Amphiura filiformis: 140146624
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Entry
140146624 CDS
T10871
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
afil Amphiura filiformis
Pathway
afil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140146624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afil03041
]
140146624
Spliceosome [BR:
afil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140146624
Complex C
U5 SnRNP specific factors
140146624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
140146624
NCBI-ProteinID:
XP_072024593
LinkDB
All DBs
Position
2:75730886..75816404
Genome browser
AA seq
2339 aa
AA seq
DB search
MAADFAVPPGAYVHMMMQQQQQQQRIPDYMAEEKLQDKARKWQQLQSKRYAEKRKFGFVE
AQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLVENMPMPWEQIRD
VNVLYHITGAISFVNEVARVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPP
LDYADNILDVEPLEPIQMELDPEEDGPVHQWFYDHKPLMDGKCVNGTSYKSWRLTLPMMS
NLYRLANQLLTDLVDENYFYLFDLKSFFTSKALNMAIPGGPKFEPLVRDAGLQDEDWNEF
NDVNKIIIRQQIRTEYRIAFPYLYNNLPKFVELIWYHTPSVVFIKTEDPDLPAFYFDPLV
NPISHRHGVKHPEPLPDDSEEFELPEYIAPFLQDRPLYTDHTASGIALLWAPRPFHLRSG
RHRRAMDVPLVKSWYREHCPSGQPVKVRVSYQKLLKLYVLNALKHRPPKSQKKRFLFRSF
KSTKFFQSTTLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERK
KSRFGNAFHLCREILRLTKLVIDSHVQYRLGNVDAFQLADGLQYIYAHVGQLTGMYRYKY
KLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGIWAPGWRVWVFFMRGITPLLERWLGNLL
SRQFEGRHSKGVTKTVTKQRVESHYDLELRASVMHDILDMMPEGIKQNKARTILQHLSEA
WRCWKANIPWKVPGLPTPIENMILRYVKSKADWWTNTAHYNRERIRRGATVDKTVCKKNL
GRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDT
KLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGI
EFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWC
QGINNLQDVWDTTEGECNVMMESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVV
INYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVLGLHRASEMAGPPQMPNDFLQFQD
VATETSHPIRLYSRYIDRVHIFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPR
DARMRLMKHDVNLGRGVFWDLKNRLPRSITTFIWESSFVSVYSKDNPNLLFNMSGFECRI
LPKCRTTAEEFTHKDGIWNLQNEVTKERTAQCFLRVDDESMGRFHNRVRQILMASGSTTF
TKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVF
YTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWE
SEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGW
RVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFP
TWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLD
LTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHP
RKSYKMNSSCADVLLFAAYKWNVSRPSLLADSKDTMDNTTTQKYWIDVQLRWGDYDSHDI
ERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAFGNWFPGCKPLIQSAMAKIMKA
NPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEG
NLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEE
QPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVL
FNLYDDWLKTISSYTAFSRLILILRALHVNNDRTKVILKPDKTTITEPHHIWPTLTDEEW
IKVEVALKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQ
SQLTATTTRTVNKHGDEIITSTTSNYETATFSSKTEWRVRAISATNLHLRTNHIYVSSDD
IKETGYTYILPKNVLKKFITISDLRAQIAGYLYGVSPPDNPQVKEIRCIVLVPQWGTHQT
VHLPNQLPDHEFLKEMEPLGWIHTQPNELPQLSPQDVTTHAKIMADNPAWDGEKTIVITC
SFTPGSCSLTAYKLTPSGFEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQ
GSWNYNFMGVRHDSGMRFDLQLANPKEFYHEVHRPSHFLNFSTLEESEAISSDREDLYQ
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagactttgctgtgcccccaggggcctatgtacacatgatgatgcagcagcag
caacagcaacagagaatcccagattacatggctgaggaaaaactccaggacaaagctcgc
aaatggcaacagttgcagtccaaacgatatgcagagaagcgcaagtttggctttgtggag
gcgcagaaggaagacatgccaccggagcatgtgcgcaagatcatacgcgaccacggtgac
