Amphiura filiformis: 140141806
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Entry
140141806 CDS
T10871
Name
(RefSeq) intermembrane lipid transfer protein VPS13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
afil Amphiura filiformis
Brite
Membrane trafficking [BR:
afil04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
140141806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140141806
NCBI-ProteinID:
XP_072019770
LinkDB
All DBs
Position
20:complement(14820549..14992868)
Genome browser
AA seq
3289 aa
AA seq
DB search
MVFESLVVDLLNRFLGAYVDNLDPKQLKIGIWGGDVVLENLNVKEGALDELDLPVKIKLG
HLGKLTLKIPWKNLYGAPVVATLEGLHVLVTPNSDSKYNAEKDEKQKFEAKQRTLQRVED
AKKKEEEQGKEQAPKKDSFAEKLATNVIKNIQVKVSDIHIRYEDKTTNPGFPIAIGATLH
NLSLGTTDANWKECVLDESAKLIHKLLRLDDLAVYWNSNTQMYCPPGPIDDKETKVKIQN
LLIEGIATGEKRPKDYHYVVEPISSQAQLRINPKPGNDLTTPQAWLNLVVNSIGVALRQQ
QFRDVMLTLESFERMARNDPFRKYKPDCPAIGNAKKWWHYAYNCVLEETVRRRHKMWSWE
HIRKHRRMCKEYTEAYLKKLDTSKPGKDMIENLEKYEKQMSVFSITMCRQQAEMDFIRLG
LKRKKQKAEQGWFGGWFGGGKKAEEKKPGQLDELADQFASAMTQEEKSKLYSAIGYSEKA
ADPTFPKEYVGIDAHVCLRQTYVKLIDDSRAKPEILNLSLTDLIAGFKQRPAAEAIKLEL
KIDDFSVFGTAAGDKLPQMVESIKTEGQLESLLTLLFETNPLDGKADQRIRLNTNPLKIV
YDAVTVNQIAKFFEPPDNVHLDDLSAAAASSLVDITEQSSTGLQYMVDNKSVLDLKIDVK
ASYVIVPECGVNDGSGSVLVLDLGNFKMNTVTEERPTGRRLENEALDVLMDKAYDKFNLN
LQSCQVILATKDDDWQAARILDSSPLHLLQPLQLTIGLHKCMVEDPRLAKIKVLGELPDV
CLDISDYKINELVKLFTSIPFPEGKKQQEPQTTFGKDTQFLDNIPESALVRMAASEAESL
SEDVAPEKQLTDQPSKTGLDSDDEFHSADEGEAASSGKKKAALARQESKAESQRTDVELQ
FELKQIGLNVFQRVDGEDKALMSLRLQGLGAQIKKRPWDMMIEASLGSVSIEHKQYKALD
GKDLFLVRTPTYDEKAGRLLTFKILMAEPKNPEFHTTYGSTQQDININFTTLEVVAHAEA
ILNLTEFADNMVAAIGGDKAGEAEDEGFEDEGYLSEDDKKPVRRRKKKIQPRDTIDVKLT
ANLDVIALAICTQTASLTEIQVKGLEAGVIVQKHKTTVDARLQEITIVDPTPQALHPKIL
STLDKEVFKMRLEMFNGATAEDGYSDMNAVDMRVGLGIGGIRAVFLNKFVMDLLAFVDLF
SRAKAKVAEASADAAASMQKTVGDMSERADRIALDVSIKAPIIVVPKSSTSDKALVADLG
LLRVQNSFSIAEGTAGQETPAILDTMKITLEKLQLCRAIIENEKTKCEVNILQPMSLRIG
VCRNLAAAWYHKVPAVDVSGKLEAIKLFIGPDDFGVMMGVLSENLPEGEEERKAAAVAQA
AQDAAIAAPTQPQKTQTKTDKQQETPAAEAASTPGGEVWLNMKLNFAFDGITASLYGAKL
DLRPLSGKVERPLSDPLGEFMISELKAGVEMNSDNSMKATAILGTVQLDDIRPTNRPGQM
TRMLGLRPVEGQQEDDDRKMVSVSFEQKANMDKNVDAVINNIQALICVEFLMTIADIFTK
GMAESAEKKAEKEEALVAAQSRAATPAASQQSQQAAPPQGTMTISATLEQPEIVLIADVS
KDDTNALFLKLAGKVDMIIAEDTMSIKGGLNGLRIDACPYNPSKRKGKYLKVLLPCNIDF
ILNAPKGQGQHISVTIPEIMLNISPETIKILSAASQSLTPPQAESKGTKAVVPADTWDAK
