Amphiura filiformis: 140146124
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Entry
140146124 CDS
T10871
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
afil Amphiura filiformis
Pathway
afil04512
ECM-receptor interaction
Brite
Lectins [BR:
afil04091
]
C-Type lectins
Lecticans
140146124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140146124
NCBI-ProteinID:
XP_072023981
LinkDB
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Position
2:34643943..34711313
Genome browser
AA seq
2267 aa
AA seq
DB search
METCNPAMVTAFLFAVLTFHSSLVIGQLVVTNRGLNVPIGRSVYVDPSTLYIEPPLPGEV
CKVEVAVQEPFYQRVGRLEPQVFDCHYYPNSVQYIHTGSPMLDFDIVKARIYKFTATETV
KETIFIFVNVTLDPYRSISPMMPLEVDEFFGRSDPLDVRVVDFIFDRWQNASCRVRMNSV
LSGWPRYGQLIKGENAQQARAVYETCDDFHFMNIRYEHLIPPTPNIDFIVLTVEVDDPTL
HHEPFEERYFHPVVIVPGFPNQPPTASFSSAYVMEADQFIMTTITPEIMSGSDGETASDQ
LVFFISQPLGPGEGSIVHLDDHTKDIESFSQQDLNNLNIAYKPPSTSDPERRVFEVVFQI
ADSYFQVSQPIRLLISVRASNTNGPRVSTNTGLTLLEGQSRPIRDKNLAVVDNDNLFMVR
LKIVGGLHHGRLLVNNRPAIMFSPFDIQDGVVVYHHDGSDTKKDSVELRITDGRDTVRTT
LPINILPIDNNPPSLITNIQIEVDEGKAVKVTRFMLLASDKDSNDDYIIYRITRPPAAGE
ILKKFSEDSYGYPVTEFTQRDLFRGLLYYQHLGQEIFDDSFDLVLLDSHVPPNISPTQTV
MIKVNPVNDIPPKAVSGLVLSITVPETDIAFITRENLQYTDSESPDDDLQYTITTPPHFI
ATQSVTDAGRIYSAAGVIMPMKDQTMSPLQSFQQRDINQRTIAYMPPFKEIGPNPREVQF
VYSVSDPFGNVVVGNVFDITVTPVNDKPPVIYTNDLTVNEGGDVTISPTKLSVTDMDTLP
AELVITLWKEPSKGRIVVGGENMTIGGTFTMEDITANRVRYVHYGSEDSTDQFEIIASDG
AQQASQTIHITILPINDQIPQLVKGLVTQVTIHEGEELIITPDILLATDVDTNDMLLHFI
VVKPPKRGILVKNGVTTTRFRQMDITEGFVKYRHASGETGDEPVYDEITFIVSDKSIPTA
ENLPVHDLRITILPIDNQAPRIVFGNPYFVNEGSKEVFTLDVLSAVDRDTALDELTFYIT
EQPEWGFVENILPKPGFEKSNAGKPITFFTFEHLRDGYINYVQSIHEGFEPRSDSLILYV
TDGQHYSANVTFIINIIPQNDEIPVLTIQNFTIFENSFFKITTEYIDAFDFDVPMEMLVF
SIVDPPQHGMLVDRALPEHVRLPIFDFNLNQLQNTLKFTYEHDGSETTHDRFSIRVTDGK
HTVRKPLDIEIIPVDDMAPRIIKNTGITVSLQDYRVMSAVILQSTDLDTPDTHLYYVIKS
YPRRGVLQRYVEGVWKDLSNGGNFTQEDLNMNLIRYLHTSELGSKGLDRFRFDVTDGVRN
TGKESVLITIKNTRREPLRINNYGLELREGERKIIPIEQLSAYDNSNNLAEIQFTVTTPP
AQGHVERIGKIGYPVTAFTQLDLTGQQIVYNHLRIDQVQNDQFTFSVTNGLQVKNDTFHV
VVIPIDDQLPVLTTNVALNVPQNGYQVIKPTNLEAVDQDTFSTRVEYVITQPPLYGQLLK
GGLPIEDTFTQADIDNGDIVYRHMIEKAAQDEFYFNVFDGTNVGYVVNNLVYNQPLRYAI
NIELVDNSPPRLVAKVIPNKLEVQNGRYAYTLSDAFLRADDECNADSVVYSVVAEPLFGH
FENVATRRRVQGKFTQQDVNDRIIKYIMRDSARVTNDSFTFDLWDCNENALRNQRFEFRW
SIILFNREEFMVCETMGTLSIGILRVGNLLMSSFVGIESHSLTAKEGLDFAPNRANQIQF
DPGVSQAVWTVDIIPDDLEENRERFKVMLSNPVNAVLGEYDQVKVVIKDSKDGACRGEEG
PGGPTITGTQTCCGPDGLPYSPDGGPLMPELPPGVPQPGQPLLPGMHPDEQVPGMPHLGP
NGPYLGPVIPPQDMPIYNGEYFETTGGDGFPQGVYPGHGDGQDQPVLYPGQPDGECCPPD
