQPKQNRVITIGKPQGLDPVTVLQER
ENRISARIAYRIEELQNLPGSLPDDLRTKATIEVRALRLLNFQRQLRNDVVACMRRDTTL
ETALNSNAYKRSKRQSLREARLTEKLEKQQKLEQEKKRRQKHQEYLNTVLQHSKDFKEYH
RNVQQKIGKLNKAIMTYHANTDREKKKENERIEKERMRRLMAEDEEGYRKLIDDKKDKRL
AYLLSQTDAYIASLTDLVRTHQQQLRIKKRGKKKKKPRELSDALKEGLTDENSQNSDMRI
KVIHTETGEMLTGEDAPMASQLETWLEMNPGYEVAPRGDGESGEEESGTEEEGEDEEYEE
EGEDSQDSQAASESEKVTQENSGKSVQEIIENMDRYHDDDHDETSSSLARPSEAKNTTGD
DEYTSRTKSINYYSMAHTKQEIVTDQPACMRNGTLKSYQLKGLEWLVSLYNNNLNGILAD
EMGLGKTIQSIALICHLIEKKRINGPYLIIVPLSTLSNWAMEFDKWAPSVIRVSYKGSPQ
VRRTMASSLRSMKFNVLLTTYEYVMKDKAILAKIRWKLMIVDEGHRMKNHHCKLTQILNT
HYIAPHRILLTGTPLQNKLPELWALLNFLLPTIFKSCNSFEQWFNAPFASTGEKVELNGE
ETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYVIKCDMSALQRLLYKHMQLKGVMLT
DGSENDKKGKGGTKALMNTIMQLRKICNHPFIFQHIEESFCEHIGGSGGIVQGPDLYRVA
GKFELLDRMLPKLKATGHRCLLFNQMTTLMTILEDYFIFKGYKYLRLDGTTKSEDRGGLL
TLFNAPDSDYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV
RVLRLMTVQSVEEKILAAAKHKLNVDSKVIQAGLFDQKSTGAERRNLLMTLLEKEEDQEE
EENDVPDDETINQMIARTEDEFEQYQRMDIERRREEARNPNRKPRLMEVDELPQWLVKDE
SEVERLTFEEEEEKLFGRGSRQRKDVNYGDSLTEKEWMKALEDGNIEEVEELKKLRKTRT
KRKHIDDDDDDEEEEEEDEPKPKPKKKRGRPPAAKPAPNPPKLTKHMTMLIDTMASYKDN
TGRPLAHPFLTLPPRKELPDYYELIRKPMDFKKLRDRVKQHRYRSLDDLEYDVMVMFSNA
QTYNLEGSQIYEDSIVLQSVFTNSRECLEQTGKLPDELEEEDSSSSSSSSDDDSKDGSSD
TESPSSSVKVKIKIKKDEQGAGKGKEAKEAKKPIKKGRPQRKAVVSDDDDNSDDEEKKKQ
SDSDSSDSDSNETADSSRASSRVASPAPGKKR
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccaaatcaaatgcaggacatgatgggcaacatgggcaatgggcaaccaggg
ggtccaatgcagcaacctggaccagtccctagtcctatgcaaggtagccccatgccaatc
cctagccccagttcatcattacatggacctagtccaggaccgatgcaaggaccgatgggt
ggcccaaacatgatgtcagcaccgagccctatgagccaaggaggaatgccgacatcaagt
tctggaccaatgcatccaatgccaagccacagcccaatgcagagtaacagccctatgccc
agtcataatcccatgcctaatcaaggaccaatgggaatgggcaatcaaggatacatgtcc
aatcaagcaccaatgggcagccaagggccaatggccaaccagagtgctatgtcaaaccaa
ggaccaatgggaaatcaaggacccatgcagggacacatgggtggacaaaataatatgggt
aaccaagggcagatgcaaagtggtcatatggatggaccgggtcaaatgcagcacagccaa
aacatgccaaaccagatgagtggtcctatgggaaatcaaggtatgatgcctaatcaagga
cagatgcaagcatcgggacacatgcccagccaaggaccaatgggacaggcaccgatgcag
aatcagaatctcaaccagatggcgaatcaaggaatgcccaatcaaggacctatgtcaaat
caaggacctatgcctaaccaggggcccatgggtaaccaaggccctatgatgggcaatcaa
ggacccacacccatgtctaatcaaggtggtatgcccaatcaaggtggtatgcctaaccaa
ggacctggaatgggaggccaacagggaggaccgaattattctggaggaggcaatccgcag
tacagcatgcttcaaagagctctggagtccatggaagaaaaaggcatgcaaggtgatcca