KLSDCKLWFLQQEAETDVDALLEEVVGGTDVEAPRGEELIASIGSIVIKLEAVIGQRTVP
TLALEASMEAHVKDWSSQLNVKSNLKVEVSCYNDKAGSWEPLLEPVECESGYKPYDLCVE
VVKNDLMALENSTTVSNKDEEEEGVNLAPPVMTITVSSDDNLELTITKTCLVMLGKLGEV
FGAAMANPDTKLQDSEEIPACKITNKLGLPLVIIPGSYYESSRENGGKISMKYDDVVKLD
VSQSVKSTIKMKSFLKGAAGEGGKDISLKIDGYEEIKKIPIVRAGNVMYNLTPTKKTASE
IVFSVVLEISANMDTRNIVIRSPLQFHNHFDTSMEVYMRVSNLTEKVGTVGPHTTYQVPL
KTAYTAELLVKPSLKSVMSPDKSQSTKGTEEEESHQLCDQTILWSKLWELRKQKKRNVTF
QCPAKTAGYTPYFFNIVTEMDELRYVKGSSINAPKYTFHIHPVVVLRNLLPIPVKYTLQG
TGEEITVESTAETLMSNVEMGKTMMFMTVPNYLDEEWKGEMTLRNTLKEFFQWGFRGGTA
DNAKMFEVGVWANYRSGFLEMALFAPYWLINKTGLPLSYKSGEDVIAHAAETEEPTLFSY
PSKLFSPGKNKIQLQVCESEWSEKFSLDTVGSYGFIACKTKDQNLEVGVHIQLSNFGMTK
MVIFTPRYVCVNQTDYDISCSEPMGRWYDIPKGECIPFWPVDKKQDQMMVVMEKDSGSAT
SKGFLFTDPHTTVLKLESEMGGAIVEVHVAETGNIIVFKSFQKDNFTIQLVNDLTDQAVH
FHQVGITDQHLLGPKHAMLYTWQDPTKERTLTFNIEGKDYKNALIKDGIGEVKLKNNDII
YWVSFLDGTQRKLLFTQDLATATKAQQASELEQPDQEIILSLPGLGLSLVNNINRSEVAY
IGIRSSGIIWQNKVRKRWKDLSGREVHSLEEAWQKAQKESQINKDAPPKIHKVDNMEVDF
ANMSMLKPKHRGLRRTYHPGIWAQMRKSPHQLQFHTKVNRLQIDNQMPAPVFPTILAPVP
LPKSVAAESAAKPVIEFCLMMSFSDYSSVIKVKYMRLLVQEMHAKVDIGFLNNLMQVFAS
DQSLEGKEREYMDLDLAVVTIPLKEAESIKAALAREAVNYYDEFHLSPLKIHVSFSLSDI
GDESEADGAETQVAKKASAGQNTLRFFLQSVGVTLTNVDDVLFKLGYFERKAQFYNQPQL
VMEIAKHYTNQGIKQLYVLVLGLDVIGNPFGFVRGVSTGVKDFFYEPYQGIVQGPEEFAE
GIALGMRSLFGHAVGGAAGAVSRITGTLGKGLAALTMDEEYKRKRQQAINQRPATFQEGL
ARGGKGLVMGFVEGASGIVTNPFQGAKKEGAKGFFKGVGRGLIGVVAKPTAGVVDFASGT
LEGIRRVTDVGDEVGKLRNPRVLYPDGIVRPYKRDDAAGLALLHQVEKGKYAANEDYVAH
VVLTTDKKHALVVTTKRLMLATKGDLMGSWTVEFQYPFVDLKEPPKLTDRGIQIMLKEKE
AGKRGGSMKKGLGLFKGKPAAGKMIQVPDRGQAEDFLAKVHHAMAELDN
NT seq
9870 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgaatcattggtcgtagatttgctcaaccgatttctcggtgcctacgtcgat
aatttagatcccaagcagctgaaaattggaatttggggaggtgatgttgtgcttgaaaat
cttaatgtcaaagaaggagccttggatgaattggaccttcctgtgaagattaagttaggt
catctgggcaaactcaccctcaagattccatggaagaacctctatggtgctcctgtagta
gccactctcgaaggcctccatgtactggtcaccccaaattcagattccaaatataatgca
gagaaggatgagaagcagaagtttgaagccaagcaaaggacactgcagagggtggaggat
gctaagaagaaggaagaggaacaagggaaagaacaagctccaaagaaggattcctttgcc
gagaagttggccaccaatgtgatcaagaacatacaagtaaaagtcagcgatatccatatc
cgctatgaggataagaccaccaatcctggttttcccatcgctatcggtgctacacttcat
aacttgtcacttgggacaactgatgccaactggaaggaatgtgtgctagatgagtctgct
aaactcattcataagctgctacgactagatgatctagccgtttactggaattctaacacc
cagatgtactgccctcctggtcccattgatgacaaggagacaaaagtgaaaatacagaac