VYSGPYPVPGTQQQPGPYPQGSQGSGGQGGSNTQTSVWRNGTHTRWTFHGIGSMPTNVQS
RGGSSTNSRTGSQTPSGGAFQHVPPGDPNQGAFESTGLRHIPLSNQDRGTPEGGIHQNQQ
ENRQQQQHVSSSGQFAGVPVSGFTQESLPVISGQGSQQGQQGVDVPHDTSFTTRCTRDNR
GEIYHDKRTAKVYQCDGQTWRDWVVIGLQGPTRQPPESTGCPLGWHGNNARCYLMSTIET
TWNEAQRICREQHDSNLVSIRSKAEQKWIASLVAGQYIWIGANDKFVEGNWEWISNDPVT
YTRWKPGSPHLDEQHNINCAMVSRRMRWMDSSCEEGTNFFVCMKPSV
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtgtaacccagcaatggtaacagccttcctattcgctgtcctcacctttcat
tcatcgcttgtgattggccagttggtagtaacaaatcgtggattaaacgttcctattggt
cggtctgtctacgtggatcccagtacattgtacatagagccgcccttgccaggagaagta
tgcaaagttgaggtggctgtgcaggagccgttttatcagagggttggcagattggaacca
caggtttttgactgccactactacccaaactctgtacagtacattcacacaggttcaccc
atgttagactttgacatagtcaaggcaagaatctacaaatttacagcaactgaaactgtg
aaggagactatcttcatctttgtcaatgtgactcttgacccctatcgttccatatccccc
atgatgcccctggaggtcgacgagttcttcggcagatccgatccgttggatgtaagagtc
gttgatttcatattcgatcggtggcagaatgcttcatgtcgtgtacgaatgaatagcgtc
ctaagcggttggcctcgatacggacagcttatcaaaggtgaaaatgcgcaacaagcgagg
gcagtctatgaaacctgcgatgactttcattttatgaacatccgctatgagcatctaata
cctccgactccaaatatagatttcatagtattaacagttgaagtagacgacccgacactt
catcatgaaccgtttgaagagcgatattttcatcctgttgtaatcgtccccggattcccc
aaccagccccctactgcatcgttctcaagtgcttacgtcatggaagcggaccagtttatc
atgacaacgattactccggaaataatgtcggggagtgatggtgaaacggcatctgatcag
ctcgtattttttataagccaaccactcggacctggcgaaggaagtatagttcacttagac
gatcatacaaaggatatagagtcgtttagtcaacaagacctaaataatttaaacattgca
tacaaaccgccaagcaccagtgatccggaaagacgagttttcgaagtcgtttttcaaatc
gcagattcgtacttccaagtaagccaaccaatcagacttctcatatctgtcagggcgtct
aatacgaacggccctcgtgtcagcacaaacacagggctgacactgctggaaggccaatcc
agacctatcagagacaaaaacttagcagttgttgataatgataatttattcatggttagg
ttaaaaatagtcggtggtttgcatcacggacgtttgctagttaacaacagacccgcgatt
atgttttcgccctttgacattcaagacggagttgtcgtatatcatcacgatggcagcgat
acaaaaaaagatagtgtggagttaagaataacagacgggcgcgacacagttcgcacaacg
ctgccgataaacattcttccaatcgataataatcctccgtcactcattacaaatatccaa
attgaagttgatgaaggaaaagccgtaaaggtgactcgctttatgttgctagcctccgac
aaagactccaatgatgactatatcatttatagaataacacgccctcctgcagcaggagaa
atcttaaagaaattttccgaagattcgtacggttatccagttacagaatttacgcaacga
gatttattcagaggcttgctttattatcaacatttggggcaagaaatattcgatgattcc
ttcgatttagtgttgctagatagccatgtgccgcctaacatatctcctacgcagacagtt
atgattaaagtaaatcctgttaatgatatacctccaaaagctgtttctggactcgtactg
tccattacagtcccagaaacagatatcgcttttataacacgcgaaaatttgcagtacaca
gactccgaatcaccagacgacgatcttcaatacactataactacaccacctcattttatc
gcaacgcagagtgtcactgatgcaggaaggatttactccgcagctggggtaataatgccg