atgaccaacagaaagttcagacatgacaaaagagtgtatttgggagctctcaaatacatg
ccacatgcagtcctcaaactggttgaaaatatgcccatgccgtgggaacagattcgcgac
gtcaatgtcctctaccatattaccggagctatttcatttgtcaacgaagtggccagggtt
attgaacctgtatatattgcgcagtggggatcaatgtggataatgatgcgacgtgaaaag
cgtgacaggagacatttcaagcgcatgagattcccaccgtttgatgatgaagagccacct
ctggactacgcagacaacatcctggatgtggaacctcttgaaccgatccagatggagctg
gacccagaggaagatggacctgtgcatcagtggttctacgatcataaaccactcatggat
ggcaagtgtgtgaatggaaccagctacaagtcctggcgtctaaccctgccgatgatgtcc
aatttgtaccggctggccaaccagctcttgaccgacctggtggacgaaaactacttctat
ctctttgacctgaagtcattcttcacctccaaggcactcaacatggccatacctggagga
cccaagtttgagcctcttgtacgagatgcaggattacaggatgaggattggaatgaattc
aacgatgtgaacaagatcatcatcagacaacagatccgtacggagtacaggatagcattc
ccttatctctacaacaatctccccaaatttgtggaactcatctggtatcatactcccagt
gttgtgttcattaaaacagaggaccctgatctgccagctttctactttgatcctcttgtc
aatcctatatcacacagacatggagtcaagcatccagaacctctgccagatgacagcgaa
gagtttgagcttccagagtacatagcaccattcctgcaagacagaccactctacacagac
cacacagccagtgggatagcattgttgtgggcaccaaggccattccatctgaggtcaggg
agacatagaagagctatggatgtacctcttgtgaagagttggtacagagaacactgtccc
agtggtcaaccagtgaaggtcagagtgtcctatcagaaactactaaagttgtatgtactc
aatgcactcaaacacagaccaccaaagtcacagaagaagagattcttgttccggtcgttc
aagtcaaccaaattctttcaatcgacgacactcgactgggttgaagtgggtttgcaggtg
tgcaggcaaggatacaacatgctcaacttgttgatccatcgtaagaatctcaactacctg
catctggactacaacttcaacttgaagccagtcaagacactaacaaccaaggagcgtaag
aaatcacgtttcggtaacgcctttcacttgtgtcgtgagattctgcgtctgacaaagcta
gtgattgacagtcatgtacaatacagattaggcaatgtggatgccttccagcttgcagat
ggtttgcaatacatctacgcccatgtgggtcagctgactggtatgtaccgttacaaatac
aaactgatgagacagatccgtatgtgtaaagatctcaagcatctcatctactacagattc
aataccggtccagttggcaaaggtcccggctgcggcatctgggccccaggctggcgtgtc
tgggtgttcttcatgcgtggcatcacaccgttgctggagcgttggcttggcaacctgctg
tcacgtcagtttgaaggacgacattccaaaggagtgacaaagactgtcaccaagcagagg
gtggagagtcactatgacttggagttgcgtgcatcggtgatgcatgatatcttggacatg
atgccagagggtatcaagcagaacaaagctaggaccatcctgcaacatcttagtgaagcc
tggagatgctggaaggccaatataccatggaaggtgccaggattacctaccccaattgag
aacatgatcctcagatacgtcaagtcaaaagccgactggtggacaaacacggctcactac
aatcgtgagcgtatccgacgtggcgccaccgtggacaagacagtgtgcaagaagaatctg
ggccgactgacgaggttgtacctgaaagctgagcaggaaagacagcacaactacctgaag
gatggtccatacatcactgctgaagaagctgtagccatctataccaccaccgtgcattgg
ttggagagtaggcgtttctcacccattccattccctcctctgtcatacaaacacgacacc
aagctgctcattctagccttggaaagactcaaggaagcatacagtgtcaagtcccgtttg
aaccaatcacagagggaggaattaggtctgatagaacaggcttatgataaccctcacgaa
gccctcagcagaatcaagcgtcacttgctaacacagagagccttcaaagaggttggtata
gagttcatggatctctacagccatctgatccctgtctatgatgtagaacctttagagaag
atcacagatgcatacctagatcagtacctatggtatgaggctgacaagaggagattattc
ccaccgtggattaaaccagctgacacagaacccccaccactgttggtatacaagtggtgt
caaggcatcaataatctccaagatgtgtgggacacgacagagggcgagtgcaatgtgatg
atggagtcacgattcgagaagctttacgagaagatagatttgacgctactcaacagactg
ctgcgtctcatcgtagatcataacatcgccgattacatgacggccaaaaacaatgtggtc
atcaactacaaggacatgaaccacaccaattcttacggtatcatccgaggtctccagttc
gcctccttcattgtacagtactatggcctggtgttggatcttcttgtgttaggtctacat
agggctagtgagatggctggcccaccacagatgccaaatgacttcttgcaattccaggat
gttgccacggagaccagtcacccaattcgactctactccagatatatcgacagagttcat
attttcttcagattcagtgcggaggaagcccgggatctcattcagcgctacctgacagag
caccctgatcctaacaatgagaacattgtaggatataacaacaagaaatgttggcccaga
gatgcacggatgagacttatgaagcatgacgtcaacttgggtcgtggtgtattctgggat
ctcaagaaccgcttacccaggtctatcaccaccttcatatgggagagtagctttgtgtct
gtgtacagcaaggataatcccaacttgttattcaacatgtctggatttgagtgtcgtatc
cttcccaaatgtcgcaccacggcagaggagttcacccacaaagacggtatatggaatcta
