Amphiura filiformis: 140146215
Help
Entry
140146215 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
afil Amphiura filiformis
Pathway
afil03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140146215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afil03021
]
140146215
Transcription machinery [BR:
afil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
140146215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
140146215
NCBI-ProteinID:
XP_072024099
LinkDB
All DBs
Position
2:40399463..40415745
Genome browser
AA seq
554 aa
AA seq
DB search
MSFKASTSTLPTSKVATPPANKVYTPHTSKAPVVKEYTVKLARDIKKKYNVMQFNRGDKI
DFSKSTKVYMDRENNMREFKSFADEDMPTVGAGSEFGRERREEARRKKYGIISKKYKPDD
QPWLLKVPGKPEKKYRGKKAGLITENANYYLFTQQSDGTFHAIPVDSWYIFQQNIKHATL
NAEEAEEEFTRRDRSFNYFSLMVQKRLKDTGDEGAAAEEEEKKKTKVKTKSLTILEDDDY
RDLMSSDDSSEDSDAGSKGETKKNQSQXSTSETKKKDSGSEAEEESDTGDFEGREFDYLS
EMSSDEEAEEIKTDIKGLDEEMKNMEDEEEEEAEEGENKEEEEKKKEEGGEANKEGDKPG
SKNASDSSGSDSGDSDIDDTKIQSSIFMQKKNTAKKPQSSQKSSSKSSSRGGSRPSTPIT
GSENGAKPSTDNTLSGAAVKLEIPGPGGSLKRPGSAEPRPSKKARTDSPVPSGSKTPTTP
EVGLTEDVVRRYLMRKPMTTKDLLYKLNPKKTGLTSEEVVRRVTMILRKLNPEQRKIKDK
MYWHIKDDSKPASR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaaggcaagtacatccacactacctaccagcaaggtagccacaccgcctgcc
aacaaggtgtacacaccgcataccagtaaagcccctgtagtgaaggagtacacagtcaaa
ttagccagagatatcaagaagaaatacaatgtgatgcagttcaacagaggagataagata
gatttctctaaaagtacaaaggtttatatggacagagagaataatatgcgtgaatttaaa
tctttcgctgatgaggacatgccgacagtaggagcagggagtgaatttggtagggagagg
agagaggaagctagacggaaaaaatacggaatcatctcaaaaaaatacaagccagatgat
caaccatggttgctaaaagtcccaggaaaaccagagaaaaagtaccgtggcaaaaaggct
ggcttaattacagaaaatgctaactattacctattcacacaacaatcagacgggacattc
catgctataccggtagactcatggtatatattccaacaaaatataaagcatgctacattg
aatgcagaggaggctgaggaggagtttaccaggagagacagatccttcaattactttagt
ctcatggtgcaaaaacgattaaaggacacaggtgatgagggcgccgctgcagaggaagag
gagaaaaagaagacgaaagtaaagacaaaatcactgacgattttagaagatgatgattat
cgcgacttaatgtcatcagatgatagctcagaagatagcgacgcaggatcaaaaggtgag
accaaaaaaaatcagtcacagtaaagcaccagcgagaccaaaaagaaagattcaggttca
gaagcagaagaagagagcgataccggtgattttgaaggcagggaatttgattatctgtca
gaaatgtcaagcgatgaagaagcagaagaaatcaagacggacatcaaaggtttggatgaa
gaaatgaagaacatggaggacgaagaagaggaagaagcagaggaaggagagaataaagag
gaggaggagaagaagaaggaagaaggaggagaggctaataaggaaggagacaagcctggc
agtaaaaatgcaagtgattccagtggatcagattctggagatagtgatattgacgatacc
aaaatacaatcatctatttttatgcagaaaaagaatacagcaaagaaacctcagtcatca
cagaaatcgtcatccaagagttcaagtaggggagggagccgtcccagtacaccaatcaca
ggcagtgaaaatggcgctaaacctagtacagataatacattatcaggtgcggctgtcaaa
ttagaaataccaggaccaggaggaagcttgaagagacctggatctgcagagccccgccca
tccaagaaagccagaacggacagcccagtaccatcaggatcaaaaacacctactacaccg
gaggtgggtttaacagaagatgtcgtgagaagatacttgatgaggaaacctatgacaacc
aaagacttgttatataaattaaatccaaagaaaacgggtctcacctctgaggaggtcgtc
agacgggtcaccatgattttacgcaaactgaatccagagcagagaaaaattaaggacaaa
atgtattggcatattaaagatgacagtaaacctgctagccgataa
DBGET
integrated database retrieval system