atgaaagaccaaactatgtcaccgttacaatcgtttcaacaacgtgacatcaatcagaga
acgatagcgtacatgccgccgttcaaagaaattggcccgaacccaagagaagtgcagttt
gtttactcagtctcagatccatttgggaatgttgttgttggcaacgtttttgacatcaca
gtaacgcctgttaatgacaaaccacctgttatttacactaacgatttgacggtaaatgaa
ggtggcgatgtgacgatttcacccacgaagctgtcagtgactgacatggacacactacca
gcagaacttgtgattacattatggaaggagccctctaagggccgtattgtcgtaggtggc
gagaacatgacgattggaggcacttttacaatggaggatattacggcaaatagagtcaga
tatgttcactatgggtcggaagactccactgaccagtttgaaattatcgcatctgatggc
gctcaacaagcatcgcaaactatccacattaccatactgcccatcaacgaccaaatccca
cagcttgttaaaggactcgttacccaggtaaccatacatgaaggcgaagagcttatcata
actcccgatattctgctggctacagatgtcgacacgaacgacatgcttctgcatttcatc
gtcgtcaaaccaccaaaacgaggaatactggttaaaaacggcgttacgacaaccaggttt
agacagatggatatcacagagggatttgtcaagtatagacacgcaagtggagaaacaggc
gatgaaccggtttacgatgaaatcacgttcatcgtttcggataagagcattccgacagcg
gagaatctacccgtgcacgatttgcgaattacaattctcccaattgataaccaagcacca
cggatcgtgttcggtaatccgtattttgtcaacgaaggcagtaaagaagttttcacgctg
gatgtgctcagtgctgtcgatcgtgacacggctctcgacgagttaaccttttatataacg
gagcagccagaatgggggtttgttgagaatatcctacctaaaccaggctttgagaaaagc
aatgctggcaaacctataacattcttcacctttgaacatttacgtgatggttacatcaat
tatgtgcagtctattcacgagggattcgaaccaaggtctgacagcctcatactctatgtg
acagatggacaacattactctgccaatgttacattcattatcaacatcatcccgcaaaac
gatgaaatcccggtcctaaccatacagaatttcactattttcgagaattccttctttaaa
atcaccaccgaatacattgatgcattcgactttgacgtccctatggaaatgcttgtgttt
tccatcgtggaccctccgcaacatggaatgttggtggatcgtgctcttccggagcatgta
agactgcccatatttgatttcaacttgaatcaacttcagaatacgcttaagtttacatac
gaacacgatggatcggaaacgacgcacgaccgatttagcatacgggtcactgacggtaaa
catacggtgagaaaaccgttggatatagaaatcattccggttgatgatatggcaccacgg
atcattaagaacacaggaattactgttagtttgcaagattatcgcgtcatgtccgctgtc
atattacagtccacagatctagacactccggatacgcacctgtattatgtaatcaaatcg
taccctcgtcgaggtgtattgcaacgctatgtagagggcgtatggaaagatttatccaac
ggcgggaattttacccaagaagatctgaacatgaatcttatccgttatttgcatacatcg
gaactcggaagcaaagggttagataggttcaggtttgatgtaacggatggcgtacggaat
acgggcaaagaaagcgttcttattacgataaaaaatacgagaagagagccgttgaggatt
aacaactatggattggaattacgtgaaggcgaacggaagataattcctattgagcagcta
tcggcgtatgataatagcaacaatttagctgaaattcaatttaccgttactactccccct
gctcaaggtcatgtagaaaggataggcaaaatcggatatccagttacggcttttacacag
cttgatttaacggggcagcaaattgtttataaccatctgcgaatagaccaggtacaaaac
gaccagttcacgtttagcgtaacaaatggattacaagtgaaaaacgatactttccatgtc
gtggtgattccgatagacgatcagctgccagttttgacaacaaatgttgcgttaaatgtt
ccgcaaaatggctaccaggtgattaagccaaccaatttggaagcggtcgatcaagacaca