caaaatgaggtcaccaaagagaggacagcacagtgtttcctgagagtggatgatgagtcc
atgggacgattccacaacagggtcagacagatactcatggcatcagggtcaacaaccttt
accaagattgtcaataaatggaacacagctctcattggtctgatgacctacttccgggaa
gctgtcgtcaacacccaagaactgctggaccttctggtcaaatgcgagaacaagattcaa
acacgtatcaagattggactcaactccaaaatgcctagccgttttcctcccgtggtgttc
tacacgcccaaagagttgggaggactgggtatgctgtccatgggacatgtgctcataccg
caatcagatttaaggtggtccaagcagacggatgtcggcatcactcattttcgttccggt
atgagtcacgaggaggatcaactcattcccaacttgtatcgctacatccagccatgggag
agtgagttcatcgactcacagagagtgtgggcagagtatgcgttgaagaggcaggaagct
aatgcacagaacagacgtctgactctggaggatttggaggattcctgggaccgtggtatt
ccccgtatcaacactctgttccagaaagacagacatacgttggcttatgataagggatgg
agagtcagaacagacttcaaacagtaccaggtcctgaagcagaatccattctggtggacc
caccagcgtcatgacggtaaactgtggaatctgaacaactacaggacagacatgatccag
gccctgggtggtgtggaaggcatcctggagcatacattattcaagggaacatacttccca
acatgggaaggtcttttctgggagaaggccagtggatttgaggagtcaatgaagtacaag
aaactgaccaatgcccagcgatctggtttgaaccagatccccaacagaagattcaccctg
tggtggtctcctacaatcaacagagctaatgtgtacgtgggtttccaggtccagctggat
ctcacaggcatcttcatgcacggcaaaatcccaaccctgaagatctcccttatccagata
ttcagggctcatttgtggcagaagattcacgagagtgtggtcatggacttgtgtcaggtg
tttgatcaagagttggatgcattggagattgagactgtccaaaaggaaaccatccatccc
aggaagtcttacaagatgaacagctcatgtgctgatgtcctgctgtttgctgcctacaag
tggaatgtatcaagaccgtcactgcttgctgactcaaaggatacaatggacaatacaacc
acacagaagtactggatagatgtgcagctgagatggggagactacgactctcacgatata
gaacgttatgccagagccaaattcctggactacaccacagataacatgagtatctaccca
tctccaacagggctgctgattgccatagatctggcttataacctgcatagtgcatttgga
aactggttcccgggttgcaagcctctcatccagtcggcgatggccaagattatgaaggcc
aaccctgcgctgtatgtgttgagagagcgcatccgtaaaggtctgcagctgtactcatca
gagcctactgagccgtacctgtcatcgcagaattatggcgaattgttctccaaccagatc
atttggtttgtggatgataccaatgtgtacagagtcaccattcacaagacctttgagggt
aacttaaccaccaagcccatcaatggagccatctttatcttcaatccaagaacaggacag
cttttcctcaagattatccatacctcagtatgggctggacagaaacgtcttggtcagctt
gccaagtggaagacggctgaagaagttgccgctttgatcagatctctgccagttgaggaa
cagccaaagcagatcattgtcactaggaaaggcatgttggatccacttgaggtgcattta
ctggatttccccaacattgtgatcaaaggcagtgagttgcagcttccgttccaggcatgt
ctcaaagtggagaagtttggggatttaatcctgaaggccacggaaccgcagatggtactc
ttcaatctttatgatgactggctgaagacaatctcatcgtacacggcattctcacgtctc
atcctcatattgagagcactacatgtcaacaacgatcgcaccaaagtgatcttgaagcca
gacaagacgaccatcaccgagccacatcacatctggccgacgctgactgacgaagaatgg
atcaaggttgaggtggctctgaaagatttgatcctagcggattatggcaagaagaacaat
gtcaatgtagcctccctgactcagtctgagattcgtgacatcatcttaggtatggagata
tcagcgccctcgcagcaacgacagcaaattgccgaaattgagaagcaaactaaggagcag
tcacagctgacagcaaccactactaggactgtcaataaacatggtgacgagatcatcaca
tcaacaaccagcaactacgagacggcaacgttctcctccaagacggagtggcgtgtgcga
gccatctccgctactaaccttcacctgcgtaccaatcacatctatgtgtcatcagatgac
atcaaagagacaggatacacctacatcctgcctaagaatgtcctgaaaaagttcatcacc
atctctgatttgagagcacagattgcaggttacttgtatggggtgagtccacctgataat
ccacaagtgaaagaaatcagatgtattgtgcttgtaccacaatggggaactcaccaaaca
gtacatctaccaaatcagcttcctgatcatgaattcttgaaggaaatggaaccacttggc
tggatccacactcagcccaacgagctgcctcagctctcccctcaggatgtgaccacacat
gctaagatcatggctgataacccagcttgggatggtgaaaagacgatagtcatcacatgc
agtttcaccccaggatcatgttccctgacagcctacaagctaacacccagtgggtttgaa
tggggaagacagaacacggacaaaggcaacaatcccaagggatacttgccatctcactat
gagagagtacagatgctgctatcagatagattcctgggattctttatggtcccagctcaa
ggatcatggaattataactttatgggtgtgagacatgattcaggcatgcgatttgacctt
cagctagccaacccaaaggagttctaccatgaggtgcacagaccgtcacatttcttgaat
ttctctactctggaagagagcgaggcgataagcagcgacagagaagatttgtaccagtag
DBGET
integrated database retrieval system
