KEGG   Amphiura filiformis: 140143591
Entry
140143591         CDS       T10871                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
afil  Amphiura filiformis
Pathway
afil03030  DNA replication
afil03410  Base excision repair
afil03420  Nucleotide excision repair
afil03430  Mismatch repair
Brite
Enzymes [BR:afil01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     140143591
    6.5.1.6  DNA ligase (ATP or NAD+)
     140143591
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     140143591
DNA replication proteins [BR:afil03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    140143591
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     140143591
DNA repair and recombination proteins [BR:afil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     140143591
   NER (nucleotide excision repair)
    Other NER factors
     140143591
   MMR (mismatch excision repair)
    Other MMR factors
     140143591
SSDB
Other DBs
NCBI-GeneID: 140143591
NCBI-ProteinID: XP_072021505
LinkDB
Position
Unknown
AA seq 967 aa
MAQRSIMTFFSPKPAEKKKKKKDKKTVNGLERSPLKTKNDCTESPKSDQTRKKSRRILDS
DDEEEENATSQQSPSQQNGEKETPEKKKDKKKKEEDMEVDESEDKSDKGKTPTKPDGSQP
STSSPETTSPSGIPKRTTARKHMRKRKPDEIQSPTSEKESGHDAKKMKTEDKSADEKEDK
MDTDETPKKGSSKIKEVETKVKEEEKSPKEKKEKEKKKESSKGKKESPKRKVKTPDTEKD
KKKEKTPDTKKERKDKKKETKEKAESPKWKKEVKEEKKEEKDKEEKKEEKKEPESKPKKT
GFSFAQMGKATESSYQPGTSSYHPINDACWKKGEKVPYLALARTLECIEEISSRLKIMEI
LTDFLRSVIVLSPDDLQRCVYLCLNKLAPAYEGMELGMGETHLMKAVSQATGRSMEKIKA
DVAEKGDIGTVAVTSRCNQRTMFAPPKLTVAKVFTNLREIAALTGHSCQSKKIDKVKAML
VACRGCEPKFIVRSLSGKLRIGLAEQSVLVSLGHAVALTTPNQEEEDIVSKRKALSDSWK
KTLDEAALIVKTTYCEMPDYGKIIPAILKHGFKDLPNHCKLTPGIPLKPMLAKPTKGVSE
VLNRFQDIAFTSEYKYDGERAQIHILDSGDVRIYSRNQENNTTKYPDIIKRIPKSLGDNV
KSCVIDSESVAYDLEKKQIQPFQVLSTRKRKDANEADIKVQVCVFAFDLLYLNGESLVRK
PLRERRELLHANFKEIEGEFVFAKSMTSSNTEDIAEFLDESIKGNCEGLMVKTLDVDATY
EIARRSHNWLKLKKDYLEGVGDTLDLVVIGGYHGRGKRAGTYGGFLLACYDEESEDFQSI
CKIGTGLKDDELEQHTKFFKEHIIAKPRAYYRYDSSHEPDHWFDAVQVWEVKAADLSVSP
VHKAAMGLVDREKGISLRFPRFLRIRDDKKPEEATSGSQVADMYNNQDQIKNQKANQKST
ADEEDFY
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggcgcagcgatctattatgacatttttcagtccgaaaccagcggaaaaaaaaaaaaaa
aaaaaggacaagaaaactgtgaatggtcttgagagatctcctttgaagaccaagaatgat
tgcacagaaagccccaaatcagaccaaactcgcaaaaaatccagaagaattttggacagt
gatgatgaagaggaagaaaacgccaccagccaacagtcgccatctcaacaaaatggagag
aaggaaacacctgagaaaaagaaggacaaaaagaagaaagaagaagacatggaagttgat
gagagtgaagacaaatcagacaaaggaaagactcctaccaaaccagatggcagtcaacct
tctacctcatcaccagagacaacttctccaagtggtatacctaagagaacaacagcacgt
aaacacatgaggaagagaaaaccagatgagatccagtctccaacgtctgagaaagaatca