cgttatgcacaactgatgaacatggcaaaccggtacaagaatcaaggccagcagcctcaa
caaggaggttatgctggtccaatgggtcctggaaacacccaacaacaaggcggttcacga
ccaacccctttcaaccctggtcagctgcagcagttgaaagcccaaatcatggcatacaag
atgttgtctagaagtcaaccactacctgaaaacttgcgcttggccatccaaggaaagctt
ccgtctatgtatccaagattaccagcgggattttcaggatcaatgggtggttcaagtggc
tcgcaaatgtcaaatcaatggggtcagcaacagggtccaggaggcatgggtcaagctcct
aaccagcaacaaccaagcccaatgggtcaacgcaccatgcagctacagaaatcccccatc
atggaaggcagaccagatcagcagatgggtggcaatcagcagcagcaacagcagcagaac
cagcaacagcagcagcagcaacaacagcagcagccaccgncgccaccaccacctcaagag
attattcgtccacctgataagtcgattccaacagtgatgatgctacagccgaaacaaaac
agggttattacaattgggaaaccgcaggggttagacccagtgactgttctacaagaaaga
gaaaacagaatctcagcacgtatagcttaccgtatcgaagaactccagaatctaccaggc
tccctgccagatgacctgcgcacaaaagctactattgaagtgagggcactgaggttgctc
aacttccaaagacagcttcgtaatgatgttgttgcatgcatgcgtcgcgataccacacta
gaaacagccctgaattccaatgcgtacaaacgcagcaagagacagtctttgcgtgaggcc
agattgacagagaaactggagaaacaacagaagcttgagcaagagaagaagagaaggcaa
aaacaccaggaatatctgaacacagtgttgcaacattccaaggacttcaaagaataccac
cgcaatgtgcagcaaaagattggcaagctgaacaaggccatcatgacgtaccacgccaac
acggacagggaaaagaagaaggagaacgaacgtattgagaaagaacgtatgcgtcgcctc
atggctgaggatgaagaaggatatcgtaaacttattgatgacaagaaagacaagcgtctg
gcctatttactcagtcaaaccgatgcgtatattgccagtttgacagatcttgtccgcacc
catcagcagcaactcagaatcaagaagagggggaaaaagaagaagaagcccagagaactc
agtgatgcattgaaagaaggcctgacagatgaaaacagtcagaacagtgacatgaggatt
aaggtgattcatactgaaacgggtgagatgctgactggtgaagacgcccccatggctagc
cagctggaaacatggctcgagatgaacccaggatatgaggtcgctccacgtggggatggg
gaatctggagaggaagagagtggtacagaagaagagggagaagatgaagaatatgaggag
gaaggggaagactcacaagactcacaagctgcatcggaatcagagaaggtcacccaggag
aattctggcaaatcagttcaagagattattgaaaacatggatagataccatgacgatgat
catgatgaaacatcatctagcttggctcggccaagtgaggccaaaaatactactggtgat
gacgagtatacgagcaggactaagagcatcaattattacagcatggctcacaccaaacag
gagatcgtcactgaccagcctgcctgcatgcggaatggcacattaaaatcataccagctg
aaaggcttggagtggctggtgtccctttataacaacaacttgaatggtatcctagcagat
gagatgggtcttgggaaaactatccaaagtattgccctcatttgtcatctgattgagaag
aaacgaatcaacggcccgtacctaatcattgtacctttgtctaccctgtccaactgggct
atggaatttgacaagtgggctccatctgttatacgagttagctacaaaggatctccccaa
gtccgtcgtactatggcctcgagcctcagatccatgaaatttaacgttctactgacaacc
tatgagtatgtgatgaaggacaaagctatccttgccaagatccgttggaaattgatgata
gttgatgagggtcaccgtatgaagaatcaccattgcaagctgacccagattctgaacact
