Amphiura filiformis: 140141174
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Entry
140141174 CDS
T10871
Name
(RefSeq) cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
afil Amphiura filiformis
Pathway
afil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140141174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afil02000
]
140141174
Transporters [BR:
afil02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
140141174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_23
AAA_29
SMC_N
AAA_30
AAA_15
MMR_HSR1
ABC2_membrane
cobW
NB-ARC
Motif
Other DBs
NCBI-GeneID:
140141174
NCBI-ProteinID:
XP_072019069
LinkDB
All DBs
Position
19:30572825..30775581
Genome browser
AA seq
1752 aa
AA seq
DB search
MATLKKQIYYLIYRNILIKKRNKNQTFQEIFIPLIFCINLITIKYSIPNQTYDAIPSFPT
YSLDEGYYYPNSSVPLGFAPNTSENAAIMAAAAAKLNITASPSAIPFETEEDLLSAYLSE
DNPAPIQTGIIFSDDFPGNLSYKIRRPYGAAPGAGLKASSDQCRNINPAPGLAGYGCPAN
QYLYSGFLTIQVAMDHAIATVINSKMDLPYPTISFQMFPKGEYEVGVETVKLVSSLYYII
MFTPFIAILLSSLVGEKEKKIKECMKIMGLKETAFWVAWAVTYQVIIAVASIFIVALSYA
IGIFRKGNPFLIYLNFFFYGSSIVTISFMLTPFFNKGLTAGAAGSFFTLLISLAYIPLGL
IEGIAPAIQWAMCLFAPISMALAMDKAVSYELLYGGLTFQTFGLGDFPAYACLVMLIVDT
ILYLTLAIYFENVVPSEYGLRKPLLFFLKPSYWSPGKSVSDKTHLLSDTNGSVNTNDEGG
DVEAVHADVRQRDGIKIQNLEKIFPGSKRSGKPDVKAVDGISLDIYEGQITCLLGHNGAG
KSTLINLLTGLMNANSGSATVYGHNIRNPIEMDTIRTIMGVCSQQNTLFDFLSPTEHLKV
YAGLKGIPDEEIDGMVQKTLKDIDLDKQAATFAKDLSGGQQRKLCVGMAMIGNPKVLFLD
EPSSGMDPYSRRKLWSLLKKQREGRVTLFTTHFMDEADILGDRKAIMSKGTLRCCGSSLF
LKNRFGIGYHLGMVVEQNCAVDPITSLVQSHVADAGVDRAHGMELHYTLPLNDVSNFAGL
FEALENKDDTGVSSTAMALGIQSYGISMTTLEEVFLKIGEEAEEEDDATDGSKKEKKGGK
NKTNDQGFGTFVNDSSATSTPSTSIQDGAYNNSGITLEEVDEPQHTAAVQIEDATLDSTK
LATNPIVTTSGAQIKAMCRILFLINIRMPFLYINRIIFPSIYMILGVLLSTLISFGGSDQ
SNPVARTLEPSLYLATVDEIVTNQKTSLLYKDSLPADQNISELVSEFSSLDISSEPQSNL
SELFSVAPHSAALDVVNIGTGLQYTALYNDSTVHALPITLSVMSNAFYRLMDGLTPDQQI
TATNHPLPGTDIQVGFTSGFFFVIFFGMAVIGIPAGFAIFVIRERQIKVVSQLRVSGVEM
WRFWLAHFLIDMFQFALPFIVGIIIIAAFRMPSFTQPGAMFMFILFMLMYMPLTTMFHYC
VSFAFKDYETASGILPILILYACLFMLAPLLLMDLLVSTTVAGIIHLFICIVFPPYSVLG
ALYFIDKVYQQALVFNVVDKLTFGDYFTMDYFIFPTILVMIIPMIGYFFMLRYLEIRSKG
GDTRDTCPGGSARKPMRASKVNNDKIEGEDSDVIAERVKVQQIFEEDKNCSVAIDSLRRE
FVKRIESGGCCQKQTVEEKTKVAVRNLSFAVNQGEVMGLLGPNGAGKTTALNTVIAEHEP
TKGQIRVAGHDITSSLNEAFEAMGYCPQVDPLYPDVTLREHLEVYAAIKGIHASDIKNVT
EQYMEALYISEHADKRSQHLSGGTKRKLCFAMSMLGDPQVVLMDEPSTGMDPKSKRFLWN
TISASFQDKRGAILTTHSMEEADAVCSRVGIMVLGQLKCLGTTQHLKDKYGGGYVLEVKL
QLHGQGALEERIEALHNYVRSILHDAEVSENFGERITYKIPKKSVASLSTVFAAMEKGKD
TLGVEEYSFSQSTLEQVFIEFARIQEESDEIDEADKHMIGRTKRPEYDRSVSVRSLPRPQ
SELNGGASSEPC
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggccactttgaagaagcaaatttactacctgatttacaggaatatcctgataaaaaag
aggaataagaaccagacttttcaggaaatctttattccgttaattttttgcataaacttg
