Amphiura filiformis: 140141690
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Entry
140141690 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140141690
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
140141690
TFIIIC, fungi type
140141690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_1
TPR_8
TPR_16
ANAPC3
TPR_6
TPR_12
TPR_11
TPR_17
TPR_7
TPR_9
HAT_PRP39_C
ARM_TT21
TPR_Slam
TPR_CcmH_CycH
TPR-S
ARM_TT21_C
TPR_15
HAT_PRP39_N
ARM_TT21_5th
DUF6584
Suf
PknG_TPR
ChAPs
SHNi-TPR
TFIIF_alpha
CDC45
TPR_10
Motif
Other DBs
NCBI-GeneID:
140141690
NCBI-ProteinID:
XP_072019702
LinkDB
All DBs
Position
19:2739281..2929245
Genome browser
AA seq
942 aa
AA seq
DB search
MALVLDKDELFRYLKGEISIQDWKQGQELLELFAGDDAKGQTFRISVGDDAALQPSTSSI
DVGVMQPAEGDEGEMDEDGEEEEEEDDDDEDYQVESTSTKKKKRVHFDKGAGPSSLADDD
DDYDDDDDDDDNPFRPPKHEKETWWKTWSKACRNLVPKPLRGLMGEAHLCFARGAHEEAI
AMCSEIIKQAPKCPDPFQLLGMIYEDKGEMEKSLQFSLIAAHLNPSDVEEWVKLAETCLE
QDNVKQALHCYTKALKYDPKNVSLLWEKANLYDQLKDHKKAMECYHTVLKVLPPEKAQES
LQLARDMVKTCHQSGDILTAVDILETTISKHPDMISSEDVNMLAELHMSNRQFVRALQVI
SDHCSITMRSASCPSYSMQQLSLDESSPRPDVDDVEVVMPDGIPIDLRVKLGVCLVHCKH
FRSAKVVLTLLFDESPDEMGDLYLDVAEAYVEGGQYSEAKPILASLVKTSNYNLPAVWLR
YADCLNNLGSLKDASDAYRKVLEQVPSHLDARLTLATVVKQLGNVDEALRVLSMEEESDS
EILGPHDINLLYQRCLLQHSHGYHMDFTKTAWVMMTQYLRMVKPSEDDPQAMYATTFTWL
SHGLHEDGMGHDDTRCIHLLYQRCMLQRSHGYHMDFTKTAWVMMTQYLRMVKPSEDDPQA
VVMSGNFSALNKDDWFNLFCKTCEALVATKQFDKAAQLCIRAMRANIKHPDRQPLTTEPV
KKEKMEFVAICCCFFSGQYTEAFNFIKGLLTRSDGNCAPGWNFFNLITNYTLDTRHHRFC
LRLTVRKFPESFALSVLNGHNAFVAGSFKHALGEYVRGYKMEPGNPLLNFCIGLCMLHIA
CQRFSLKKHSLIVQGFSFLKRYEDLRGDSQEVSYNLGRALHQLGLYHLAVHFYQKALDTP
PSIAGDARFDLQREVAYNLSLIYQHSGNEEMAAQLIYQHIVI
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgttttagataaggatgaactgtttcgatatctgaaaggagaaataagtatc
caagattggaaacaaggacaagagcttctggagctcttcgcaggtgatgatgccaagggc
caaaccttccgcatctctgtcggtgatgacgcagcactacaaccaagtaccagcagtatt
gatgtgggtgtgatgcaaccagcagaaggagatgaaggagaaatggatgaagatggagag
gaggaagaagaggaggatgatgatgatgaggattatcaagttgagtctacttctaccaaa
aagaaaaagagagtacattttgataaaggagcaggaccatcatcattggctgatgatgat
gatgactatgatgatgatgatgatgatgatgataatccatttcgtccaccaaaacatgaa
aaagaaacgtggtggaaaacgtggtccaaagcgtgccgcaatctggtgcccaaacctctg
cgtggcctgatgggagaggctcatctgtgctttgctagaggagctcatgaggaagctatt
gctatgtgtagtgagattattaagcaagcaccgaaatgtccggatcctttccagctgctg
