Amphiura filiformis: 140146444
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Entry
140146444 CDS
T10871
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afil03036
]
140146444
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afil04812
]
140146444
Chromosome and associated proteins [BR:
afil03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
140146444
Cytoskeleton proteins [BR:
afil04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
140146444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EF3_N
TOR1L1_N
Cnd1
HEAT_2
HEAT_EZ
RTP1_C1
PDS5
HEAT_DAAF5
Adaptin_N
HEAT_GCN1
Sec7-like_HUS
UTP20
GNC1_N
Xpo1
Motif
Other DBs
NCBI-GeneID:
140146444
NCBI-ProteinID:
XP_072024404
LinkDB
All DBs
Position
1:complement(36656781..36837888)
Genome browser
AA seq
1563 aa
AA seq
DB search
MAERTLDDIANDVMKPDTVSRLNAAQELQDYLQDTSKPVYCENFDRLVDDLASWVNSSNF
KISLAGLECLTSLVHRQGDKFKTHVGTVLPATLDRLGDGKDQVREQAQTLIQILMDPASS
PQYVFERLMKAFSHKGWRVREEVLLCLMQTINTFGAGSLTLNKIVPSICKLLGDPNSQVR
DTAINTLVEIYRHVGEKVRIDLGKKGIPSSRLSIIYAKFDEVKKSGRMLVTPADNAPKPV
TGGDETDSKISLWNTKVKSAIPKTTAVSSLVEPKPAKASTDYDKEGGVTQKAKRVSSTTT
PRKISSSSRPSTAAMSRANGGRSTSQAGAVHEDLFAAAFEDVPSVSIYGSKALEDDFHKI
HNILNDDKQDWEVRCNNLKRIRSLVVAGATEHDCFLTSLRQLEDSLTHSVKDLRSQVVLE
ACITLAFLSQKLGRQFDHAAEALLPNLFLLIQNSAKVMATSGTVCIEIILRNTHASRLIP
IVKTNLSSKSIPIRKQTSRFLLTILSEWETHQLEKNSTVLAESLRKGIEDPDSEVRAVSR
KAFWKFSDHFKQQADKLFTTLDASKQKMLEGELSGSSSSGSLNTTTRLTRKARSNSNSTE
NLSRGNSSQKPRRSVAAARGVGATESDGGGAPTRLGQRSSSEVNLAAASRARSRYASGGN
RSTSASVRIPRSKSTSRENLATRRKRRGLQPPGRFSLNIDPSSDVEEKDSQSMTPGRSGM
ATSMSNGRSRNRSRIGVSQSQPSSRSSSRSSSPSATARAAAIGINGTSRHRRKSGIPVPR
SQGASREASPSRFGFGKSSRDRRHSGSAMGAQREPLSQNQIMAQRVLTTGCDAELALADA
LNKANRRRWNSEFSDDESDASSVCSVGSYGSGPGRALEVRLADVPEVLAKMASPAWSERK
EGLFGLQIVLQSSRVLSRAEIKRVTELFTRMFADPHSKVFSLFLETLSEFVAVHKTDLSD
WLFVLITRLLQKMGCDLLGSVLQKVQRALDVVRESFPYDQQFRILTRFIVDQTQTPNAKV
KIALLRFMESLTELMDPGDFSNSSETRLAVSRIISWMKEAKNSEVRRCSQSVLIALFELN
TPEFSMMLSVLPKSFQDGATKLLHNHLRNATSIDNETSAADLQMKKSPRSYLRVTSPRSN
DSSPRGSYASNGPPEFDTENMNSEDIYDSLRRTTAEIQSYMSSSRDDLDGIYKDGHRVDS
DEVSADSGLMDSMPDIRVDSPDGKVKEYLEFQPQSQTPPQLLQQPQTNGKSAHNGGGSQP
PPYLPTAAQTPTPSEPNPNSNSSYNPTNYQNNNGLTETMNRLALQDAAYEDEQFHEDDQG
DALVPLLTELSNHNERFEERRTAMMQLIKMTRTESLTMWDDHFKTVLLLMLETLGDVEPS
IRAMALRVLREILRNQPDRFKDYAELTILKILEAHKDQQSEVVRAAEETSATLANSLAPD
QSVRVLCPIIQTAEVPVNQAAIKMLTKVVEIMSQAEISEIMEELIPVLLKSYDHAESSIR
KASVFCLVAIHGVIGEQLKLYLSDLAGSKMKLLNLYIKRAQAERAGQPASHSPSSPSLST
GSR
