Amphiura filiformis: 140145361
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Entry
140145361 CDS
T10871
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
afil Amphiura filiformis
Pathway
afil04137
Mitophagy - animal
afil04140
Autophagy - animal
afil04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140145361
04137 Mitophagy - animal
140145361
04148 Efferocytosis
140145361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afil03000
]
140145361
Transcription factors [BR:
afil03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140145361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HIF-1a_CTAD
HIF-1
bHLH_HIF1A
DUF3271
Motif
Other DBs
NCBI-GeneID:
140145361
NCBI-ProteinID:
XP_072023230
LinkDB
All DBs
Position
1:complement(32688613..32767225)
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AA seq
903 aa
AA seq
DB search
MPHSMCAQLDKAGIMRLILSYLKVRKLVPTVHNIKQEVEDEEEERCDSPVISVDQILDSC
YQKALEGFVIILSSEGDIIYLSDCVSKYLGLKQTDLMGHSVYDFTHQCDHAEIKEQLSSR
HMTIGGTGGNMKSTKHRRHHHNFLIRFKCTLTPRGKKVNLKSAVYKVIQCSGHVQTVPAE
TILGYRFPPMPCLAMVGNPIHHPANIEIPLDGQTFLTRHSMDMKFTYCDDRIKELLGYES
KELVGRSFYDFYHALDNAAIEKCHRDLFAKGQTRTGSYRFLAKEGGYAWLQTEATVIYSN
KTNKAQCVVCVNYCLSSIENDGLILSTDQCTSDSDSGIELSTESVFAPKTDEDRPQEELL
FWLSKEPPDKEGEEEEQEEDVIKETGDKLSPVAGDDVNLLDFINKFQGDVPQTDQEQETE
EELLSVANMSLRETEEQQMFVPFDPFAPLIDDNKLTTIEELASDADKVTSKQDGYYSPPS
SVPTKSILTGSTDPLMPDSRPPLENRKEKGQMALEDLELRAPYIPMEEDFELGAESNEMT
TPFSSTLGDTWVPVDPFGNNDKRMERRSRSLCPSPFSTPCLTPQSVTSPLGSPVPSPRPV
SSPQASPGANIQERGGARGGGGNLNAMQSRSLTNLTVPQVNYLAASPQPMNYGGMPSSPL
MPDKAQPSPLPSPRNILAHPAPLETSFMIHTQISPTPPVASPACPNKRKVSDTAVSMPGL
VSMLKRKSTGCVSSNDGPVGKTRRGCSGLKIQTSTPAIRNPAPKQLVWDPPNTGLMSNLL
LMPQHQVSGIGEPGSYTQFLHRVLNVSNQNGLDGNGKSAPGLGASLIQQISAQELKTVKK
PSKPPDGIQRRDSLPLIDCQDAEVNAPVMSFGGLLQGDALLRALEDQTMNRVPSQEDLQK
YQQ
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgccacacagtatgtgtgcccaactggacaaagctggcattatgaggctcatacttagc
tatctcaaagtcagaaaattagtaccaactgtacataacatcaagcaagaagtagaagac
gaggaggaagaaagatgcgacagccccgtaatttcagtggaccaaatcttagacagctgc
taccaaaaagctttagaaggttttgtaataatcttatcatcagaaggagatataatatac
ctatcagactgtgtctcaaagtatcttgggctgaaacagacggaccttatgggacacagt
gtttatgacttcacacaccagtgtgaccatgcagaaattaaggagcagctctcatcaaga
cacatgaccattggtggcaccggcgggaatatgaagtcaacgaagcaccgcagacaccac
cacaacttcctaatccggtttaaatgcaccttaacaccaagagggaagaaggtcaactta
aaatcagcagtttataaggttatacagtgtagtggtcatgtacaaacagtacccgcagag
accatcttgggctaccgcttcccgccaatgccctgtttagcaatggtaggcaaccccatc
catcatccggccaacattgagatcccgctagacgggcagacgttccttacaagacacagt
atggacatgaagttcacatactgcgacgacagaatcaaagaattacttggctacgagagt
aaagagttagtgggcagatcgttctacgatttctatcacgctctagacaatgctgctata
gagaaatgtcacagagatttattcgccaagggacaaacacgaacagggagctaccgattc
ctagctaaagaaggcggatatgcgtggcttcagacggaagcaacagtcatctacagcaat
aagacaaacaaggcacagtgtgtagtatgcgtcaactattgtttaagttcaatagagaat
gacggactgatcctctccaccgaccagtgcactagcgattccgacagtggtattgaactg
agtacagaaagtgtattcgctccgaaaacagatgaagatagaccacaagaagaactgcta
ttctggctctccaaggaaccacctgacaaagagggggaggaagaggagcaagaggaggat
gtgataaaggagacaggagacaagctttccccggtagcaggggacgatgtaaatcttctg
gatttcatcaataagttccaaggtgacgtaccgcagaccgatcaagagcaggaaacggaa
gaggaactactaagtgtggcaaatatgtcactgagggaaacggaggaacagcagatgttt
gtaccatttgatccgtttgcgcctctcattgatgataacaaactgaccactattgaggaa
ctggctagtgatgcggacaaagtgaccagtaaacaggatggctactattcaccaccatca
tctgtaccaaccaagagcatcttaacaggcagcactgatccacttatgccagactccaga
cctcccttagagaacagaaaggaaaaaggtcagatggcccttgaggacctggaattgagg
gcaccctacatcccaatggaagaagattttgagctgggagcggagtccaatgaaatgaca
acaccgttcagtagtactttgggtgacacatgggttccagtggatccatttggcaacaat
gataagagaatggagcgcagatccagaagtctttgtcctagcccattcagcacaccgtgt
ctgactccccaaagtgtcacgtctccactgggctcaccagttccatctccaagaccagtc
tcctctcctcaagcatcaccaggggccaacatccaagaaagaggaggggccagaggtgga
ggaggcaatttgaacgccatgcaaagccgcagtttgacgaacctcactgtgccgcaggtg
aactacttggctgcatcgccacagccaatgaattacggaggaatgccttcatcacctctt
atgccagacaaggcacaaccatcgccattaccatcaccaagaaacatccttgctcatcca
gctcctttagaaacatctttcatgatacacacacagatatcaccaacaccacccgttgca
agtccagcatgtcctaacaaacgcaaagttagtgacacagctgtgtcaatgccaggattg
gtgtcgatgttgaagagaaagtcaacagggtgtgtgtcaagcaatgatgggcctgttggc
aaaacgagaaggggctgcagtgggttgaaaatacagactagcaccccagctataagaaac
ccagctccaaaacagcttgtttgggatccaccaaacacagggctgatgagtaacctactc
cttatgcctcaacaccaagtcagtggaattggagagcctggcagctatactcagtttctg
catagagttctgaatgtctcaaatcaaaatgggcttgatggaaatggaaagtctgcacct
ggcctcggcgcctcgctcatacaacagatctctgcgcaagagttgaaaacagtgaagaaa
cccagcaaaccaccagatggaattcagcgaagagattcattaccactgattgactgtcag
gatgctgaagtcaatgcccccgtgatgtcttttggaggtctgctccaaggggatgcgtta
ttacgtgcgttagaagatcagactatgaacagagttccgtcacaggaggaccttcaaaag
taccaacaatga
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