ctgctgatagaaggcattgccacgggtgagaagagacccaaggattatcactatgttgtg
gagcccatatcatctcaagctcagctgaggataaatcccaagcctggtaatgacttaacc
acgccacaagcatggttgaatcttgtcgtcaacagtattggtgtagcactcagacagcag
cagttccgtgatgtgatgctcacattggagtcgtttgaacgcatggcacgcaatgatccc
tttaggaaatacaagcctgactgccctgccataggcaatgccaaaaaatggtggcactat
gcatacaactgtgtccttgaggagactgtacggagacgtcacaagatgtggtcatgggaa
cacatcaggaaacatagacgtatgtgtaaagaatacacggaagcctatctcaagaaactg
gacactagcaaaccaggcaaggatatgattgaaaatctagagaaatatgagaagcagatg
agtgttttctccatcacaatgtgtcggcagcaagcagagatggactttatacggcttggt
ctgaagaggaagaagcagaaagcagaacaaggctggtttggtggatggtttggtggaggg
aagaaggcagaggagaagaaaccagggcaattagatgaacttgctgatcagtttgccagt
gcaatgactcaagaggagaaatccaagctgtactctgccatcggttacagtgaaaaagcc
gcagatcctacattcccaaaagagtatgttggcatagatgctcatgtgtgcctcagacag
acctatgtgaagcttatagatgacagcagagctaagccagagattctcaacttgagtcta
acagatctaatagctggattcaaacagaggcctgctgcagaagccataaagctggagctt
aagatagatgatttcagcgtgtttggtacggcagcaggagacaaacttccacagatggtg
gagtctatcaagactgaaggtcaactggaatctcttctaacactcctatttgaaacaaac
ccactagatggaaaagcagatcagaggatcagactcaacacaaatcctctcaaaattgtc
tatgatgcagtcacggttaatcaaattgccaaattctttgaaccaccagacaatgtccac
ctagatgatctatcagcagcagctgcatcatctctagttgacataacagaacagtcttcc
acaggtctacagtatatggtagacaacaagtctgtgttggatcttaagatagatgtcaag
gcatcgtatgttatcgtaccagagtgtggcgtcaacgatggaagtggcagtgttcttgtt
ttagacttgggtaatttcaagatgaacacagtgacagaggagagaccaactggacgcaga
cttgagaatgaagcattggatgttctcatggataaagcatatgataagttcaacttaaat
ctgcagagttgtcaagtcatcctagccacaaaagatgatgactggcaggcagctcgtata
cttgatagttcaccattacatctactacagccattacaacttactattggtctacacaaa
tgtatggtagaagatccaagactagccaaaatcaaagttttaggtgagcttcccgatgtt
tgcctggacatatccgactacaagatcaatgagcttgtgaagctgtttaccagcattcca
ttcccagagggtaaaaaacaacaggaaccacagacaacatttggcaaggacacacagttc
ctagacaacattccagaatcggcacttgtccgcatggctgcgagcgaggccgagtcctta
tccgaagacgttgctcctgagaagcagttgactgatcaacccagtaagacgggtctcgat
agcgatgacgagttccattcagcggacgaaggagaagcggcatcgtctggtaagaagaaa
gctgcattggctaggcaggagagcaaggcggaatcacagaggacggatgttgagctgcag
tttgaactgaaacagattggactgaatgtgttccagcgggttgatggcgaagacaaagct
ctcatgtcactcaggttacagggcttaggagcacaaatcaagaagcgaccatgggatatg
atgattgaggcatccctgggcagtgtgtccattgaacataaacaatataaagcattggat
ggaaaagacttgttcctggtccgtactccgacatatgatgagaaggctggacgactgctt
acattcaagattctcatggctgagcccaaaaatcccgagttccacactacctatggatcc