gggatgatatatgaagacaaaggagagatggagaaatcattacagttttctttgattgct
gctcatctgaatccaagtgatgtagaggaatgggtgaagttagcagaaacctgcttggag
caagacaatgtcaaacaagcattgcactgctatacaaaagctctgaagtatgaccccaag
aatgtgagcttactgtgggaaaaagccaacctatacgaccaactgaaagatcataagaaa
gccatggaatgttaccacacagtactgaaagtattgccaccagagaaggcacaggaatca
ctacaactggctagagatatggtgaagacatgtcatcaaagcggcgatatcctaacagcc
gtagatattcttgagaccacaattagcaaacatccagatatgattagttctgaagatgta
aatatgctagcagaacttcacatgtccaatcgtcaatttgtgagagcattacaagtcatc
tcagaccactgtagtatcacaatgaggtctgcaagttgtccaagctattcaatgcagcag
ctcagtttagacgagtcaagccccaggcctgatgttgatgatgttgaagttgttatgcca
gatggaattcctattgatctgcgtgtcaaactgggagtgtgtcttgtacactgcaaacac
tttagatcagcaaaggttgtgttgacacttttatttgatgagagcccagatgaaatggga
gacctgtacttagatgttgcagaggcatatgtggaagggggacaatacagtgaagctaaa
ccaatccttgcatcacttgtcaaaacttccaattacaacctgcctgctgtgtggttgcgc
tatgcggattgtctcaataatcttggtagtctaaaagatgctagtgatgcttacagaaaa
gtactggagcaagtcccatctcacttagatgcaagactgactctagctaccgtagtaaaa
caactgggaaatgtggatgaagcactcagagttttgtccatggaggaagaaagtgacagc
gagatactaggccctcatgatatcaatctattataccagcgatgtttgctacaacattca
catggctatcacatggatttcaccaagaccgcatgggtcatgatgacacagtacttgaga
atggttaaacctagcgaagatgacccacaagcgatgtatgctacaacgttcacatggtta
tcacatggacttcacgaagacggcatgggtcatgatgacacacgatgtattcatctatta
taccagcgatgtatgctgcaacgttcacatggctatcacatggatttcaccaagaccgca
tgggtcatgatgacacagtacttgagaatggttaaacctagtgaagatgacccacaagca
gtagtaatgagtggcaacttttcagctctgaataaagatgactggttcaacttattttgc
aagacttgtgaagcgctagttgccaccaagcagtttgacaaagctgctcaattatgcatc
cgggcgatgagagcaaatattaaacacccagaccgacaaccgctgacaacagaaccagtg
aagaaagagaaaatggaatttgttgctatttgttgctgtttctttagtggacaatacacg
gaagcgttcaattttatcaaaggcctcctcacaaggagtgatggtaactgtgcacctggc
tggaatttctttaacctgatcaccaactatactcttgacacaaggcatcacagattctgt
cttagactcaccgtcaggaaatttccagagtcctttgcattgagtgttctgaatggtcac
aatgcttttgttgccggtagttttaaacatgcattaggtgaatatgtgcgtggatataaa
atggagcctggcaaccctctactgaatttctgcattggattatgtatgctacatattgca
tgtcagaggttttcattgaagaaacattcactcatcgttcagggcttttcattcttgaaa
agatatgaagacctgagaggagatagtcaggaggtgtcatacaaccttggcagggcatta
caccaattaggattgtatcatctagccgttcatttttaccaaaaagctctggacacgcca
ccatcaatagcaggtgatgcacgctttgatttgcagagagaagttgcctataatctatca
cttatatatcagcatagtggcaatgaggaaatggccgcacagttaatatatcaacatatt
gtgatatga
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