Amphiura filiformis: 140143798
Help
Entry
140143798 CDS
T10871
Name
(RefSeq) pre-mRNA-processing-splicing factor 8-like
KO
K12856
pre-mRNA-processing factor 8
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140143798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140143798
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140143798
Complex C
U5 SnRNP specific factors
140143798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
140143798
NCBI-ProteinID:
XP_072021716
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MAADFAVPPGAYVHMMMQQQQQQQRIPDYMAEEKLQDKARKWQQLQSKRYAEKRKFGFVE
AQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLVENMPMPWEQIRD
ANALYHITELFHLSTVARVIEPVYIDEWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPL
DYADNILDVEPLEPIQMELDPEEDGPVHQWFYDHKPLMDGKCVNGTSYKSWRLTLPMMSN
LYRLANQLLTDLVDENYFYLFDLKSFFTSKALNMAIPGGPKFEPLVRDAGLQDEDWNEFN
DVNKIIIRQQIRTEYRIAFPYLYNNLPKFVELIWYHTPSVVFIKTEDPDLPAFYFDPLVN
PISHRHGVKHPEPLPDDSEEFELPEYIAPFLQDRPLYTDHTASGIALLWAPRPFHLRSGR
HRRAMDVPLVKSWYREHCPSGQPVKVRVSYQKLLKLYVLNALKHRPPKSQKKRFLFRSLK
STKFFQSTTLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREILRLTKLVIDSHVQYRLGNVDAFQLADGLQYIYAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGIWAPGWRVWVFFMRGITPLLERWLGNLLS
RQFEGRHSKGVTKTVTKQRVESHYDLELRASVMHDILDMMPEGIKQNKARTILQHLSEAW
RCWKANIPWKVPGLPTPIENMILRYVKSKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWDTTEGECNVMMESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVLGLHRASEMAGPPQMPNDFLQFQDV
ATETSHPIRLYSRYIDRVHIFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRGVFWDLKNRLPRSITTFIWESSFVSVYSKDNPNLLFNMSGFECRIL
PKCRTTAEEFTHKDGIWNLQNEVTKERTAQCFLRVDDESMGRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADVLLFAAYKWNVSRPSLLADSKDTMDNTTTQKYWIDVQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAFGNWFPGCKPLIQSAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRTKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVALKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATTTRTVNKHGDEIITSTTSNYETATFSSKTEWRVRAISATNLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFITISDLRAQIAGYLYGVSPPDNPQVKEIRCIVLVPQWGTHQTV
HLPNQLPDHEFLKEMEPLGWIHTQPNELPQLSPQDVTTHAKIMADNPAWDGEKTIVITCS
FTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQG
SWNYNFMGVRHDSGMRFDLQLANPKEFYHEVHRPSHFLNFSTLEESEAISSDREDLYQ
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagactttgctgtgcccccaggggcctatgtacacatgatgatgcagcagcag
caacagcaacagagaatcccagattacatggctgaggaaaaactccaggacaaagctcgg
aaatggcaacagttgcagtccaaacgatatgcggagaagcgcaagtttggctttgtggag
gcgcagaaggaggacatgccaccggagcatgtgcgcaagatcatacgcgaccatggtgac
atgaccaacagaaagttcagacatgacaaaagagtgtatttgggagctctcaaatacatg
ccacatgcagtcctcaaactggttgaaaatatgcccatgccgtgggaacagattcgtgac
gccaacgccctctaccatattaccgagctatttcatttgtcaacggtggccagggttatt
gaacctgtatatattgatgagtggggatcaatgtggataatgatgcgacgtgaaaagcgt
gacaggagacatttcaagcgcatgagattcccaccgtttgatgatgaagagccaccgctg
gactacgcagacaacatcctggatgtggagcctcttgaaccgatccagatggagctggac
cctgaggaagatggacctgtacatcagtggttctatgatcataaaccactcatggatggc
aagtgtgtgaatggaaccagctacaagtcctggcgtctgaccctaccgatgatgtccaat
ttgtaccggctggccaaccagcttttgaccgacctggtggacgaaaactacttctatctc
tttgatctgaagtcattcttcacctccaaggcactcaacatggccatacctggaggaccc
