Amphiura filiformis: 140146551
Help
Entry
140146551 CDS
T10871
Name
(RefSeq) DDB1- and CUL4-associated factor 11-like
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afil04121
]
140146551
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
140146551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
B-prop_COPA_B_2nd
Beta-prop_WDR75_2nd
Cytochrom_D1
Ge1_WD40
WD40_like
Beta-prop_DCAF4
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
140146551
NCBI-ProteinID:
XP_072024526
LinkDB
All DBs
Position
2:68907843..68941004
Genome browser
AA seq
539 aa
AA seq
DB search
MGSRHASGDGGDSDDGTTSERDATRLLAMLIRSGQIRLITQDRSLDFMDDDDDDDDYEPY
IECKPEADKCPDTKAIDKSELKQQMLGQAGLKHDASLPTAVSVNRLLRKRSLGRCSQGHF
TPNDCAMLGANYLPNQMEIVARLNSKVFCGTYSKDGNVFLSACQDQYLRLYDVTKGNFQK
FREIRARDVGWSIVDTAFSPDGCYLIYSSWSECIHLCNIYGDYDTHQALNLRPGDGHFCA
FSVKFSSDNSEILAGANDGHLYIYDREKNDRILRIDAHEDDVNAVCFADDSSHIIYSGAD
DGLCKVWDRRMLGDDNATPVGILAGHQDGITYIDAKGDSRHLITNSKDQSIKLWDMRKFS
SNSTIEKCRRAVATQHWDYRWQGIPRSSRSKKKTIAGDSSLMTYRGHGVLHTLIRCYFSP
TFSTGQRYIYTGCGTGKIVIYDVLTGQIVSKLDEHHGAVRDVSWHPYEPKLMSTSWDGTH
GLWTYKKDDYPEDEDPEDSLNESSDDETDIFKVFRRKSRRLQEQRRERERRQQRTGQGF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggggtccagacatgcgagtggcgacgggggcgacagcgacgacggaacgacatcagag
agagacgcaacacgtttactcgctatgttaattcgcagtggtcagatacgtctaattact
caagacagaagcctagatttcatggatgatgatgacgatgatgatgattatgaaccatac
atagagtgcaaacctgaagctgataaatgccctgatactaaagctatcgataagagtgag
ttgaagcagcagatgctaggccaagctggtttaaaacatgatgcctcactacctactgca
gtgtctgttaacagattgttgagaaagaggtcattaggcagatgttcacaggggcacttt
actcccaatgactgtgcaatgttaggtgcaaactatttaccaaaccagatggaaattgtt
gcgaggcttaattcaaaagtgttctgtggcacctactccaaagatggcaatgtcttcctg
tctgcgtgtcaagaccagtatctaagactctatgatgtcaccaagggaaattttcagaaa
ttcagagaaattcgtgccagagatgttgggtggagtatagtggatacggccttcagtcct
gatggatgctacctcatctactccagctggtctgaatgcattcatctatgcaacatctac
ggagattacgacacccatcaagccttaaacttgcgtcctggtgacggacatttctgtgct
ttctctgtgaaattctcaagtgataactcggaaattctagctggagctaatgatggccat
ctttacatttatgacagggagaaaaatgataggattctaagaattgatgctcatgaagat
gatgtcaatgctgtgtgctttgcagacgacagctcgcatatcatttactccggcgctgat
gatggattgtgcaaagtatgggataggcgtatgcttggggacgacaatgcaactccagta
ggcatattagctggacatcaggatggcatcacatatattgacgcaaagggtgattctagg
catttgataaccaattccaaagaccagagcatcaagttgtgggacatgaggaagttttca
agtaacagtaccattgagaaatgccgtcgtgctgtggctactcaacattgggattataga
tggcagggcataccaaggagctccagatctaagaagaaaacaattgctggtgattcatcc
ttgatgacatacagaggtcatggagtactacatactcttatcagatgctatttctcaccc
acattctccactgggcagaggtacatatatactggatgtggaactggaaaaatagttata
tatgacgtgctaactgggcagatagtaagcaagcttgatgaacaccatggagctgtcaga
gatgtgtcttggcatccatatgagcctaaacttatgagcacatcatgggatggtactcat
ggtttatggacctacaaaaaagatgactacccagaggatgaagaccctgaagatagtcta
aacgaatctagcgatgatgagaccgacatatttaaagtctttcgcaggaaaagtcgcaga
ttgcaggagcagagacgagaacgagaacgaaggcaacagagaacgggtcaagggttttag
DBGET
integrated database retrieval system
