KEGG   Amphiura filiformis: 140146253
Entry
140146253         CDS       T10871                                 
Name
(RefSeq) retinoblastoma-like protein 1
  KO
K04681  retinoblastoma-like protein 1
Organism
afil  Amphiura filiformis
Pathway
afil04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:afil00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    140146253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afil03000]
    140146253
Transcription factors [BR:afil03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    140146253
SSDB
Motif
Pfam: RB_A RB_B DUF3452 TFIIB
Other DBs
NCBI-GeneID: 140146253
NCBI-ProteinID: XP_072024135
LinkDB
Position
2:43732518..43764615
AA seq 1133 aa
MASKELAENRQKRERFNEFCSILNLDASTGEEAWRNYERISVNYTLEGDDLHWLACALYV
ACRERVLPTVGNGTVEGNCISLTVLLRTAKLSVIQFFNKMKKWSDMANLPQQFRDKVDRL
ERNFAVSTVIFKKYKPIFLDIFKSVTDEIPKVPRGRKQRRLPCTCSDVFKFCWTLFVSVK
GNFPAISDDLVNSYHLLLCCLDLVFANAILANKKDLLNFNFPGLPENFTSRDYRVPHEAP
CSIEKLCELHDGLVIEAKGIKQHWWKPHVKKLFERKTIRGTIEKLSGLLDVQNFEVNSKS
INYDYEEYVLTRGDFDERIFLGQDADEEIGTPHKLENIALDAGSITDKMQAKRNTLQQEL
NKPKSLAPSTPLTNRRYLKEKDPSVTPVSTATQTVSRLQALLTGRKMGPSEELLVIFGEC
KENPVESISKRVKEMGEVFVQKYTQPSGDESGSHVDFAKRRLTLAASLYYKCMESIMKSE
KKRKQGKVDLACLLDHDMFHKSLFACCLEVIIFAYNSQRTFPWVIECFDIPAFHYYKVIE
LLLRAEEGLSRDIVKHLNHVEEDVLQEYAWRHESPLWDVLKEDGHGGPSCEDVSLPHQTD
KPGSMMLSRMASSPLPLHPRVRQLVTTAGEPKVSKKDELLQSPTSAGDRFSSPSPGSGAK
RRLFSHTPAEANEASSGTPDSGEASKPSESSASAALKAVAEQASASAAVSAAAPPTSTSS
TSGKPPQIRLATVSQRSNVPTQRITVAVQSVKDKDGTVRYIASPVKTVKIYTTVVSPNKG
SPVKLKLTTDQGASSGASGSGETHAPPPAPKAKKTGSLGLFFRKVYHLINVRLLDLCTRL
NIEESLRRKIWTCMEHSIVKHVELMKDRHLDQLIMCAIYVVCKVTKKDQQFQEIMKCYRR
QPQAKSHVYRSVLLRSRKRHSSDESSDSSQNSQAGSPDLEKKEANRNPHQIRSASTLPGN
LSNSCPPTPTKMAGTCSTFEDEDRGDLIMFYNLVYVKKMQGFALRFSPPSDGSTDLSSAP
TLSPMPVVRPHQTSPRKVSSKHKVYISSHSDSTVHSPTKGNMMYYIQKSPAKSLKDINNM
IKTGDRNKRALSMDGGMDNPPIKRFKLGETGATSLELRLQQIQAARKVANGDA
NT seq 3402 nt   +upstreamnt  +downstreamnt
atggcgtccaaggaactggcagaaaaccgccagaaaagggaaagatttaatgaattttgc
tccattcttaatttagacgcatcaactggtgaagaagcttggcgtaattacgagcggatc
tcagtaaattatacacttgagggcgatgatttacattggttggcctgtgcactctacgta
gcatgtcgcgaaagggtactgccaacagtcggaaatggaacagtggaagggaactgtatt
tcccttacagtcctgctcagaaccgcaaaactcagtgttattcagtttttcaacaagatg
aaaaaatggtccgacatggccaacttgccacagcaattccgagacaaagtagatcgtcta
gagagaaattttgcagtctccacggtcattttcaagaaatacaaacccattttcttggat
attttcaaaagtgtgacagatgagatacccaaggtgccacgtggacgcaaacaaaggaga
ctcccttgcacatgttcagatgttttcaagttttgttggacgctctttgtgtctgtcaaa
ggtaattttccagcaatcagtgatgatctggtgaattcctaccatttactgctgtgttgt
ctggatttagtctttgcaaatgcgatacttgccaacaaaaaagatctactcaatttcaac
tttccaggtcttcccgaaaacttcaccagtcgtgattatcgtgtcccccacgaggctccg
tgctccatagagaaactgtgtgaattacatgatggcctggtcatagaagccaagggaatc