aagtttgagcctcttgtacgagatgcaggattacaggatgaagattggaatgaattcaat
gatgtgaacaagatcattatcagacaacagatccgtactgagtacagaatagcattccct
tatctctacaacaatctccccaaatttgtggaactcatctggtatcatactcccagtgtt
gtgttcatcaaaacagaggaccctgatctgccagctttctactttgatcctcttgtcaat
cctatatcacacagacatggagtcaagcatccagaaccactgccagacgacagcgaagag
tttgagcttccagagtacatagcaccgttcctgcaagacagaccactctacacagaccac
acagccagtgggatagcattgctgtgggcaccaaggccattccatctgaggtcggggaga
catagaagagctatggatgtacctcttgtgaagagttggtacagagaacactgtcccagt
ggtcaaccagtgaaggtcagagtgtcatatcagaaactactaaagttgtatgtactcaat
gcactcaaacacagaccaccaaagtcacagaagaagagattcttgttccggtcgctcaag
tcgaccaaattctttcagtcgacgacactcgactgggttgaagtgggtttgcaggtgtgc
aggcaaggatacaacatgctcaacttgttgatccatcgtaagaatctcaactacctgcat
ctggactacaacttcaacttgaagccagtcaagacactcacaaccaaggagcgtaagaaa
tcacgtttcggtaacgcctttcacttgtgtcgtgagatcctgcgtctgacaaagctagtc
attgacagtcatgtacaatacagattaggcaacgtggatgccttccagcttgcggatggc
ttgcaatacatctacgcccatgtgggtcagctgactggtatgtaccgttacaaatacaaa
ttgatgagacagatccgtatgtgtaaagatctcaagcatctcatctactacagattcaac
acaggtccagttggcaaaggtcctggctgcggcatctgggccccaggctggcgtgtctgg
gtattcttcatgcgtggcatcacaccgttgctggagcgttggcttgggaacctgctgtca
cgtcagtttgaaggacgacattctaaaggcgtgacaaagactgtcaccaagcagagggtg
gagagtcattatgacttggagttgcgtgcatcggtgatgcacgatatcttggacatgatg
ccagagggtatcaagcagaacaaagctaggaccatcctgcaacatcttagtgaagcctgg
agatgctggaaggccaatataccatggaaggtgccaggattacctaccccaattgagaac
atgatcctcagatacgtcaagtcaaaagccgactggtggacaaatacggctcactacaat
cgtgagcgtatccgacgtggcgccaccgtggacaagacagtgtgcaagaagaatctgggc
cgactgacaaggttgtacctgaaagctgaacaggagagacagcataactacctgaaggat
ggtccatacatcactgctgaagaagccgtagccatctataccaccaccgtgcattggttg
gagagtaggcgtttctcacccattccattccctcctctgtcatacaaacacgacaccaag
ctgctcattctagccttggaaagactcaaggaagcatacagtgtcaagtcccgtttgaac
caatcacagagggaggaattaggtctgatagaacaggcttatgataaccctcacgaagcc
ctcagcagaatcaagcgtcacttgctaacacagagagccttcaaagaggttggtatagag
ttcatggatctctacagccatctgatccctgtctacgatgtggaacctttagagaagatc
acagatgcatacctggatcagtacctatggtatgaagcagacaagaggagattatttcca
ccgtggatcaaaccagccgacacagaacccccaccactgttggtatacaagtggtgtcaa
ggcatcaataatctccaagatgtgtgggacacgacagagggtgagtgcaatgtgatgatg
gagtcacgattcgagaagctttacgagaagatagatttgacgctactcaacagactgctg
cgtctcatcgtagatcacaacatcgccgattacatgacggccaaaaacaatgtggtcatc
aactacaaggacatgaaccacaccaattcttacggtattatcagaggtctccagttcgcc
tccttcattgtacagtactatggcttagtgttggatcttcttgtgttaggtctacatagg
gctagtgagatggctggtccgccacagatgccaaatgacttcttgcaattccaggatgtt
gccactgagaccagtcacccaattcgactctactccagatatatcgacagagttcatatt
ttcttcagattcagtgcagaggaagcccgggatctcattcagcgctacctgacagaacac
cctgatcctaacaatgagaacattgtaggatataacaacaagaaatgttggcccagagat
gcacggatgagacttatgaagcatgacgtcaacttgggtcgtggtgtattctgggatctc
aagaaccgcttgcccaggtctattaccaccttcatatgggagagtagctttgtgtctgta
tacagcaaggataatcccaacttgttattcaacatgtctgggtttgagtgtcgtatactt
cccaaatgtcgcaccacggcagaggagttcacccacaaagatggtatatggaatctacaa
aatgaggtcaccaaagaaaggacagcacagtgtttcctgagagtagatgatgagtccatg
ggacgattccacaacagagtcagacagatactcatggcatcagggtctacaacctttacc
aagattgtcaacaaatggaataccgctctcattggtctgatgacctatttccgggaagct
gtcgtcaacacccaagaactgctggaccttctggtcaaatgcgagaacaagattcaaaca
cgtatcaagattggactcaactccaaaatgcctagtcgtttcccgcctgtggtgttctac