acgcaacaagatattaacatcaattttactaccctggaggttgtggcacatgcagaggcc
atcttgaatctgacagagtttgcagacaacatggtggccgctatcggaggcgataaggca
ggagaagctgaagatgaaggatttgaagatgaggggtacctcagtgaagatgataagaag
ccagtccgtagaagaaagaagaagattcaaccgagagacaccatagatgttaagcttact
gccaatttggacgtcattgcactggctatatgtacacagactgcaagtctcacagagata
caagtcaaaggtttggaagcgggtgtaatagtccagaaacacaagactacagtggatgct
cgtctccaagaaatcaccatcgttgacccaactccacaagctttgcatccaaagattttg
tccacacttgataaggaagtgttcaagatgagacttgagatgtttaatggtgctacagca
gaggacggctactctgatatgaatgcagttgatatgagagtcgggttgggtattggtggt
atacgcgctgtattcctcaataaatttgtcatggatctcctagcttttgttgatctcttc
tcacgtgctaaagccaaagtagctgaagccagtgccgacgcagcagcttccatgcagaag
actgtcggagacatgagtgaacgcgctgaccgcatagcactagatgtatccatcaaagct
ccaatcatagtggtgccaaagagctccacatcggacaaagccttggtggctgatttaggc
ttactcagggtacagaattcatttagcattgctgaaggtacagcaggacaggaaacccca
gctatattggacactatgaaaatcactctggaaaagctacagctttgtagagcaataata
gagaatgagaagacaaagtgcgaggtgaacatacttcaacccatgagtctgcgtattgga
gtgtgtcgtaatctggctgcagcgtggtatcacaaagtacctgctgttgatgtgtcagga
aaactggaggctatcaaactatttattggaccagatgactttggagtaatgatgggagta
ttgagtgagaacctaccagagggtgaggaagagaggaaagctgctgcagtcgctcaagct
gcacaagatgctgcaatagctgctccaacacagccacaaaagactcaaacaaaaacagac
aaacaacaagagaccccagcagcagaagcagccagcacaccaggtggtgaagtatggctc
aacatgaagctcaactttgcatttgatggtattactgcatcgctatatggggccaaattg
gacttgcgccctctgtcaggaaaagtagagcggccactgagcgacccacttggtgaattc
atgatctccgagctgaaagccggggtagaaatgaattctgacaattccatgaaggctact
gctattctaggaacagttcagcttgatgatatacggccaacaaatagacctggtcaaatg
acaagaatgcttggcttgagaccagtggaaggccagcaggaggatgatgacaggaaaatg
gtatcggtttcatttgaacaaaaagccaacatggacaaaaatgtggatgctgtcatcaac
aacatccaagcgctcatctgcgttgagtttctcatgaccatcgctgacatcttcaccaaa
gggatggctgagagcgctgaaaagaaagcggagaaagaagaagccctagtggctgcacaa
agcagagccgcaacgcctgcggcatctcaacaaagccagcaagcagcgcccccacaaggg
acgatgacaattagcgcaaccctggaacaaccagagattgtactgatagctgatgtttca
aaagacgacaccaatgcgttgttcttgaagttggccggtaaggtggacatgatcatagct
gaagatactatgtcaattaaaggtggactgaatggacttagaattgatgcatgcccatac
aatccatcaaagcgcaaaggaaaatatctcaaggtgttgctgccttgcaacatagacttc
attctaaatgcacccaaaggtcaaggtcaacatattagtgtcactattcctgagattatg
ctcaatatatcgccagaaactatcaagatattgtcagctgcaagtcagtctcttacacca
ccgcaggccgaatccaaaggaaccaaggcggttgtcccagcagacacttgggatgctaag
aaattgagtgactgcaaattgtggttcctgcaacaagaagctgaaactgatgttgatgca
cttttggaggaggtagtgggcggaacggatgttgaagcaccccgaggagaagaactgatc