cattacattgcccctcacaggattctgctgactggcactcccctccagaataaattgccg
gagttgtgggctctgttgaatttcttgctaccgaccatcttcaagtcttgtaactcattt
gagcagtggttcaatgcaccattcgcatcaactggagagaaggtcgaactgaacggtgag
gagactctgcttatcattcgtcgtctgcataaagtgttgcgtccattcttattgcgtcgt
ctcaagaaggaggtggaatctcagctaccagataaggtggaatatgtgatcaaatgtgac
atgtcagccttgcaacgtctcttgtacaaacacatgcaactcaagggagtcatgttgact
gatggatctgaaaacgacaagaagggaaaaggtggaaccaaagctctgatgaacaccatc
atgcaactgaggaagatttgtaaccatcccttcatttttcaacacattgaggagtcattc
tgtgagcacattggcggctcaggtggcattgtgcaaggcccagatctctaccgtgtagct
ggcaagtttgaattgctggatcgtatgctgcctaaactgaaggcaaccggacacaggtgc
ttgctattcaaccagatgaccactcttatgaccatcttagaagattattttattttcaaa
ggttataaatatctacgcctggatggtacgaccaagtctgaagaccgtggcgggttactg
acgctcttcaatgctccggattcagattattttatcttcttactgagtactcgtgccgga
gggctgggtctgaacttgcaagcggcagacacagtcattatctttgacagtgattggaat
ccacatcaggatctacaagcccaagacagagctcatcgtatcggtcagaagaacgaagta
agagtcctgcgtcttatgactgtgcagagtgtagaagagaagatcttggctgcagctaaa
cataaactcaacgtagacagcaaggtcatccaggctggtctgtttgatcagaaatccact
ggagctgagagacgaaatctgctgatgactctgctggagaaagaagaagaccaggaagag
gaagaaaatgatgtaccagatgatgagaccatcaaccagatgatagctcgtacagaggat
gaatttgagcaataccagcgcatggatatcgaacgtcgacgtgaagaagctcgcaaccct
aatcgtaaaccacgtctcatggaagttgacgagctgccacagtggcttgtcaaggacgaa
agtgaagtggagcgcttgacgtttgaggaagaagaagagaagctgtttggtcgaggctca
agacagaggaaagatgttaactatggcgattctctcacagagaaagaatggatgaaggct
ttggaggacggtaacatcgaagaagtggaagagctgaagaaactccgcaagactcgcaca
aagaggaaacacattgacgatgatgatgacgatgaggaggaggaggaggaggatgaacca
aagcctaaacccaagaagaaacgaggtcgtccaccagcagctaagccggcacccaaccca
cccaagctaaccaaacacatgacaatgttgattgatactatggcctcatacaaagacaac
actggcagaccacttgcccatccattcttaacccttcccccaaggaaagaattacctgat
tattatgagttgatccgaaaacccatggacttcaagaagcttagagaccgggtgaagcag
cacaggtatcgctctttggacgatctggagtacgacgtcatggtgatgttctccaatgca
cagacgtacaacttggagggttcacagatctatgaagactccattgtattgcagtctgtg
ttcactaactcacgagaatgcctggagcagacaggcaagctgcctgatgaacttgaagaa
gaagattcctcctcgtcatcttctagcagcgatgatgattccaaggatggaagctctgat
acagagtctccctcatcctcagtgaaagtcaaaatcaagatcaaaaaagatgaacaagga
gcaggtaaaggcaaggaagccaaggaggccaagaagccgatcaagaaagggcgcccccaa
cgcaaagcagtagtcagtgatgatgacgacaactctgatgacgaggagaaaaagaaacaa
agcgattctgattcatcagatagcgacagcaacgagacagcagactcttcccgagcctca
tctcgtgtagcctcacctgcacctggaaagaaacgatag
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integrated database retrieval system