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagaactcttgatgacatcgctaatgatgtcatgaaaccagacacagtctct
cgtctgaatgctgcacaagaactacaggactatttacaggacacatccaaaccagtttac
tgtgagaactttgaccgattggtggatgatctggcttcatgggttaacagtagtaatttt
aagatatcactagctggtctagaatgtctcacatcccttgtacacagacaaggagataaa
ttcaaaacccacgttggaacagtactgcctgccacacttgacagactaggagatggaaag
gatcaggtgcgagagcaggcccagactctaatacaaattttgatggacccagcttcatca
ccacagtatgtctttgagcgtctgatgaaggccttctcacataaaggatggcgagtaagg
gaggaagtactactatgtctgatgcagacaataaatacatttggggctggttccctgaca
ctaaacaagatagtaccttcaatttgcaaactactaggagatccaaacagccaggttagg
gatacagctatcaatacattagtagaaatctataggcatgttggtgaaaaggttcgcatt
gatttaggaaagaaaggaattccatcatcgagattatcaataatctatgcaaagtttgat
gaggtcaagaaatcaggaagaatgttggttacacctgctgacaatgcacccaaaccagtg
actggtggggatgagacagacagtaagatttccctatggaataccaaagtgaaaagcgcc
atccccaaaacgactgctgtcagtagcttagtggagcctaaaccagctaaagcatctaca
gattatgacaaagagggtggtgttacacagaaggcaaaacgggtcagcagcacaactaca
cctaggaaaatatctagcagtagcagaccaagtacagcagcaatgtcaagggctaatggg
ggcagatctactagtcaagctggtgccgtacatgaagatctatttgcagctgcatttgag
gatgttcctagtgtcagtatatatggttctaaggctttagaagatgactttcataaaatt
cataatattctgaatgacgataaacaggattgggaagttagatgtaataatcttaagaga
attcgtagtttagtggttgcaggagcaacggaacatgattgtttcttgacgtcgttgaga
caattagaggattcgttaacacattcagtcaaagatcttaggtcacaggtagtactagaa
gcctgcatcacattagcgtttttatcacagaaattagggcgtcaatttgaccatgcagca
gaggcgttgcttcctaatctctttttactcattcaaaatagcgccaaagtcatggctacg
tcagggactgtgtgcatagaaattatacttaggaacactcacgcttcgagattgatacct
atagtgaagacaaatttgagttccaaatcaatacctattagaaaacaaacaagtaggttt
ttattgacaatactgtctgaatgggaaacgcatcagttagaaaagaattccactgttcta
gcagagtccttacggaaaggtatagaagatccggattcagaagtcagggctgtatccaga
aaagcattctggaagttttctgaccatttcaagcaacaagcagacaagttattcaccact
cttgatgccagtaaacagaaaatgttggaaggagaattgagtggctcatcaagctctggt
tctctcaacacaacaacgagactaacgaggaaggcaaggtcaaattcaaattcaacagaa
aatctaagtcgaggcaactcatcacaaaaaccaaggaggtcagtagctgcagccagaggt
gtaggagcaactgaatcagatggaggaggagcacctacacgccttggccagcgctccagt
agcgaggtcaatctagctgcagcatccagggcacgctctcgttacgcatcaggagggaat
cgatctaccagtgcatcggtcaggatacctaggtctaaatctacatctagggaaaatctg
gcaacaagacggaaaagaagaggtctccaaccacctggtcgtttttccctaaacattgac
cccagctctgatgtggaagaaaaagatagccaatccatgaccccaggcaggtcagggatg
gcaacttcaatgtctaatggaagatctaggaatagaagtaggataggtgtatcacagtca
caacccagcagtagatcaagcagtaggtcgagttctccatcagcgactgcccgtgctgct
gctataggcattaacggcacatcaagacatagaagaaaaagtggtatccctgtgccacgt