ataacgatcaagtactcgatccccaatcaaacatatgatgctattccatcttttccgaca
tattcacttgatgaaggatattactaccccaacagtagcgtgcctcttggattcgcaccc
aatacctcagagaatgcagccatcatggcagcggcagctgcgaagctcaacattacagct
agtccttcggcaattccatttgagacagaagaagacttattgtcagcatatctgagtgaa
gacaatccagcaccaatccaaaccggtataatattcagcgatgattttcccggtaacctg
tcctataagatacgtcggccatatggcgctgcaccgggtgcagggttgaaagcatcttca
gaccaatgtagaaatataaatcccgccccggggttagctgggtatggatgtccagccaat
caatatctctattcaggattcctgacgatccaagtggcgatggatcacgctatagcaacg
gttatcaacagcaagatggatctgccgtacccaacaatatccttccagatgtttccgaaa
ggggaatatgaagtaggcgtagaaaccgttaagctagtgtcctccctctactatatcatc
atgtttacgcctttcatcgcaattctgttgtcaagtctcgtaggagagaaggagaagaag
attaaggagtgtatgaagattatgggactgaaggaaaccgctttttgggtggcttgggct
gtgacctatcaggttattattgcagtggcatcaatattcatcgtagcactgagttacgcc
attggcatcttcagaaagggcaaccccttccttatttatctcaatttcttcttttacgga
tcatcaattgtaacaatatcattcatgttgacgccatttttcaacaagggcctcacggct
ggtgccgccggtagtttcttcacattgctgatatctcttgcttacataccactgggacta
atagagggaatcgcaccggccatacaatgggctatgtgtttattcgcacccatttctatg
gcacttgctatggataaggctgtgtcatatgagcttctctacggaggtctgacctttcaa
acctttggcctgggagattttccagcttatgcctgtcttgtcatgctgattgtcgataca
attctgtacctcaccctggctatctattttgagaatgttgttccaagcgagtacggccta
cgcaagccactgttgttcttcttgaagccttcctattggtcacctggtaaaagtgtttct
gacaagactcacttactctctgacacaaacggcagtgtaaacactaatgacgagggaggt
gatgtggaagctgtccatgctgatgtcagacaaagagatggaatcaaaatacaaaatcta
gagaagatatttccaggaagtaaacgttcaggaaaaccagatgtaaaagctgttgatgga
atatccttggacatctacgagggccagataacatgcctactgggtcacaacggcgctgga
aaatctacactcatcaacctcctaactggcctcatgaacgctaacagcggcagtgcgacc
gtctacgggcacaatatccgcaacccaatagagatggataccatcaggacgattatgggt
gtgtgctcacagcagaatacactttttgattttctgtcgccgacggaacatttgaaggtg
tatgcgggactcaaaggcatccctgacgaggagatagatggcatggttcaaaaaactttg
aaagatatagaccttgacaagcaggcagcaacatttgctaaagatctaagtggaggacaa
caacgtaaactatgtgttggcatggcgatgattggaaacccaaaggtgttgtttttggat
gagccaagcagtggaatggatccctattctagacgcaaattgtggtctttgttgaagaag
cagagagaaggcagagtgacgcttttcacgacacactttatggatgaggctgacattctt
ggagatcgcaaagccatcatgagcaaaggaacgttgagatgctgtggttcatccttgttt
ctgaagaacagatttggaattggctaccatttaggaatggtagtagagcagaactgtgca
gttgaccccatcacgtcacttgtgcagagtcatgtcgctgatgctggagtagacagagct
catggaatggagctgcattatacactaccactcaacgatgtcagcaactttgcaggtctc
tttgaagctcttgaaaataaagatgacaccggtgtcagctccaccgccatggcattgggt
atccaaagttacggcatttccatgacaactctagaagaagtgtttctaaaaattggtgaa
gaagcagaagaagaagatgatgctactgatggatcaaagaaggagaaaaaaggaggaaaa
aataaaactaatgatcaaggatttggcacttttgtcaatgattcttcagcaacttctact
ccttcaacttctatacaagatggtgcatacaacaattcaggaattaccttggaggaagtt
gatgaacctcagcatactgcagcagttcaaattgaggatgctaccctagactcgactaag
