Amphiura filiformis: 140144703
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Entry
140144703 CDS
T10871
Name
(RefSeq) pre-mRNA-processing factor 17-like isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140144703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140144703
Spliceosome [BR:
afil03041
]
Complex C
Other components
Step II factors
140144703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
eIF2A
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
140144703
NCBI-ProteinID:
XP_072022614
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MAAIAALQSYGSSDSENGSDDDTNEAPSADATAHLRPLESASNVQDIQKRLQINAAPVVE
TKESVGSLRPLDPSTKQVSYNPQYDEIFTPEVGPSNPFKTQQQTAQKNMLAGYVEPAHFN
AFQFENQRRTFTSYGFAVDPSVTDTGASKVVTSVELLGDNKDKTVFEKTKDRPKDKRKRV
RKLDPSDIDGYEGPWGKYVDEQTVSKPSEEQQVELDEILAKRSKNKKKVEEKSAEEKTTL
HIKDAYDYQGRSYLHVPQDIDVDLRSQEPPEKCYLPKKHIHSWTGHTKGVAGIRLFPKSG
HLLLSCGMDSKIKLWEVYNQRRLIRTFNGHKQAVRDASFSNDGDKFLSAAYDRYIKLWDT
ETGECISRFTNRKVPYCVKFQPDEDKQHIFVAGMADKKIVQWDMRANEIVQEYDRHLGAV
NTIQFVDNNRRFVTTSDDKSLRVWEWDIPVDFKYIADPSMHSMPSTTLSLNGKWLGCQSM
DNQILIYGAMNRFRLNKKKIFKGHMVAGYACQMDFSPDMSYVVSGDADGKLNIWDWKTTK
LYSKLKAHDGVCIGCVWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgatcgcagcgttgcaaagctacgggagtagcgatagtgaaaatggcagtgac
gatgacacaaacgaagccccgtctgctgatgccacggcacatttacgaccccttgagtct
gctagcaatgtccaagatattcagaaacgtttgcaaataaatgcagcacctgttgtggaa
acaaaggaatcagtgggtagtttgagacctctagatccatccacaaaacaagtcagctac
aatccacaatatgatgaaatatttacacctgaggttggaccatcaaatccatttaaaacc
caacaacaaacagctcagaaaaatatgctggcaggttacgtggaaccagcccacttcaat
gccttccaatttgagaaccagaggcggacattcaccagctatggttttgctgtagatccc
agtgtcacagacacaggagcatccaaagtggtcaccagtgttgagctgcttggggacaat
aaagacaaaaccgtctttgagaagacaaaagacagaccaaaggacaagaggaaacgggtg
aggaaattagatccaagcgacattgatggatatgaaggtccatggggcaaatatgtggat
gaacagacggtttccaaaccatcagaggaacaacaagtagaacttgatgaaattttggca
aagagaagtaaaaacaaaaagaaggttgaagaaaagtctgctgaagagaagactacatta
cacatcaaagatgcctatgactaccaaggcaggtcctacctacacgtacctcaagatatc
gacgtggacttacggtcacaagaaccgccagagaaatgttacctgcccaagaaacacata
cacagttggacgggacatactaaaggtgttgcgggcattaggttattccctaagtcaggt
catctgttgttatcgtgtggtatggattctaagattaagttatgggaggtttacaaccag
aggcgactcataaggacattcaacggccataaacaagctgtaagagatgcatcttttagc
aatgacggcgacaaatttcttagtgctgcatatgatagatatatcaagctatgggacaca
gaaacaggtgaatgcatcagtagatttacaaatagaaaggtaccatattgtgtcaagttt
cagcctgatgaagacaagcagcacatatttgtggctggaatggcggacaaaaaaattgta
cagtgggatatgagggccaacgaaatagtgcaagaatacgacaggcatctgggtgcggtc
aacacaatacagtttgtagataacaatagaagatttgtcacgacgtcagatgacaagagt
ctgcgagtttgggagtgggatattcctgtggacttcaagtatatcgctgatccaagcatg
cattcaatgcccagtactacactgagtcttaatggtaaatggcttggttgtcaatcaatg
gacaaccagattcttatctatggtgctatgaataggtttagactgaataagaagaaaatc
ttcaaaggacacatggttgctggttatgcatgtcagatggacttctcaccagatatgagc
tatgtggtgtccggtgatgcagatggtaaactaaacatatgggactggaaaacgaccaag
ttatactctaaactcaaggcacacgatggcgtatgcattggatgtgtgtggcatccacat
gaaacgtctaaagttattacgtgtggatgggatggacagattaagttatgggattaa
DBGET
integrated database retrieval system