aaacagcactggtggaaaccacatgtcaagaaattatttgaaagaaagaccataagaggc
accattgaaaagttgagtggacttcttgatgtgcagaattttgaagtcaatagcaagagt
atcaattatgactatgaggagtatgtgttgacgaggggagacttcgatgagcgcatcttt
ttaggtcaagatgctgatgaagagatcggaactccgcataaattagaaaacatcgccttg
gacgccggatccatcacagacaagatgcaagcaaagaggaatacattacagcaggagcta
aacaagcctaagagcctagccccttccacaccacttaccaacaggagatacctcaaagaa
aaggacccaagtgtcactccagtttccacagcaacgcagacagtaagtcgactgcaggcg
ttactgaccggacgcaagatgggtccgagcgaggagctattggtcatctttggggagtgt
aaggagaatccggtggagtcaatttctaagcgagtcaaggagatgggagaggtgtttgtg
cagaaatatacacagccctctggtgatgagtcgggttcacatgtggattttgctaagcga
agacttacattagcagctagcctgtattacaagtgtatggagagtattatgaagtccgag
aagaagagaaaacaaggaaaagtggacttggcctgccttctggaccatgacatgtttcac
aaatcactctttgcttgttgtttggaggtcatcatatttgcctataactcacaaaggaca
tttccttgggtaatagaatgcttcgatatcccagcattccactactacaaggtcattgaa
cttttactgagggcagaagaaggtctatcgagggacattgtgaaacacctgaaccatgtt
gaagaagacgttctccaggagtatgcttggcgtcatgaatcgccattatgggatgttctc
aaggaagacggtcatggcggtccatcttgtgaagatgtgtcattgcctcaccagacagat
aaaccagggagtatgatgttatctcgcatggcgtcatcacccttaccattgcatccacgg
gtgaggcagcttgtgactacggcaggggagccaaaagtatccaaaaaagatgagctattg
caatcacctacatcagctggagatcgtttcagttccccatccccaggaagtggtgccaag
aggagacttttctcacacactcctgcagaagcaaatgaagccagctcaggtacccccgac
tcaggtgaggccagtaaacctagtgagagttcagcatcagcggccctcaaagcagtggca
gagcaggctagtgcaagtgctgctgtatcagcggcggcacctccaacatcaactagtagc
acatcaggaaaaccaccccagatccgtctagcgacagtgtcacagaggagcaatgtccct
acacaaagaattactgtggctgttcagagtgtcaaggacaaagatggcactgtccgatat
attgcaagtccagtgaagacagtcaaaatctacacaacagtcgtatctccaaacaaagga
tcaccagttaaactcaagctgaccactgaccaaggagcgtcatcaggagctagtggtagt
ggggaaacgcatgcaccacctccagccccgaaagcaaagaagacgggatcattgggactg
tttttcagaaaggtctatcaccttatcaatgtgcgtctactagacttgtgtacaaggctg
aacatagaggaatccctgaggcgtaagatatggacctgtatggagcattcaatagtcaaa
catgtcgagttgatgaaggatagacatttagatcagctgataatgtgtgcaatttatgtg
gtctgcaaggtcacaaagaaagatcaacagttccaggaaatcatgaaatgttaccgcaga
caacctcaagccaagagtcatgtgtataggagtgttttgctgagaagtcgtaagcgtcac
agctcagatgagagctcggatagttcgcagaatagccaggcaggatcacctgatctagag
aaaaaagaggccaatcgtaaccctcatcagatccgttctgctagcactttaccaggaaac
ctgtccaatagttgtccaccaacgccaactaaaatggcagggacctgctcaacatttgag
gatgaagacaggggtgacctcatcatgttctataacttggtgtatgtgaagaagatgcaa
ggttttgcattgcgcttttccccaccaagtgatggttccacagacctctctagcgccccc
accctctcccccatgccagtcgtcagacctcatcagacgtctccaaggaaggtatcgagt
aaacacaaggtgtacatatcgtcacatagtgatagtacggtgcatagtcctactaaggga
aacatgatgtactatattcagaagagtcctgccaagtcactcaaggacatcaacaacatg
atcaagactggagacagaaacaaaagagcattgtccatggatggaggcatggataatcca
cccatcaaaagatttaaactcggtgaaacgggcgccaccagcttggagcttcgtcttcaa
caaatccaggctgctcgcaaagtcgcaaacggggatgcgtga

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