cttgcaaccaatcccatcgttactacatcaggggcacagattaaagcaatgtgcagaata
ttgttcttgattaatatccgcatgccttttctttacatcaatagaattattttcccaagc
atctacatgattcttggtgttctcttgtcaacactcatcagctttggtggctcagaccaa
agtaacccagttgccaggacccttgaacccagcctgtacttagccactgtagatgagatt
gtaactaaccaaaagacaagtcttctgtacaaggattcactacctgcagaccagaatatc
agtgaactggtatcagaattcagcagcctggacatcagttccgaaccacaaagtaacttg
agtgagctattctctgttgcacctcatagcgctgcactagatgtggtcaacatcggaaca
gggcttcaatacacagcattgtacaacgattccaccgtccacgcactgccaataacgctc
agcgtgatgagcaacgctttctatcgcctcatggatggtctgacaccggatcagcaaatc
accgcaaccaatcacccattgccgggtactgatatccaagtaggcttcacctcagggttc
ttctttgtgattttcttcggtatggcagtgatcggtatcccagcaggctttgccatattt
gtcatcagggagagacagattaaagttgtgtcacaattgcgtgtctccggagttgaaatg
tggaggttctggttggcgcattttctcatcgatatgttccagtttgccctcccgttcata
gtcggtatcatcatcatcgcggccttcaggatgccctctttcacccagccaggtgctatg
ttcatgttcatactcttcatgctgatgtatatgcctctgactacgatgtttcattactgc
gtatcgtttgcgttcaaagattacgagacggcgtcgggtattcttccaatcttgattctg
tatgcttgtttgttcatgctggctccactcttgctcatggatcttctggtgtcgacaact
gttgctggaatcattcacctgttcatctgcatagtatttccaccgtattcagtcttaggc
gcactttacttcattgataaagtatatcaacaagcactagtgtttaacgtggttgacaag
ctgacctttggagattattttaccatggattattttattttcccaacgatccttgtgatg
atcataccaatgattggttatttcttcatgctacgatatctggagatccgcagcaaaggg
ggtgataccagagacacatgccccggagggtcagcgaggaagccaatgagagcatccaaa
gtgaacaacgataaaatagagggtgaggattcagatgtgatagcagagagagtcaaagta
cagcagatctttgaagaggataagaattgttcagtggccatcgactctttacgtcgagaa
tttgtcaagcgaattgaaagcggtggatgttgtcagaaacagaccgtagaagagaaaacc
aaagttgccgttcgtaatctgtcgtttgctgtcaatcaaggtgaagtgatgggattgctc
ggaccaaacggtgcgggtaaaacaacagcgcttaatacggttatcgctgaacatgaacct
actaaaggacagatccgagtagctggacatgacatcacatcatcactgaatgaggcattt
gaagctatgggatactgtcctcaagtagaccccttatatccagacgtcaccttgagagaa
cacctagaggtgtatgcagcaatcaagggaatacatgcatcggatataaagaatgtcaca
gaacagtacatggaagcattatacatttcagaacatgctgacaagagatctcaacacttg
tctgggggaacaaagagaaagttatgttttgccatgagcatgctgggagatccacaggtg
gtacttatggatgaaccttctacagggatggaccccaagtcaaagagattcctgtggaac
actatatcagcaagttttcaagataagagaggtgctattctaacaactcattcaatggag
gaagctgatgccgtctgttccagagtgggaatcatggtgttgggacaactcaagtgcctt
ggaaccacacagcatctgaaagacaaatatggcggcggttacgtcctggaggttaaactc
cagctgcatgggcaaggtgcacttgaagaaagaattgaggccttacacaactacgtgagg
agtattttacatgacgcagaagtctctgagaattttggggagaggattacatacaaaata
cccaagaagtctgttgcttcattgtcaactgtgtttgcagcaatggagaaaggtaaagac
acactaggtgtagaagaatacagcttcagccagtcaacacttgagcaggtatttattgag
tttgcccggatacaagaagaaagtgatgagattgacgaagcagataagcacatgatagga
aggacaaaaagaccggagtatgataggtctgtcagtgtaaggagtttaccacgacctcag
agcgagctgaatgggggcgctagttctgaaccatgttaa
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integrated database retrieval system
