Amphiura filiformis: 140143803
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Entry
140143803 CDS
T10871
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
afil Amphiura filiformis
Pathway
afil03018
RNA degradation
Brite
Enzymes [BR:
afil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
140143803
Messenger RNA biogenesis [BR:
afil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
140143803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140143803
NCBI-ProteinID:
XP_072021717
LinkDB
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Position
Unknown
AA seq
529 aa
AA seq
DB search
MVDVTRYNFDELLPEVKAHIEASSFVALDTEFTGLHVEGSTGNSLFDSPDLRYEKLKQLT
SQFTVCQIGLCAFVKEPKKNSYVGHAYNFYLFPRSCADIDARFLCQASSLEFLVQHNFDF
NRLFYDGISYMNTTQEKSLKEQPVIEMARGVDEDMLKHCHTVIAEWLPSTIEGDKLPLDV
TLSDKFVSLQLQTMLRDYFPVIWTNTSATGQVIVKRVSEESRKELEKATENRLLEYILGF
THVFRILVESKKPLLGHNMVTDLLFVHEKFHNPLPDKFSDFKKAIHTLFPQVVDTKHLSF
KLKKELIEKGLPVTSTGLDQLYQNLCSDKGRFLVLHSPYIELSQIQCKYKDSHPLHEAAY
DAYLCGYVFLRLAHFQAAKKISATVSSPLGFRAILDAVKPWMNKLNLIRANVPYINLAGP
DPPSRRPRLLHVSAIGMSTVSASKLAEEFSIYSSVDVQLVDKRNALLAVSTYGGCKDIMR
AFKDHKTLRVKHYNVFQHSRPVRYTLWGAIAVLGAACLWTLFGDQGKVR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgtaacaaggtataattttgacgaacttctgccggaagtcaaggctcacatt
gaagcgtcttcatttgttgcccttgacacagagttcacaggattacatgtggaaggtagt
actggcaatagcctgttcgactcgccggatttgcgctatgaaaaactcaaacagctaact
tcacagttcactgtctgtcaaatcggtctgtgtgcttttgtcaaagagcccaagaaaaac
agctatgtgggacacgcatacaatttctacttattcccgagaagttgtgctgatattgat
gccaggtttctgtgccaagcatccagcttggagttccttgttcagcacaactttgatttc
aacaggctgttttatgatggcatcagctatatgaatacaactcaggagaagagcttgaaa
gagcaacccgtcattgagatggcaaggggtgtagacgaggacatgttgaaacattgtcat
acagtcatagcagaatggttaccaagtacaatagagggtgacaagctgcctctagatgtc
acattgtcagacaagtttgtctcattacaattacaaaccatgctgagagattactttcca
gtcatctggacaaatacttctgctacaggacaggttattgtgaaaagggttagtgaagaa
tcaaggaaagaacttgaaaaggcaacagaaaataggttacttgaatacatcctgggtttt
acacatgtctttaggatacttgtggagagtaaaaagcctcttttaggacacaacatggtg
acagatctactattcgtccatgagaagtttcacaatcctcttccagataaatttagtgac
ttcaagaaagccatacatactttgttccctcaagtggttgataccaagcacctgtcattc
aaattgaaaaaggagcttattgagaaaggtctaccagtcacatctacaggtcttgatcaa
ctctaccagaatctatgcagtgacaagggcagatttctggtgttacattctccatacata
gagctttctcaaattcagtgcaaatataaggatagtcatccactccatgaggctgcctat
gatgcttatttatgtggttatgtgtttctgaggttagcccacttccaggcagcaaagaag
atcagtgcaacagtaagttccccattgggatttcgagccatactagatgcagtcaaaccc
tggatgaataagctcaacctcatcagagccaatgtaccatatattaatcttgctggtcct
gatcctccatccagacgacctagactactgcatgtgtctgcaataggaatgagtactgtc
agtgcttcaaagcttgctgaagaattcagtatttacagttcagttgatgtacagttagtt
gataagcgtaatgcactcttggctgtgtctacatatggaggatgcaaggatatcatgaga
gcattcaaagatcacaagacgctacgggtgaagcactacaatgtgttccaacattccaga
ccagtaagatatactttatggggtgcaattgcagtactgggtgcagcgtgtttatggact
ctctttggtgaccaagggaaggttaggtga
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