ggacatgatgcgaagaaaatgaaaacagaagacaagagtgctgatgagaaagaggacaag
atggatacagatgagactccaaagaaaggaagttccaaaataaaggaagtagagactaag
gtgaaggaagaagagaaaagtcctaaagagaagaaggaaaaagaaaagaagaaagaaagc
tccaaaggaaaaaaggagagtccaaagagaaaggtgaagacaccggacacggagaaggac
aagaagaaagagaagacgccagacacaaagaaagagaggaaggacaagaagaaagaaaca
aaagagaaagcggaatcacctaaatggaaaaaggaagtcaaggaagaaaagaaagaggag
aaagacaaggaagagaaaaaagaggaaaagaaagagccagaaagtaaacctaaaaagaca
ggattcagttttgctcagatgggtaaagccacagagagttcttaccaacctgggacatca
tcatatcatcctatcaacgatgcatgctggaagaaaggagagaaagtgccttacctagca
ttagcacgcacattggaatgtatagaggagatatcaagtcgtcttaaaatcatggaaatt
ctcacagacttcttacgatcagtcatagtattaagtcctgatgacttacagcggtgtgtg
tacctatgtctgaataaacttgccccggcctatgaaggaatggaattagggatgggcgag
acacatttaatgaaagctgtatcacaagctactggtcgtagtatggagaagataaaggca
gacgttgctgagaaaggagacatagggactgtagctgtaacaagccgttgtaaccagcgc
accatgtttgcaccgcccaagttgaccgttgccaaggtgtttactaacctcagggaaatc
gcggcattgactggacattcatgtcaatctaagaaaatagacaaagtgaaagccatgttg
gttgcatgcagaggatgtgaacccaaatttattgtcaggtcactaagtggcaagctacgc
attggtttagctgagcagtctgtgttagtatcactaggtcatgcagtggcactcacaaca
cctaatcaagaggaggaagacattgtgtcaaagcgtaaagccttgtcagactcatggaag
aagacattggatgaagcggctctgattgtgaagaccacatactgtgaaatgccagattat
ggtaagatcatcccagcaatactaaaacatggcttcaaagatttacccaaccattgtaag
ctgacaccaggcataccattgaaacccatgttagctaaaccaaccaagggagtcagtgaa
gtactcaatagattccaagatattgccttcactagtgaatacaagtatgatggagagagg
gcacagatccatatacttgattcaggagacgtcagaatctacagtcgtaatcaggagaac
aacactacaaagtaccctgacatcatcaaaagaatccccaagagtctgggagacaacgtc
aaatcctgcgtcatcgactcggagtccgtagcgtatgatctggagaagaaacagatccaa
ccattccaggtgttgagtacaaggaagaggaaggacgctaatgaggctgatatcaaggtc
caagtttgtgtgtttgcatttgatttgctctacttgaatggtgagtcattagtgaggaaa
ccattgagggaaaggagagaactgcttcatgctaacttcaaagaaatagaaggagaattt
gtatttgctaaatctatgacatcatctaacacagaagatattgcagaattcttagatgaa
tcaatcaagggtaactgtgaagggttgatggtgaagacattagatgttgatgccacatat
gaaattgccaggaggtctcataattggctcaagctcaagaaagactacttagagggcgta
ggtgacacattagatttggtcgtcattggtggttaccatggcaggggcaagagagcaggg
acatatggaggattcctattggcatgctatgatgaagagagtgaagacttccaatcaata
tgcaagattggtacaggtctcaaagatgacgagttagaacagcacacaaagttcttcaag
gaacacatcatagcgaaaccaagggcgtattaccgatatgattccagccatgagcctgat
cattggtttgatgctgtgcaggtttgggaggtgaaggcagcggatttatctgtgtcacct
gtgcataaggcagctatgggcttagttgatagagagaaaggcatctcgcttaggttccca
agattccttcgtatccgtgatgacaaaaagccagaagaagcaacatctggttcacaggtt
gctgatatgtacaacaatcaagaccaaatcaaaaaccagaaagccaatcaaaaatctact
gcagacgaagaggacttctactag

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