gcatcaattggtagtatagtcatcaaattagaagcagtcattggacagaggactgtacct
acgttggctctggaagcaagcatggaagcacatgtcaaggattggtcttcacagcttaat
gttaaaagcaatctgaaagtggaggtgtcctgctacaatgacaaggctgggtcttgggaa
cctctcctggaaccagttgagtgtgagtctggatataagccatatgatctctgtgttgag
gtggtcaagaatgaccttatggctttggagaattccaccacagtgtcaaacaaagatgaa
gaagaggaaggcgttaacctcgctcctccggtcatgacgatcacagtgtcatctgatgat
aacttggagcttacaattactaagacatgtctggtgatgctgggtaaactaggagaggtg
tttggtgctgccatggcaaatcctgatacaaagttacaagattcagaagagattcctgcc
tgtaaaatcaccaacaaacttggactaccattggttattataccaggcagctattatgag
tcatccagggaaaatggtggcaagataagcatgaagtacgatgacgtagtcaagctggac
gtatcgcaatcggtcaagtccaccatcaagatgaagtccttcctgaagggtgctgctgga
gaaggagggaaagacatctcattgaagattgatggttacgaggagatcaagaagatcccc
attgtaagagctggtaatgtgatgtacaacctgacaccaaccaagaagactgcatcggag
attgtcttctcagtcgtcctagaaatttcagccaacatggacacaaggaacattgtcatc
aggtcacctctacagttccacaaccactttgatacatccatggaggtctatatgagggtt
tccaacttgacagagaaggtcggtaccgtaggtcctcacaccacataccaggtgccactt
aagactgcctacacagctgaactgctggtcaaaccatcactgaagagtgtgatgtcaccg
gataagtcccaatcaacgaaggggacagaggaagaagaaagccatcagttatgtgatcag
accatcttatggagtaagctttgggagctgaggaaacagaagaagagaaatgtgacattc
caatgtccagctaagactgcgggatacacaccatatttcttcaatatcgtaaccgagatg
gacgagttgcggtatgtgaaaggctcatccatcaatgcacccaagtacaccttccacata
catccagtagtagtactacgcaatctgctgcccataccagtcaagtacacattgcaaggt
acaggggaagagattacggtggagtctactgctgagacattgatgtctaatgtggagatg
ggcaagaccatgatgtttatgacggttccaaactaccttgatgaagaatggaaaggtgag
atgaccctgaggaacaccctgaaggagttcttccagtggggtttccgcggtggtacggct
gacaatgctaagatgtttgaggtcggtgtatgggctaactacagatctggcttcttggag
atggcgttgtttgctccctactggcttatcaataagactggcttgccattgtcttacaag
agtggagaagatgtgattgcccatgcagcagagacagaggagccaacactgttttcttat
cccagtaaattgttttcaccgggaaagaacaagatccaactgcaagtctgtgagtctgaa
tggtcagagaaattctctctagatacagtaggaagttatggtttcattgcttgcaaaacc
aaagaccagaatctggaggttggagttcatattcaactgagcaactttggcatgaccaag
atggtgattttcactccgcgttatgtatgtgtgaaccaaactgactatgatatctcatgt
tctgagcctatgggcaggtggtatgatatacctaaaggagagtgcattccattttggcca
gtggacaagaaacaagaccagatgatggttgtgatggagaaagatagtggcagtgcaaca
tccaaaggattcttatttactgatccccatacaacagtactcaagctagaatcggagatg
ggaggagcgatagttgaggttcatgtagcagagactgggaacatcatagtgttcaaatcg
tttcaaaaggataactttaccatccagctggtcaatgacctcactgatcaagcagtacac
tttcaccaagttggcatcactgaccagcatttgttgggcccgaagcatgctatgctgtac
