Amphiura filiformis: 140146429
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Entry
140146429 CDS
T10871
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
afil Amphiura filiformis
Pathway
afil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140146429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140146429
03110 Chaperones and folding catalysts [BR:
afil03110
]
140146429
04121 Ubiquitin system [BR:
afil04121
]
140146429
Enzymes [BR:
afil01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
140146429
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140146429
Complex C
U4/U6.U5 tri-SnRNP related factors
140146429
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
140146429
Chaperones and folding catalysts [BR:
afil03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
140146429
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
U-box type E3
140146429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
zf-Nse
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
140146429
NCBI-ProteinID:
XP_072024376
LinkDB
All DBs
Position
2:complement(57037716..57069915)
Genome browser
AA seq
530 aa
AA seq
DB search
MGKRQHQSDKMYLTSKEWATLFGGKKADKGGKSDFKRLPFDHCSLSLQPFEHPYCTKDGV
MFDLVHIVPYLKKFKTNPITGEPMDAKSLVKLNFHKNSNGKYHCPVTFKVFTNNSHIVAV
KTTGNVFAYEAVEELNIKTKNWKELLTDETFVRKDLIVLQDPTNVEKFNITQFHHVQNNI
KVQTEAEKKAKAGASYYMNATNSTARDALSELYRDYKPADKKEEDKPKADTLNAAHYSTG
MVAAGFTSTAMTPETAHESAIIDEDIIRYERVKKKGYVRLVTNKGVLNVELHCDMVPTTC
ENFMKLCVNGYYKGTKFHRSIKNFMIQGGDPTATGTGGESAWGKTFKDEFKPNLSHTGRG
ILSMANSGPDTNKSQFFITFRSCKHLDGKHSVFGRVVGGLDTIQAMESVETDKKTDKPKE
DIVIQDTLVFVNPYDEVDEEIAKERQQKKDEAEAKLKAPPAKSSAVTLSSEDKPTVYRSG
IGKYISKASKEDSPSTSKRPSDQEEPNKETYVSQKKKAKSTHKLTDFSAW
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacgacaacatcagtccgataaaatgtatctgacctccaaggaatgggccacc
ttgtttggaggaaagaaggcagataaaggaggtaaatcagatttcaagaggctgcctttt
gaccattgtagcttatctttgcagccttttgagcatccgtactgcaccaaagatggtgtt
atgtttgacttggttcatattgtgccttatcttaagaaattcaagaccaatcctattaca
ggagagcctatggatgctaaatctctggtcaagttgaacttccacaaaaattccaacggt
aaataccactgtccagtgacattcaaagtgttcaccaataactcccacatagtagcggtc
aagactacaggcaatgtatttgcgtatgaggcagttgaggagctaaatatcaagactaag
aattggaaagagctattgacagatgagacgtttgtaaggaaagacttaatagtgctacag
gacccaaccaatgtggaaaagttcaatatcacacagtttcatcatgtacaaaataacatt
aaagtacagacagaagcggagaagaaagctaaagcaggggcaagttattatatgaatgca
acaaattctactgctagggatgcattgtcagagctctatagggactacaaacctgctgat
aaaaaagaagaagacaaaccaaaagcagacactctgaatgcagctcattacagtactggc
atggtggcagctggattcacatcaactgctatgacccctgagacagctcatgaatcagca
attattgatgaggatatcatacgctacgagagagtgaaaaagaaaggctatgtcagactt
gtgactaacaaaggtgtactcaatgtagagttacattgtgacatggtgcctacaacttgt
gaaaactttatgaagctttgtgtaaatggttactacaaagggaccaagtttcatagatct
attaagaatttcatgatacaaggtggtgatccaacagcaacaggcaccggaggtgaatca
gcatgggggaagaccttcaaagatgaatttaaacctaatttgtctcacacaggcagaggt
atactaagcatggcaaactcagggcctgataccaataaatcacaatttttcatcacattt
agatcatgtaaacatcttgatggaaaacattctgtgtttggaagggttgttggagggtta
gatacaatacaagctatggagagtgtggagacagacaaaaagacagacaaaccaaaagag
gacattgtgattcaagacacgttggtatttgttaacccctatgatgaagtagatgaagag
atcgcaaaggaaagacagcagaagaaagatgaagcagaagctaaactgaaagcgccccct
gccaagtcgtcggctgtgacattaagttcagaagacaaacctacagtgtatagatcaggg
atagggaaatatatatcaaaagcatccaaggaagacagtccaagcacaagtaaacgacca
tcagaccaagaagagcccaacaaagaaacctatgtatcacagaagaagaaagcaaaatct
actcataaacttacagacttcagtgcctggtag
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