ttttcaacaagagtggagtatgtcatcactcagccaccactctatggacaactattaaag
ggtggactaccaatagaggacactttcactcaagcggatatcgataatggtgatattgtg
tataggcacatgattgagaaagcagcgcaagacgaattctatttcaatgtctttgatgga
actaatgtcggatatgtcgtcaataacttggtgtacaatcaacctttgaggtatgctata
aacattgaattggtcgataattccccaccacggcttgtcgctaaagtaataccaaacaaa
ctagaagttcaaaatggccgctacgcttacacccttagcgacgccttcttacgagcagac
gacgaatgtaatgcagatagtgtggtatactcggttgttgcggaaccgttatttggtcat
tttgaaaatgtagctacgagacgtcgtgtgcagggaaaatttacgcaacaagatgttaat
gataggattatcaagtacatcatgagggattctgcaagagtgactaatgatagcttcacc
tttgacctctgggattgcaatgagaatgctcttagaaaccaaaggtttgaattccgttgg
tcaataatactcttcaaccgtgaggagtttatggtatgcgagacaatggggacgctttcc
atcggtatcctacgtgttggtaatcttctcatgtcatcattcgttggtatagaatcacac
agtcttacagctaaagagggactggactttgcacccaatcgtgctaatcagatccaattt
gaccctggtgtgtcgcaggctgtttggaccgttgatatcataccagatgatctggaggag
aatcgtgagaggtttaaagtgatgctgagtaatccagtcaatgcagtactaggggagtat
gaccaggtcaaagtagtcatcaaagactctaaggatggtgcatgccgtggtgaagaagga
ccagggggtcccaccattacaggaacacagacatgctgtggaccagatggattaccttac
agtccagatggtggaccattgatgcctgaactaccaccgggggtaccacaaccgggtcaa
cctcttctccccggaatgcacccggatgaacaagttcccggtatgccacatctgggtcca
aatggtccgtatcttggaccggtgattccaccgcaagatatgccaatctacaatggtgaa
tattttgagactaccggtggagacgggtttcctcaaggcgtatatccaggtcatggagat
ggacaggatcagccggttttatatccgggacaaccggatggtgaatgctgtccaccagat
gtgtacagtggtccctacccagttccaggtacccagcaacagccaggaccgtatccacaa
ggaagtcaggggtcaggaggtcaaggtggatctaatacacaaaccagcgtgtggaggaat
ggcacacatacgagatggacattccatggtataggatccatgcctaccaatgtacaaagt
cgaggaggcagtagcactaatagtagaactggtagtcaaacaccatcagggggcgctttt
caacacgttccacccggcgatccaaaccagggagcttttgagagcacaggattaagacac
atccctctaagtaaccaggatcgtggaactccagagggcggtatacaccaaaatcaacaa
gaaaatcgacaacagcaacagcatgtttcttctagtggccaatttgccggtgtaccggtc
agtggttttacccaggaatctttgccggtcatttcaggacaaggttcacagcaaggacaa
caaggagtcgatgtgccacatgatacaagttttactacacgctgtaccagagataatagg
ggagagatttatcatgataagcgtacagccaaggtataccagtgtgatggacagacgtgg
agagactgggtggttataggcctacaaggacccaccagacaaccacctgaatcaactggg
tgtcctttaggttggcatggtaacaacgctagatgctacctgatgtcaactatagaaact
acatggaatgaagctcagaggatatgtagagaacaacatgatagtaatttagtgagcatc
agatctaaagcagaacaaaaatggatagcctcattggttgctgggcaatacatatggata
ggtgcaaatgacaagtttgtagagggcaactgggagtggatatctaatgatcctgtgacg
tacacaagatggaagccaggatcaccgcatcttgacgagcaacacaacattaactgtgcc
atggtatcacgaagaatgagatggatggattcatcttgtgaagaaggaactaatttcttt
gtgtgtatgaagccaagtgtttag
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