acgtggcaagatccaaccaaagagaggacactgacatttaatatagaaggcaaagattac
aagaatgctctcatcaaggatggtattggtgaggtgaagttgaagaacaatgatattata
tactgggtgtctttcttagatggtacgcagaggaagcttctgtttacacaagacttagct
acagctactaaagcacagcaggcatctgagctggagcaacctgatcaagaaatcatctta
tcattaccagggttaggtctatcgttagtcaacaacatcaacagatcagaagtggcttat
attggaatcagaagctctggcatcatctggcagaacaaagtacgcaagaggtggaaggat
ttgagtggacgagaggtgcattcattggaagaagcttggcagaaagcacagaaagaaagc
caaataaacaaagatgcaccgccaaagatacacaaagtcgacaatatggaggttgatttt
gccaacatgagtatgttgaaacccaagcatagaggcctacgtcgtacatatcacccaggc
atatgggcacagatgagaaagtctccccatcagttgcaattccacaccaaggtgaatagg
ctacagattgacaaccagatgcctgcacctgtgttccctaccatattggcacctgtgcct
ctgcctaagagtgtggcagctgaaagtgctgccaagccagtgatagaattctgcttgatg
atgagcttctcagattacagcagtgtgattaaggtgaaatatatgaggctgctagtacaa
gagatgcatgccaaagttgacataggattcctcaataatctcatgcaagtatttgcatca
gatcagagtctagaaggaaaagagagggagtatatggatttggatttagctgtagtgaca
ataccactgaaagaagcagaatctatcaaggcagcactggccagggaggctgtcaattac
tacgatgaattccacctgtccccactaaagatccatgtcagcttctccttgtcagacatt
ggggacgaatcagaagccgatggagcggagactcaagtagctaagaaagccagcgctgga
caaaacacactcaggttctttttacagagtgtgggtgtcacgcttactaatgtagatgat
gtgctcttcaaacttgggtactttgaacgtaaagctcagttctacaatcagccccagttg
gtgatggagatagctaagcactacaccaatcaaggcatcaagcagctctatgtactcgtc
ttgggtcttgatgtcattggcaacccgtttggattcgtcaggggagtgtccacaggtgtc
aaagatttcttctatgaaccataccaaggtattgtgcaaggaccagaagaatttgcagaa
ggtatagccttgggaatgaggagtctctttggacatgctgttggtggagcagcaggagcc
gtgtctcgtatcacaggaacacttggtaaaggtctggcagcattgaccatggatgaagag
tacaaacgcaagagacaacaagcaatcaatcaaagaccagcaacattccaagaaggtctg
gctagaggtggaaaaggtcttgttatgggctttgtagaaggcgccagtggcattgtgaca
aatcccttccaaggggccaagaaggaaggtgctaagggattcttcaaaggcgtcggtcga
ggtctgattggagtcgtcgctaagccaacagcaggagttgttgattttgccagtggaaca
ttagaaggtattcggagagtgaccgatgttggtgatgaagtgggcaagttgaggaatccc
cgcgtgctgtatccagatggcatagtgagaccatacaagagagatgatgctgccggtcta
gctctgctacatcaagtagaaaaaggcaaatatgctgccaatgaagactatgtcgcacac
gtggtgctcactacggacaagaaacatgccctggttgtaactacaaagagactgatgtta
gctaccaaaggtgacttgatgggttcttggaccgtagagtttcagtacccctttgtagac
ctgaaagaaccgccaaagcttactgacagaggaatacaaattatgctcaaggagaaggaa
gccggtaagcgaggaggatcaatgaagaaaggactgggtcttttcaaaggcaaacctgct
gcaggaaagatgatacaagtaccagataggggacaagctgaggacttcttggccaaagta
catcatgccatggcagaacttgacaattaa
DBGET
integrated database retrieval system
