Amphiura filiformis: 140144799
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Entry
140144799 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
afil Amphiura filiformis
Pathway
afil03030
DNA replication
afil03410
Base excision repair
afil03420
Nucleotide excision repair
afil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140144799
03410 Base excision repair
140144799
03420 Nucleotide excision repair
140144799
03430 Mismatch repair
140144799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afil03032
]
140144799
03036 Chromosome and associated proteins [BR:
afil03036
]
140144799
03400 DNA repair and recombination proteins [BR:
afil03400
]
140144799
DNA replication proteins [BR:
afil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140144799
DNA Replication Termination Factors
ELG1-RFC complex
140144799
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140144799
DNA repair and recombination proteins [BR:
afil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140144799
Check point factors
HRAD17(Rad24)-RFC complex
140144799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_lid_RFC1
nSTAND_NTPase5
AAA_14
Mg_chelatase
Rad17
Viral_helicase1
AAA_16
AAA_11
Gp44_lid
AAA_19
ABC_tran
AAA_5
AAA_assoc_2
nSTAND3
RuvB_N
AAA_24
AAA_28
MeaB
AAA_18
AAA_30
NTPase_1
AAA_23
SLFN-g3_helicase
MipZ
bpMoxR
Motif
Other DBs
NCBI-GeneID:
140144799
NCBI-ProteinID:
XP_072022702
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MLGKMASEKVEAMETESNTKKDAPSKSGKSGSSTYQAPWVEKYRPTLLSDVVGNEETISR
LGVFAKEGNVPNIIIAGPPGTGKTTSILCLXEALLGPSYKEAVLEMNASNDRGIDIVRNK
IKMFAQKKVTLPKGRHKIIILDEADSMTSGAQQAMRRTMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYSKLTDKQLLKRLLEVCEMENVDHTDDGLEAIIYTAQGDMRQAVNNLQST
HSGFGVVNSENVFKVCDEPHPLLIKDMLGHCLQADIDKAFEVMQHMWRMGYSPEDIIGNM
FRVCKTFQMAEYLKLEFIKEIGFTHMRIAEGVNSLLQLSGLLARLCQKSALPPEEA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgttaggaaaaatggcatcagaaaaagttgaggcaatggagaccgagtcgaatacaaag
aaagatgctccaagtaaatctgggaaatcaggatcatcgacgtaccaagctccatgggtt
gagaagtacagaccaactttgctatcagatgttgtcggaaatgaagaaactatcagcagg
ctgggtgtgtttgccaaagaaggaaatgtaccaaatatcattattgctggtcctccagga
actggaaaaacaacaagtattctctgcctangcgaggcgctcttgggaccatcttataaa
gaagcagtattagaaatgaatgcatcaaatgacaggggtattgatattgtgaggaataag
ataaagatgtttgctcagaagaaagtcacattaccaaaaggacggcataaaatcatcatc
ttagatgaggcagacagtatgacgagtggagctcaacaagccatgaggcgaacaatggaa
atctactccaagacaaccagatttgccctggcgtgcaatgcatccgacaaaatcatcgaa
cccatccaatcacgatgcgctgtcttacgatattccaaactcaccgacaaacaactgctg
aagcgattacttgaagtatgtgagatggagaatgtagatcatactgatgatggtttagaa
gcaatcatctacacagcacaaggagatatgagacaggctgtcaacaatctacagtccaca
cattcaggttttggagtggtcaatagtgaaaatgttttcaaggtttgtgatgagccacat
ccactattaatcaaagatatgttagggcattgtctccaggctgacattgataaggctttc
gaagtcatgcagcatatgtggcgtatgggatactccccggaggacatcataggaaacatg
ttccgagtttgcaagacttttcagatggcagagtaccttaaactagaatttatcaaggag
attggattcactcatatgagaattgcagagggagtgaactcacttcttcaactttctgga
ctcttagcaaggttatgtcaaaaatcagctcttccgccagaagaagcctaa
DBGET
integrated database retrieval system
