KEGG   Amphiura filiformis: 140143024
Entry
140143024         CDS       T10871                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
afil  Amphiura filiformis
Pathway
afil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140143024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afil03019]
    140143024
   03041 Spliceosome [BR:afil03041]
    140143024
Messenger RNA biogenesis [BR:afil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140143024
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140143024
Spliceosome [BR:afil03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    140143024
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 PHM7_cyt DUF5737 RBD_AKAP-17A
Other DBs
NCBI-GeneID: 140143024
NCBI-ProteinID: XP_072021156
LinkDB
Position
20
AA seq 423 aa
MSEEHEPEQVRKLFLGGLNFETTEEDLREYFGKYGEITDTVVIRDKVNKKSRGFGFVTFK
TLASVDHVIKDGREKAQPDTKSGHNIKGRYIECKRAISREDSENENMKLPNKKIFLGGIG
EGXQEDDLKNYFSKYGQVEQVVIPLDKDKKQRRGFAFVVFNNTDDVDKICGFKTHVICGK
KVEAKKAVPQNQMERGGRGGRDGWGGGGGFGGGGFGRRGGGDRFGGGDRFGGGGGRFGGG
GNGGGRFGGGGGYGGGGGYGSGGGYGGGGGGYGSGGGGYGGGGSNYSQVNKLGRSEENAE
TPKLGGNFGGGGGGGDNYSSGGGGYGGGGGGYGQNSGGGGGYGGGNSGYGGGGYGGGQGY
GNGGSSFNNDSFGSNYGGSNSSYGPMKGGGSYGGGRGQGPYQSSFGGGSGGYGGGGGGMG
RRF
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgtcagaagaacacgagccagaacaagtgcgaaagcttttcttgggtggactcaacttt
gagacgacagaagaggacctgagggaatactttggcaagtatggagagatcacagacaca
gtcgtcatcagggacaaggtgaacaagaagtccaggggctttggctttgtcacattcaag
acgttagcctcggtagaccatgtcatcaaggatggaagggagaaggcacagccagacaca
aaatcaggacacaacatcaaaggcagatatattgagtgcaaaagagccatttcaagagag
gattcagaaaatgaaaacatgaaattaccaaacaagaagatcttcttaggtggaatcggt
gaagggnatcaagaggatgatctcaagaactattttagcaaatatggtcaagtggagcag
gtagtcattccattggacaaagataagaagcagaggaggggttttgcatttgttgtattc
aataacacagacgatgtggacaaaatctgtggtttcaagacgcatgtcatttgcggtaag
aaggtggaagccaagaaggctgtgccgcagaaccaaatggagagaggcggtcgtggtgga
cgtgacggatggggaggtggcggtggatttggaggaggtggatttggaagaaggggaggt
ggagatcggtttggaggcggtgatcgttttggcggcggcggtggtcgttttggcggtggc
ggtaatggaggtggacgcttcggtggcggaggtggttacggtggtggaggcggatatggt
agcggaggcggatatggtggtggaggcggtggatatggaagtggcggcggaggatatggt
ggaggcggaagcaactacagtcaggtcaacaaacttgggcgtagtgaagagaatgcagag
acgcccaaactgggtggcaactttggaggtggcggcggcggcggggataactatagtagt
ggtggtggtggttacggtggaggaggaggaggatatggacagaatagtggaggaggtgga
ggatatggaggtggaaacagcggatatggtggaggcggatatggaggaggccaaggatac
ggcaatggtggaagcagcttcaacaacgacagctttggttcaaattacggtggtagcaac
tccagttatggccccatgaaaggaggcggtagctatggcggcggaaggggacaaggccca
taccaatcttcatttggtggcggcagtggtggttatggcggaggtggaggaggaatggga
agacgattttaa

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