Amphiura filiformis: 140141754
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Entry
140141754 CDS
T10871
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
afil Amphiura filiformis
Pathway
afil04140
Autophagy - animal
afil04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140141754
04148 Efferocytosis
140141754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140141754
Membrane trafficking [BR:
afil04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140141754
Hops complex
140141754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
140141754
NCBI-ProteinID:
XP_072019724
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Position
20:complement(42887241..42912528)
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AA seq
829 aa
AA seq
DB search
MAHLTGDWNPLGEVFYRKVELYAMDRSWHEIADLKKFKVYAAPYGGPLALIRDDSKLVQI
RGSSRPIIYIYSSAGKAISQIKWDSGTIVHLAWSSTEDLLCIQQDGNVLVYDIFGTFKRT
FNMGSEARDTKVLECKVFSSYSGTGLAVLTGGYRIFVVTNVEDPHSRKIAEVPGLDSPPS
SWCVICRDRLIQVLLAKEEQLYLVDYSDAHEQLLETNVRVNAYIEMAVSFDNKFLALFAD
TGLLWIGSSDLQKKFCEFDTKSQMRPKQLVWCGTGGVVGYWENLLIVIGPHRDWIKYNMD
TEAHLIPEADSLRIIDSHTHELLQRVPAVVEDIFKIGSMAPGAMLYEASREFQKKSQKAD
EYIRMIKDQLPIAVEQCIEAAGSEYEPATQRMLLRAASFGKCFLTSMNSEKFVNMCKVLR
VLNAVREYHVGMPLTYEQLKHLRLQVLIDRLVVRRQWGLAMKVSRYLKLPEAEGESRILG
HWACYKVFQKHIPDEQIAVDIKRKLGDTPGIPYSEIAKKALECGRTQLAVSLLEYEPRAA
EQVPLLMTMRDLRLALTKAIESGDTDLVHMVLQRMRENQPSGEFLMTIRNYPQAQSLFMQ
FCRENNPSLLADIHYQNDDFLEMGHCRVRESYLEISHQKRLDALLSAQENYTKARNDFAS
KATDEQVKLLGYQRRLEEQYQQHYSDLSLHDTMKRLISKDLGKLAEQLKKEFKVPDKRFW
WLKVEALAEAGDWPELEKFAKNKKSPIGYEPFVETCMKHGNTFEAKKYIGRVSPEHKVKM
LIRIGVLEEAADLAMQNKNEDELNLVLRHCSGNKMLHAKILNMKGQLRK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcccatttaacgggcgattggaaccccttaggggaggttttttataggaaagtagaa
ctttatgccatggacagaagttggcatgagatagctgaccttaagaagttcaaggtgtat
gcagcaccatatggaggtcccttagctctcattcgggatgacagtaaactggtgcagata
cgtggaagttctagaccaatcatctatatctactcatcagctgggaaggctatctctcaa
ataaaatgggatagtggcaccattgtccacttagcctggtccagtacagaggatctactt
tgtattcaacaagacggcaatgtcttagtctacgatatctttgggacattcaagaggaca
ttcaacatgggatcagaagcaagagataccaaggtgttggaatgcaaggtgttcagtagc
tattcagggacaggcttagcagtgctgacaggtggttatcgtatctttgttgtcaccaat
gtggaggacccacacagcaggaagattgctgaagtaccaggtcttgattctccaccgagt
agctggtgtgttatctgtcgtgatcgactcattcaagttctccttgccaaagaggaacaa
ttgtatctagtagactacagtgatgcccacgaacagctcttagagactaatgtgcgagtg
aatgcctacatagagatggctgtgtcatttgataacaaattcctggcactctttgctgac
actggcttgttgtggattggatcatcagatttacagaaaaagttttgtgagtttgacacc
aagagtcagatgcgccccaagcaattggtgtggtgcggaacaggtggtgtggtaggctat
tgggagaatctcttgattgtgattggaccacatagagattggatcaaatataatatggat
actgaagcacacctcataccagaggcagatagtctgagaattatagatagccacactcat
gagctgctacagagagtgccagctgtggtagaggacatcttcaaaatcggatccatggca
cctggtgcaatgctgtatgaagcttccagggaatttcagaaaaagagtcagaaggccgat
gaatacatccgtatgatcaaggaccaactgcctattgcagtggagcagtgtatagaagca
gcagggtctgaatatgaaccggcaactcaacgaatgctgctcagggcagcatcatttggc
aagtgtttcctgaccagcatgaattcagagaaatttgtcaacatgtgtaaagtattgaga
gtattgaatgcggtcagagaataccatgttggtatgccactcacatatgaacaattaaag
catctcagacttcaggtgcttatagataggttggtagtgcgtcgtcagtggggtctggcc
atgaaggtcagtcgctatctgaaattacctgaagctgagggagaaagtcgtatcctaggt
cactgggcttgctataaggtgtttcagaagcacataccagatgaacagatagcagtggac
atcaagaggaagcttggggacacaccaggaataccatactcagagattgctaagaaagct
ttggaatgtggaaggacacagttagcagtcagtttactggagtatgaaccaagagctgct
gagcaagtgccattattgatgaccatgcgagatttgaggctagctctgaccaaggcaata
gagagtggagatacagacttagttcacatggtgcttcaacgtatgcgtgagaaccagcca
tcaggagaattccttatgaccatcaggaactatcctcaagcccagagtttatttatgcag
ttttgccgagagaataatccatccttgcttgcagacatacactatcaaaatgatgacttc
cttgaaatgggccattgtagagtcagagagagctacttggaaataagtcatcagaagagg
ttggatgcattgctgagtgcacaagaaaactacacaaaagccaggaatgattttgcatcc
aaggccacagatgagcaggtcaaacttctaggataccagagacgtcttgaagagcaatac
cagcagcattattccgacttatccttgcatgatacaatgaaacgactcattagcaaagac
ctgggcaaattagctgaacaactcaagaaagaattcaaagtgccagataaaaggttctgg
tggttgaaggtagaagccctggccgaggcaggtgattggccagaactagagaaatttgcc
aagaacaagaagtcacctataggatatgagccatttgtagaaacctgtatgaaacatggc
aacacttttgaagccaagaagtatatcggcagagtgtcaccagaacacaaggtcaagatg
ctcatcagaataggggtacttgaggaagccgcagacttagcaatgcagaacaagaatgag
gatgaactcaacctggtgcttagacattgcagtggcaataaaatgctccatgcaaagata
ctcaacatgaaaggacaactaagaaagtga
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