Amphiura filiformis: 140146425
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Entry
140146425 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
afil Amphiura filiformis
Pathway
afil04144
Endocytosis
Brite
Membrane trafficking [BR:
afil04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140146425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140146425
NCBI-ProteinID:
XP_072024370
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Position
2:complement(56823591..56880526)
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AA seq
797 aa
AA seq
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MPQTQLSPMEEQEKLLDDAQQVVKVQSFQMKRCLDKGKLMDGLKHASNMLGELRTSLLSP
KSYYELYMQVCDELRYLEQYLLDEYQKGHRISDLYELVQYAGNIVPRLYLLITVGIVYIK
TSQHSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDCEQEENENKSGVVEDSI
DFILLNFGEMNKLWVRMQHQGHTRHKEKREKERMELRILVGTNLVRLSQLETIDQERFQK
VVLPDVLEQAVSCKDYIAQEYLMECIIQVFPDEFHLQTLNQFLKACADVCPEVNVKNIII
ALIDRLALFACRDDTAGIPQELKLFDIFSQQIAAVIQAREDMATEDVVALQVSLINLALK
CYPDRVDYIDKVLETTSEIFNKLKIEPSSLIHNTAVAKELSRMLKIPIDNYNNVLTLLEL
KHFGPLFDYFDYEGRKNMSLYVINNALDNGTQIPLQDQVDQVLTLVATLVQDQSDQPEEE
DQEDFAEEQGLMGRFINLLLADNADQQYLILNAARKHFGSGGNKRIKYTLPPLVFGAFRL
AFQYKDLADEDDKWEKKCQKIFTFCHQTISALIKAELAELPLRLFLQGALAAGQIAYENH
ETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIATFEQMSCFGEENHEPLRTQCAXRRLK
LLKKPDQCRGVGVCSHLFWSGRTVESEGKEIKDCKRVVECLKKALRIAKQCMDPTVQVQL
FVEIFNRYVYFYEKGNDQVNVAILNQLIEKVREDLPNLEDNEETEQINKHFTNTLEHLRN
KQESDESDGPSYEGLTL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagacacagctatcaccgatggaggagcaggagaaactccttgacgacgcacag
caggtcgtcaaggtgcagtcctttcagatgaaaagatgtttggacaaaggaaaacttatg
gatggactgaaacatgcctccaatatgctgggagaactccgtacatctctgctatcgccc
aagagctactatgagctgtacatgcaggtatgtgatgagttgcgatacctggagcagtat
cttctagatgagtaccagaagggtcaccgcatatctgacctgtatgagttggtacagtat
gccggcaacatcgtaccgagattgtacctgctcatcacggttggcattgtgtacatcaag
accagccaacactcacgtaaggatatccttaaggacctggttgagatgtgtcggggcgtc
cagcatcccctgagaggactgttcttacgtaactacctcttgcaatgcacacgcaacatc
ctgcctgactgtgaacaagaggaaaatgaaaacaagtcgggagtggtagaagactccatc
gacttcatcctgctcaactttggtgagatgaacaagctatgggtgcgtatgcagcaccag
ggccacaccagacacaaggagaagagggagaaggagcggatggagctgagaattcttgtg
ggcaccaacctggtgcgtctcagtcagctggagaccatcgaccaggaacgctttcaaaag
gtagtattacccgatgtgttggagcaggctgtgagctgtaaggactacatagcccaggag
tacctgatggagtgcatcatacaagtgttcccagatgaattccatcttcagacactcaat
caattcctgaaagcttgcgctgacgtgtgtccagaagtcaacgtcaagaatatcatcata
gcacttatcgataggttggcactgttcgcttgtcgagacgacactgcaggcattccacaa
gaactcaaactttttgacatattttcacagcagattgctgcagtaatacaggcccgtgaa
gacatggcaacagaagacgttgtagccctccaagtgtccctcataaatttggccctcaaa
tgttaccccgacagagtggattacatagacaaagttttggaaaccacctcagaaattttc
aataaacttaaaattgaaccgtcgagccttatacacaatacggccgtggcaaaagaatta
tcgcgtatgctcaagataccaatcgataattataacaacgttttaacgcttttggagctg
aagcactttggccctctttttgattattttgactacgagggacgcaaaaacatgagcctt
tacgtgataaacaatgcgctagataatggtacgcaaattccgctgcaggatcaggtggac
caagttctgacgctggtggcgacacttgtgcaggaccagagcgaccaacccgaagaggag
gaccaagaagattttgctgaagagcaagggctgatgggaaggttcattaatctcctcttg
gctgacaatgctgatcaacaatatctgattttgaatgcagctcgtaaacattttggaagt
ggtggaaacaagcgtataaaatatacccttcctcctttggtgtttggtgcattccgtctt
gcattccagtacaaggatctggctgatgaggatgacaagtgggagaaaaaatgccagaaa
attttcacgttttgtcaccaaacgatcagtgcgctgatcaaagctgagttagcagagttg
cctctacgacttttcctccagggggcgctcgctgcaggacaaattgcatacgaaaatcat
gaaacggttgcttacgaattcatgtcacaggctttctccctatatgaagatgagattagt
gactctaaagcccaactggcggccattactctcatcatagccacattcgagcagatgtcc
tgttttggagaggagaaccacgagccactgcgcacccaatgtgccnntcgccgcctcaag
ctgctgaagaaaccagatcagtgtcgtggggttggcgtgtgctcgcatctcttctggtcg
gggagaacggtagagagtgaaggcaaggagatcaaggactgcaagcgtgtagtggagtgt
ctgaagaaagctctgcgtatcgctaagcagtgtatggacccaacagtacaggtgcaactc
tttgttgaaatattcaaccgctatgtttacttctatgagaagggaaatgaccaggtgaat
gtagctatcctgaaccaacttattgaaaaagtacgtgaagacttgcctaacctggaagac
aacgaggaaacggaacagatcaacaaacatttcaccaacacgctggaacatctgaggaat
aaacaggaatcggacgaatctgacggaccatcctatgaagggctgactttgtaa
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