Amphiura filiformis: 140146253
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Entry
140146253 CDS
T10871
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
afil Amphiura filiformis
Pathway
afil04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
140146253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afil03000
]
140146253
Transcription factors [BR:
afil03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
140146253
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
140146253
NCBI-ProteinID:
XP_072024135
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Position
2:43732518..43764615
Genome browser
AA seq
1133 aa
AA seq
DB search
MASKELAENRQKRERFNEFCSILNLDASTGEEAWRNYERISVNYTLEGDDLHWLACALYV
ACRERVLPTVGNGTVEGNCISLTVLLRTAKLSVIQFFNKMKKWSDMANLPQQFRDKVDRL
ERNFAVSTVIFKKYKPIFLDIFKSVTDEIPKVPRGRKQRRLPCTCSDVFKFCWTLFVSVK
GNFPAISDDLVNSYHLLLCCLDLVFANAILANKKDLLNFNFPGLPENFTSRDYRVPHEAP
CSIEKLCELHDGLVIEAKGIKQHWWKPHVKKLFERKTIRGTIEKLSGLLDVQNFEVNSKS
INYDYEEYVLTRGDFDERIFLGQDADEEIGTPHKLENIALDAGSITDKMQAKRNTLQQEL
NKPKSLAPSTPLTNRRYLKEKDPSVTPVSTATQTVSRLQALLTGRKMGPSEELLVIFGEC
KENPVESISKRVKEMGEVFVQKYTQPSGDESGSHVDFAKRRLTLAASLYYKCMESIMKSE
KKRKQGKVDLACLLDHDMFHKSLFACCLEVIIFAYNSQRTFPWVIECFDIPAFHYYKVIE
LLLRAEEGLSRDIVKHLNHVEEDVLQEYAWRHESPLWDVLKEDGHGGPSCEDVSLPHQTD
KPGSMMLSRMASSPLPLHPRVRQLVTTAGEPKVSKKDELLQSPTSAGDRFSSPSPGSGAK
RRLFSHTPAEANEASSGTPDSGEASKPSESSASAALKAVAEQASASAAVSAAAPPTSTSS
TSGKPPQIRLATVSQRSNVPTQRITVAVQSVKDKDGTVRYIASPVKTVKIYTTVVSPNKG
SPVKLKLTTDQGASSGASGSGETHAPPPAPKAKKTGSLGLFFRKVYHLINVRLLDLCTRL
NIEESLRRKIWTCMEHSIVKHVELMKDRHLDQLIMCAIYVVCKVTKKDQQFQEIMKCYRR
QPQAKSHVYRSVLLRSRKRHSSDESSDSSQNSQAGSPDLEKKEANRNPHQIRSASTLPGN
LSNSCPPTPTKMAGTCSTFEDEDRGDLIMFYNLVYVKKMQGFALRFSPPSDGSTDLSSAP
TLSPMPVVRPHQTSPRKVSSKHKVYISSHSDSTVHSPTKGNMMYYIQKSPAKSLKDINNM
IKTGDRNKRALSMDGGMDNPPIKRFKLGETGATSLELRLQQIQAARKVANGDA
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaaggaactggcagaaaaccgccagaaaagggaaagatttaatgaattttgc
tccattcttaatttagacgcatcaactggtgaagaagcttggcgtaattacgagcggatc
tcagtaaattatacacttgagggcgatgatttacattggttggcctgtgcactctacgta
gcatgtcgcgaaagggtactgccaacagtcggaaatggaacagtggaagggaactgtatt
tcccttacagtcctgctcagaaccgcaaaactcagtgttattcagtttttcaacaagatg
aaaaaatggtccgacatggccaacttgccacagcaattccgagacaaagtagatcgtcta
gagagaaattttgcagtctccacggtcattttcaagaaatacaaacccattttcttggat
attttcaaaagtgtgacagatgagatacccaaggtgccacgtggacgcaaacaaaggaga
ctcccttgcacatgttcagatgttttcaagttttgttggacgctctttgtgtctgtcaaa
ggtaattttccagcaatcagtgatgatctggtgaattcctaccatttactgctgtgttgt
ctggatttagtctttgcaaatgcgatacttgccaacaaaaaagatctactcaatttcaac
tttccaggtcttcccgaaaacttcaccagtcgtgattatcgtgtcccccacgaggctccg
tgctccatagagaaactgtgtgaattacatgatggcctggtcatagaagccaagggaatc
aaacagcactggtggaaaccacatgtcaagaaattatttgaaagaaagaccataagaggc