agccaaggtgcaagtcgagaggcaagtcctagtcgattcggatttggtaagtcatcccga
gacaggcggcatagtggttcagccatgggtgcacaaagagaacctctatcacagaatcaa
attatggctcagagggtgctcactacaggatgcgatgcagaactggcacttgctgatgca
ttgaacaaagccaacagacgtcgttggaactctgagttctctgacgatgagagcgatgcc
tccagtgtgtgttcagttggttcctatggctctggccctggccgagccttggaggtgcgc
ctagccgatgttcctgaggtattagctaaaatggccagtcctgcatggtcggagagaaag
gaaggcttatttgggctgcaaattgtattacaaagttccagggtactcagtagagcagaa
attaaacgagtaactgaactatttacaagaatgtttgctgatccccacagtaaggttttc
agtctcttccttgaaacactgagtgagtttgtagcagtgcacaagacagacctatcagat
tggctatttgttcttattacaagacttctacagaagatgggctgtgatttactcggatca
gtccttcaaaaagtacaaagggcactagatgttgtcagggaatcatttccatatgaccaa
caatttagaattctcacaaggtttattgtggatcagacacaaacacccaatgctaaggtc
aagatagcattattacggttcatggagagtcttacagagctgatggatccaggtgatttt
agcaattccagtgagacaagattggctgtatcacgcatcataagctggatgaaggaggct
aagaattctgaagtcaggaggtgttcccagtcggtactgattgctttgtttgaactcaac
acaccggaattcagcatgatgttatctgtgcttcccaagtcattccaggatggcgctacc
aagctattacataatcaccttcgcaacgctaccagcattgacaacgagacttcagcagct
gacttacagatgaagaagtcaccaagatcatacctaagagtcacctccccacgttccaat
gactcctcaccacgaggaagctacgcaagcaatggtcctccagaatttgacacagagaac
atgaactctgaagacatttatgattccctacgacgtactacagctgagatacagagctac
atgtcgagtagcagggatgatcttgatggaatttataaagatggtcaccgtgtggacagt
gatgaggtatccgctgacagcgggctgatggattctatgcccgacataagagtggacagt
cccgatggcaaggtgaaggaataccttgaatttcagccgcagtcacaaacgcctccgcag
ctgctgcagcagccccagaccaatggcaagagtgcccacaatggtggtggtagtcaacca
ccaccatatttgccaacggctgcccagactcccacaccctcagagcctaaccccaactcc
aattcttcctacaatcctaccaactatcagaacaacaatggtttaactgagaccatgaac
agactggcactccaggatgctgcctacgaagatgagcaattccacgaagatgatcaaggt
gatgctttagtacccttgttaacagagctatccaaccataatgaaaggtttgaggagcgc
agaacagccatgatgcagctaattaaaatgaccagaacagagagcttgaccatgtgggat
gaccattttaaaacggtcctcctacttatgctagaaacactaggagatgtagagccctca
attcgtgctatggcattaagagtgttgagggagatattaaggaatcagccagatagattc
aaagactatgctgagcttactattctgaaaatactagaagcccataaagaccaacaatca
gaggtggtgagggcagccgaggagacatcagctacactagctaactccctagcccctgac
cagtctgtacgggtattatgccccatcatacaaacagctgaagtacctgttaaccaagct
gccattaaaatgctaaccaaggtagtggaaatcatgtcacaagcagaaattagtgaaatc
atggaagagcttatacccgtcttattaaagtcatatgaccatgccgaaagtagtatacgc
aaagccagtgtgttctgcctagtagccattcatggggtaataggggaacaacttaaattg
tatctatctgatttggctggaagtaagatgaagctattgaacctgtacatcaagcgtgcc
caagcagaaagagcaggacagccagctagtcactctccaagttcaccttcactttctact
ggaagcagatag
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