acgcctaaagagttgggaggattgggtatgctgtccatgggacatgtacttataccacaa
tcagatttgaggtggtccaagcagacggatgtcggcatcacccatttccgttccggtatg
agtcacgaggaggatcaactcattcccaacttgtatcgctacatccagccatgggagagt
gagttcattgattcgcagagagtgtgggcagagtatgcgttgaagagacaggaagctaat
gcacagaacagacgtctgactctggaggatttggaggattcctgggaccgtggtattccc
cgtattaacactctgttccagaaagacagacatacattggcctatgataagggatggaga
gtcagaacagacttcaaacagtaccaggtcctgaagcagaatccattctggtggacccac
cagcgtcatgacggtaaactgtggaatctgaacaactacaggacagacatgatccaggcc
ctgggtggtgtggaaggcatccttgagcatacgctattcaagggaacttacttcccaacg
tgggaaggtcttttctgggagaaggccagtggatttgaggagtcaatgaagtacaagaaa
ctgaccaatgcccagcgatctggtttgaaccagatccccaacagacgattcaccctgtgg
tggtctcctacaatcaacagagctaatgtgtatgtaggtttccaggtccagctggatctc
acagggatcttcatgcacggcaaaatcccaactctgaagatctccctcatccagatattc
agggctcatttgtggcagaagattcacgagagtgtggtcatggacttgtgtcaggtgttt
gatcaagagttggatgcattggagattgagactgtccagaaggaaaccatccatcccagg
aagtcatacaagatgaacagctcctgtgctgatgtcctgctgtttgctgcctacaaatgg
aacgtatcaagaccatcactgcttgccgactcaaaggatacgatggacaacacaaccaca
cagaagtactggatagatgtgcagctgagatggggagactacgactctcacgatatagag
cgttatgccagagccaaattcctggactacaccacagataacatgagtatctacccatca
ccaacagggcttctaatagccatagatctggcttataacctgcatagtgcatttggcaac
tggttcccgggttgcaagcctctcatccagtcggcgatggccaagattatgaaggccaac
cctgcactgtacgtgttgagagagcgtatccgtaaaggtctccagctgtactcatcagag
ccgactgagccgtacctgtcgtcgcagaattatggcgagttgttctccaaccagatcatt
tggtttgtggatgatactaatgtgtacagagtcaccattcacaagacctttgagggtaac
ttaaccaccaagcccatcaatggagccatctttatcttcaatccaagaacaggacagctt
ttcctcaagattatccatacctctgtatgggctggacagaaacgtcttggtcagcttgcc
aaatggaagacggctgaagaagttgctgctttgatccgatctctgccagttgaggaacag
ccaaagcagatcattgtcaccaggaaaggcatgttggatccccttgaggttcatttattg
gatttccccaacattgtaatcaaaggcagtgagttgcagcttccgttccaggcgtgtctc
aaagtggagaagtttggcgatctgatcttgaaggccacagaaccgcagatggtactcttc
aatctgtatgacgactggctgaagacaatctcatcgtacacggcattctcacgtctgatc
ctcatattgagggcgctgcatgtcaacaacgatcgcaccaaagtgatcttgaagccagac
aagacaactatcaccgagccgcatcacatctggccgacgctgactgacgaagaatggatc
aaggttgaggtagctctgaaagatttgatccttgcggattatggcaagaagaacaatgtc
aatgttgcctccctgactcagtctgagattcgtgacatcatcctaggtatggagatatcg
gcgccctcgcagcaacgacagcaaattgccgagattgagaagcaaactaaggagcagtca
cagctgacagcaaccactactaggactgtcaataaacatggtgacgagatcatcacatca
acaacgagcaactacgagacggcaacattctcctccaagacagagtggcgtgtgcgagcc
atctccgcgactaaccttcacctgcgtaccaatcacatctatgtgtcatcagacgacatc
aaagagacagggtacacgtacatcctccctaagaatgtcttgaagaagttcatcaccatc
tctgatttgagagcacagattgcaggttacttgtatggagtgagtcctcctgataaccca
caagtgaaagaaatcagatgtattgtgcttgtaccacagtggggaactcaccaaacagta
catctaccaaatcagcttcctgatcatgaattcttgaaggaaatggaaccacttggctgg
atccacacacagcccaacgagctgcctcagctctcccctcaggatgtgaccacacatgct
aagatcatggctgacaacccagcatgggatggtgaaaagacgatagtcatcacatgcagt
ttcaccccaggatcatgttctctgacagcctacaagctaacacccagtggatttgaatgg
ggacgacagaacacagacaaaggcaacaaccccaagggatacctgccgtctcactatgag
agagtacagatgctgctatcagatagattcctgggattctttatggtcccagctcaagga
tcatggaattacaactttatgggtgtgagacatgattcaggcatgcgatttgaccttcag
ctagccaacccaaaggagttctaccatgaggtccacagaccatcacatttcttgaatttc
tctactctggaagagagcgaggcgataagcagcgacagagaagatttgtaccagtag
DBGET
integrated database retrieval system