accattgaaaagttgagtggacttcttgatgtgcagaattttgaagtcaatagcaagagt
atcaattatgactatgaggagtatgtgttgacgaggggagacttcgatgagcgcatcttt
ttaggtcaagatgctgatgaagagatcggaactccgcataaattagaaaacatcgccttg
gacgccggatccatcacagacaagatgcaagcaaagaggaatacattacagcaggagcta
aacaagcctaagagcctagccccttccacaccacttaccaacaggagatacctcaaagaa
aaggacccaagtgtcactccagtttccacagcaacgcagacagtaagtcgactgcaggcg
ttactgaccggacgcaagatgggtccgagcgaggagctattggtcatctttggggagtgt
aaggagaatccggtggagtcaatttctaagcgagtcaaggagatgggagaggtgtttgtg
cagaaatatacacagccctctggtgatgagtcgggttcacatgtggattttgctaagcga
agacttacattagcagctagcctgtattacaagtgtatggagagtattatgaagtccgag
aagaagagaaaacaaggaaaagtggacttggcctgccttctggaccatgacatgtttcac
aaatcactctttgcttgttgtttggaggtcatcatatttgcctataactcacaaaggaca
tttccttgggtaatagaatgcttcgatatcccagcattccactactacaaggtcattgaa
cttttactgagggcagaagaaggtctatcgagggacattgtgaaacacctgaaccatgtt
gaagaagacgttctccaggagtatgcttggcgtcatgaatcgccattatgggatgttctc
aaggaagacggtcatggcggtccatcttgtgaagatgtgtcattgcctcaccagacagat
aaaccagggagtatgatgttatctcgcatggcgtcatcacccttaccattgcatccacgg
gtgaggcagcttgtgactacggcaggggagccaaaagtatccaaaaaagatgagctattg
caatcacctacatcagctggagatcgtttcagttccccatccccaggaagtggtgccaag
aggagacttttctcacacactcctgcagaagcaaatgaagccagctcaggtacccccgac
tcaggtgaggccagtaaacctagtgagagttcagcatcagcggccctcaaagcagtggca
gagcaggctagtgcaagtgctgctgtatcagcggcggcacctccaacatcaactagtagc
acatcaggaaaaccaccccagatccgtctagcgacagtgtcacagaggagcaatgtccct
acacaaagaattactgtggctgttcagagtgtcaaggacaaagatggcactgtccgatat
attgcaagtccagtgaagacagtcaaaatctacacaacagtcgtatctccaaacaaagga
tcaccagttaaactcaagctgaccactgaccaaggagcgtcatcaggagctagtggtagt
ggggaaacgcatgcaccacctccagccccgaaagcaaagaagacgggatcattgggactg
tttttcagaaaggtctatcaccttatcaatgtgcgtctactagacttgtgtacaaggctg
aacatagaggaatccctgaggcgtaagatatggacctgtatggagcattcaatagtcaaa
catgtcgagttgatgaaggatagacatttagatcagctgataatgtgtgcaatttatgtg
gtctgcaaggtcacaaagaaagatcaacagttccaggaaatcatgaaatgttaccgcaga
caacctcaagccaagagtcatgtgtataggagtgttttgctgagaagtcgtaagcgtcac
agctcagatgagagctcggatagttcgcagaatagccaggcaggatcacctgatctagag
aaaaaagaggccaatcgtaaccctcatcagatccgttctgctagcactttaccaggaaac
ctgtccaatagttgtccaccaacgccaactaaaatggcagggacctgctcaacatttgag
gatgaagacaggggtgacctcatcatgttctataacttggtgtatgtgaagaagatgcaa
ggttttgcattgcgcttttccccaccaagtgatggttccacagacctctctagcgccccc
accctctcccccatgccagtcgtcagacctcatcagacgtctccaaggaaggtatcgagt
aaacacaaggtgtacatatcgtcacatagtgatagtacggtgcatagtcctactaaggga
aacatgatgtactatattcagaagagtcctgccaagtcactcaaggacatcaacaacatg
atcaagactggagacagaaacaaaagagcattgtccatggatggaggcatggataatcca
cccatcaaaagatttaaactcggtgaaacgggcgccaccagcttggagcttcgtcttcaa
caaatccaggctgctcgcaaagtcgcaaacggggatgcgtga
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